| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is wcaL [C]
Identifier: 78222711
GI number: 78222711
Start: 1695059
End: 1696150
Strand: Direct
Name: wcaL [C]
Synonym: Gmet_1499
Alternate gene names: 78222711
Gene position: 1695059-1696150 (Clockwise)
Preceding gene: 78222710
Following gene: 78222712
Centisome position: 42.4
GC content: 47.8
Gene sequence:
>1092_bases ATGGGAATGGAACCAGATAAGAAGGTATGCATAATCGGACCGTCTCCTGACAGCCCCTATCAAGGAGGGGTTGCCACTCA TATCAGTACGTTGAAGACACTTGCCTGTTTCAAGGATGCTGAAGTCATCGATCCTGGTTCCATCCATTCCAACAATAAAA CTGGCATTGTCTCAATATTCCGCTCACTGACAGGATTGAAGCAAAGAATATTGTTGGGGCGCTTCACTCATGTTTTCGTG AACACCTCCATCTATACCGGCTCTATCATCAAGTTGCTGCTGATTCTTGCGATTTTGCCGAATGCAGACAATACAAAAAT ACATGTATTTTATCATGGAGGCAGATTCCAGTCCTTACCCGCATGGCTGTCGGTACTTCTTTCAACTCTGTGTTTGCGAC TGATGCACAAGGTACGAATGCATCACTTTTTAAGCAAAATTCAGCAGGAGGGTTTTGTACCTGTATGCAAAGGTTGTAGT GTCGGTCTGTTTGCCAATTATGCCCAGGGAGACGACATCTGGCTAAGACACTTGAAGTCCCAAAATGCTCCTCTTAAACT CCTGTTTGTGGGGCGGTTAGTGAAAGAAAAGGGAATATTCGAAGCGCTGGAGGCTTTCAACAGGCTGCATGGCGCCGACG GACAGGTTGAGTTGACGGTTGCGGGAGATGGCCCTGCTTATCCTGAACTTTCTACGATGTGCAAATATATTTCTGATGGT GCATTACGGTTTCTGGGGCATGTGTCGGGAGAGACTCTGGAACAGGCATATAGAGAAGCTGATTTGTTGGTCATTCCATC GTATCACGAAGCATTTCCCTATGCCGCAATCGAAGCCATGCGTGCCGGGTTGCCCATGATTTCTACGAGCTCGGGAGCAC TGGAGATGTTGGTCGAGGACGGGGTTACCGGTTTTAAAATCCCGCCCCGCGATGTTTCCGCACTGGAGAAGGCAATCCGC ACCATACTGGAAAATCGGGAGTTGCTCAAACCTATGTCTGATAACTGCTACGAGTATTTCAAGGCCCACTTAAGTAAATC GGCTGCAGAACAGTATTACTCCCGGCTACTTGGCACATGTACCGTTGCCTGA
Upstream 100 bases:
>100_bases ATAATGCTCGAAAAAAGTTCTCACAATTATATTCTATTGAGATGACAGCTGAGAAGTACTTACAATTATATAATGCCTGA TTTGATGACGCCAATATGGA
Downstream 100 bases:
>100_bases CTTCATGACTGCCGCAATTGTCCACAAGCTGATCCTCCTTCTTTTGGTATTCGTATATTCGTTTACCGCCCTGGTTCCTT CCACGTACTCCGCTACAAAC
Product: glycosyl transferase, group 1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 363; Mature: 362
Protein sequence:
>363_residues MGMEPDKKVCIIGPSPDSPYQGGVATHISTLKTLACFKDAEVIDPGSIHSNNKTGIVSIFRSLTGLKQRILLGRFTHVFV NTSIYTGSIIKLLLILAILPNADNTKIHVFYHGGRFQSLPAWLSVLLSTLCLRLMHKVRMHHFLSKIQQEGFVPVCKGCS VGLFANYAQGDDIWLRHLKSQNAPLKLLFVGRLVKEKGIFEALEAFNRLHGADGQVELTVAGDGPAYPELSTMCKYISDG ALRFLGHVSGETLEQAYREADLLVIPSYHEAFPYAAIEAMRAGLPMISTSSGALEMLVEDGVTGFKIPPRDVSALEKAIR TILENRELLKPMSDNCYEYFKAHLSKSAAEQYYSRLLGTCTVA
Sequences:
