Click here to switch to the map view.

The map label for this gene is ybjZ [C]

Identifier: 78222765

GI number: 78222765

Start: 1758907

End: 1760067

Strand: Reverse

Name: ybjZ [C]

Synonym: Gmet_1553

Alternate gene names: 78222765

Gene position: 1760067-1758907 (Counterclockwise)

Preceding gene: 78222766

Following gene: 78222764

Centisome position: 44.03

GC content: 62.19

Gene sequence:

>1161_bases
ATGAAACTCCACTCCATATCACTCAATAACCTGCGGCGGCGCAAAGCGAAGATGGCGTTTCTCACCATCGGCCTCATGGT
CGGCATCGCCACCATCGTCACGCTCGTGACCCTCACCGAATCCATGTCCAACGACATCGGCCGCAAGATGGACGAGTTCG
GCGCCAACATCCTCATCATGCCCCGAAGCGAGGACTTGGCCATGAGTTACGGCGGCATCAGCCTCGGCCGGGTAAGCTTC
GACCAGCAGGAGATCCATGAGGGGGACCTGGCGAGAATCCGAGAGATCAAAAACAACAAAAACATCCTCGCGGTCTCTCC
CAAGGTGCTTGGTGCGGCGACTCTGAAGGAGAAAAACGTTCTCCTCGTGGGGGTTAACTTCGCGGAAGAGCTCAAGATGA
AGCAGTGGTGGCGGATCTTCGGCGACGAGCCGAAGACTGAGAACGAAATCCTCCTCGGCAGCACCACCGCCGACACGCTC
CACCTCTCCCCCGGCGACTCGGTGACCATCGGGGGCGAGGCCCTGAAGGTGGCGGGAATCCTGGAACAGACCGGCTCCCA
GGACGACTCGCTGGTCTTCGCGCCCCTGAAAAAGGCCCAGAAGATCCTCGGCAAGGAGGACAAGATCACGCTTGTGGAAG
TGGCGGCGCTCTGCGCCGGTTGCCCCATCGGCGACATGGTCGTCCAGATCGCCGAGAAGCTTCCGGAGGCGAAGGTCACC
GCCATTCAGCAGGTGGTGGAGTCGCGGCTCAAGACCCTCGACCAGTTCAAGCGCTTCTCCTACGGGGTCGCCGGGGTGGT
GATCTTCATCGGCTCACTTATCGTCTTCGTGACCATGATGGGGAGCGTCAACGAGCGGACCACCGAGATCGGCGTCTTCC
GGGCCATCGGTTTCAGAAAGAGCCACATTATGCGGATCATCCTCCTGGAGGCGTCCCTGGTGAGCCTGCTGGCCGGCGCG
TTGGGCTATCTTTCGGGAATGGGGGCGGCCCGGCTCGCCCTCCCCTTCATGGCCGAGTCTGCCAAAGCGGCCCTTGTCTG
GGACGGACTGGTGGCGTCGGGCTCCATCGGCCTCGCCGTGACGGTGGGGCTCCTAGCGAGCCTCTATCCGGCACTCCACG
CCAGCCGTATGGACCCCACGGAAGCCCTGCGGGCACTGTAA

Upstream 100 bases:

>100_bases
CCTCCCCGCCACCAGCGACGGCAGGAACATCATCGTAAAGGCTTCCGATCTCCAGCAGGGAGCGCGCTATTTCTAATCGG
ACCGGCGAGGCATCGATACC

Downstream 100 bases:

>100_bases
CAGCGGGGACCGGGGACTAGGGACCGGACAAACGAGAATAACGGAGTATTTAACCATGGCACTCATCGAGATCAGTAATC
TAACCAAGCACTACTCCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MKLHSISLNNLRRRKAKMAFLTIGLMVGIATIVTLVTLTESMSNDIGRKMDEFGANILIMPRSEDLAMSYGGISLGRVSF
DQQEIHEGDLARIREIKNNKNILAVSPKVLGAATLKEKNVLLVGVNFAEELKMKQWWRIFGDEPKTENEILLGSTTADTL
HLSPGDSVTIGGEALKVAGILEQTGSQDDSLVFAPLKKAQKILGKEDKITLVEVAALCAGCPIGDMVVQIAEKLPEAKVT
AIQQVVESRLKTLDQFKRFSYGVAGVVIFIGSLIVFVTMMGSVNERTTEIGVFRAIGFRKSHIMRIILLEASLVSLLAGA
LGYLSGMGAARLALPFMAESAKAALVWDGLVASGSIGLAVTVGLLASLYPALHASRMDPTEALRAL

Sequences:

>Translated_386_residues
MKLHSISLNNLRRRKAKMAFLTIGLMVGIATIVTLVTLTESMSNDIGRKMDEFGANILIMPRSEDLAMSYGGISLGRVSF
DQQEIHEGDLARIREIKNNKNILAVSPKVLGAATLKEKNVLLVGVNFAEELKMKQWWRIFGDEPKTENEILLGSTTADTL
HLSPGDSVTIGGEALKVAGILEQTGSQDDSLVFAPLKKAQKILGKEDKITLVEVAALCAGCPIGDMVVQIAEKLPEAKVT
AIQQVVESRLKTLDQFKRFSYGVAGVVIFIGSLIVFVTMMGSVNERTTEIGVFRAIGFRKSHIMRIILLEASLVSLLAGA
LGYLSGMGAARLALPFMAESAKAALVWDGLVASGSIGLAVTVGLLASLYPALHASRMDPTEALRAL
>Mature_386_residues
MKLHSISLNNLRRRKAKMAFLTIGLMVGIATIVTLVTLTESMSNDIGRKMDEFGANILIMPRSEDLAMSYGGISLGRVSF
DQQEIHEGDLARIREIKNNKNILAVSPKVLGAATLKEKNVLLVGVNFAEELKMKQWWRIFGDEPKTENEILLGSTTADTL
HLSPGDSVTIGGEALKVAGILEQTGSQDDSLVFAPLKKAQKILGKEDKITLVEVAALCAGCPIGDMVVQIAEKLPEAKVT
AIQQVVESRLKTLDQFKRFSYGVAGVVIFIGSLIVFVTMMGSVNERTTEIGVFRAIGFRKSHIMRIILLEASLVSLLAGA
LGYLSGMGAARLALPFMAESAKAALVWDGLVASGSIGLAVTVGLLASLYPALHASRMDPTEALRAL

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 41505; Mature: 41505

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLHSISLNNLRRRKAKMAFLTIGLMVGIATIVTLVTLTESMSNDIGRKMDEFGANILIM
CCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
PRSEDLAMSYGGISLGRVSFDQQEIHEGDLARIREIKNNKNILAVSPKVLGAATLKEKNV
ECCCCCEEECCCEEEEECCCCHHHHCCCHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCE
LLVGVNFAEELKMKQWWRIFGDEPKTENEILLGSTTADTLHLSPGDSVTIGGEALKVAGI
EEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEECCCCCEEECCHHHHHHHH
LEQTGSQDDSLVFAPLKKAQKILGKEDKITLVEVAALCAGCPIGDMVVQIAEKLPEAKVT
HHHCCCCCCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHH
AIQQVVESRLKTLDQFKRFSYGVAGVVIFIGSLIVFVTMMGSVNERTTEIGVFRAIGFRK
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCH
SHIMRIILLEASLVSLLAGALGYLSGMGAARLALPFMAESAKAALVWDGLVASGSIGLAV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCHHCCCCCHHHH
TVGLLASLYPALHASRMDPTEALRAL
HHHHHHHHHHHHHHCCCCHHHHHHCC
>Mature Secondary Structure
MKLHSISLNNLRRRKAKMAFLTIGLMVGIATIVTLVTLTESMSNDIGRKMDEFGANILIM
CCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
PRSEDLAMSYGGISLGRVSFDQQEIHEGDLARIREIKNNKNILAVSPKVLGAATLKEKNV
ECCCCCEEECCCEEEEECCCCHHHHCCCHHHHHHHHHCCCCEEEECCHHHHHHHCCCCCE
LLVGVNFAEELKMKQWWRIFGDEPKTENEILLGSTTADTLHLSPGDSVTIGGEALKVAGI
EEEECCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEECCCCCEEECCHHHHHHHH
LEQTGSQDDSLVFAPLKKAQKILGKEDKITLVEVAALCAGCPIGDMVVQIAEKLPEAKVT
HHHCCCCCCCEEEHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHH
AIQQVVESRLKTLDQFKRFSYGVAGVVIFIGSLIVFVTMMGSVNERTTEIGVFRAIGFRK
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCH
SHIMRIILLEASLVSLLAGALGYLSGMGAARLALPFMAESAKAALVWDGLVASGSIGLAV
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCHHCCCCCHHHH
TVGLLASLYPALHASRMDPTEALRAL
HHHHHHHHHHHHHHCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]