>Translated_363_residues MGMEPDKKVCIIGPSPDSPYQGGVATHISTLKTLACFKDAEVIDPGSIHSNNKTGIVSIFRSLTGLKQRILLGRFTHVFV NTSIYTGSIIKLLLILAILPNADNTKIHVFYHGGRFQSLPAWLSVLLSTLCLRLMHKVRMHHFLSKIQQEGFVPVCKGCS VGLFANYAQGDDIWLRHLKSQNAPLKLLFVGRLVKEKGIFEALEAFNRLHGADGQVELTVAGDGPAYPELSTMCKYISDG ALRFLGHVSGETLEQAYREADLLVIPSYHEAFPYAAIEAMRAGLPMISTSSGALEMLVEDGVTGFKIPPRDVSALEKAIR TILENRELLKPMSDNCYEYFKAHLSKSAAEQYYSRLLGTCTVA >Mature_362_residues GMEPDKKVCIIGPSPDSPYQGGVATHISTLKTLACFKDAEVIDPGSIHSNNKTGIVSIFRSLTGLKQRILLGRFTHVFVN TSIYTGSIIKLLLILAILPNADNTKIHVFYHGGRFQSLPAWLSVLLSTLCLRLMHKVRMHHFLSKIQQEGFVPVCKGCSV GLFANYAQGDDIWLRHLKSQNAPLKLLFVGRLVKEKGIFEALEAFNRLHGADGQVELTVAGDGPAYPELSTMCKYISDGA LRFLGHVSGETLEQAYREADLLVIPSYHEAFPYAAIEAMRAGLPMISTSSGALEMLVEDGVTGFKIPPRDVSALEKAIRT ILENRELLKPMSDNCYEYFKAHLSKSAAEQYYSRLLGTCTVA
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR013534 [H]
Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 39989; Mature: 39858
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMEPDKKVCIIGPSPDSPYQGGVATHISTLKTLACFKDAEVIDPGSIHSNNKTGIVSIF CCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH RSLTGLKQRILLGRFTHVFVNTSIYTGSIIKLLLILAILPNADNTKIHVFYHGGRFQSLP HHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHH AWLSVLLSTLCLRLMHKVRMHHFLSKIQQEGFVPVCKGCSVGLFANYAQGDDIWLRHLKS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEECCCCCHHHHHHHHHC QNAPLKLLFVGRLVKEKGIFEALEAFNRLHGADGQVELTVAGDGPAYPELSTMCKYISDG CCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHH ALRFLGHVSGETLEQAYREADLLVIPSYHEAFPYAAIEAMRAGLPMISTSSGALEMLVED HHHHHHHCCHHHHHHHHHCCCEEEECCHHHHCHHHHHHHHHCCCCCEECCCCHHHHHHHC GVTGFKIPPRDVSALEKAIRTILENRELLKPMSDNCYEYFKAHLSKSAAEQYYSRLLGTC CCCCCCCCCCCHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVA CCC >Mature Secondary Structure GMEPDKKVCIIGPSPDSPYQGGVATHISTLKTLACFKDAEVIDPGSIHSNNKTGIVSIF CCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHH RSLTGLKQRILLGRFTHVFVNTSIYTGSIIKLLLILAILPNADNTKIHVFYHGGRFQSLP HHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHH AWLSVLLSTLCLRLMHKVRMHHFLSKIQQEGFVPVCKGCSVGLFANYAQGDDIWLRHLKS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEECCCCCHHHHHHHHHC QNAPLKLLFVGRLVKEKGIFEALEAFNRLHGADGQVELTVAGDGPAYPELSTMCKYISDG CCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHH ALRFLGHVSGETLEQAYREADLLVIPSYHEAFPYAAIEAMRAGLPMISTSSGALEMLVED HHHHHHHCCHHHHHHHHHCCCEEEECCHHHHCHHHHHHHHHCCCCCEECCCCHHHHHHHC GVTGFKIPPRDVSALEKAIRTILENRELLKPMSDNCYEYFKAHLSKSAAEQYYSRLLGTC CCCCCCCCCCCHHHHHHHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TVA CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]