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The map label for this gene is ytcC [H]

Identifier: 78222710

GI number: 78222710

Start: 1693917

End: 1695038

Strand: Direct

Name: ytcC [H]

Synonym: Gmet_1498

Alternate gene names: 78222710

Gene position: 1693917-1695038 (Clockwise)

Preceding gene: 78222709

Following gene: 78222711

Centisome position: 42.38

GC content: 38.77

Gene sequence:

>1122_bases
ATGCCAATGAATATTGTTCAGGTTATACCAAGTTTCAATGTGGGTGGCGGTGAGTTGTTGGCGGTCAGACTTTGCGCTGA
AATTAAAAATCAAAGACCTGATTATAAAGTGACACTGATCAGCTTGTACGACCCGATACCATCTATTGTATATGACGAAG
CTCTTGCTTCTGACGCACAAATCGTAACATTGGGGAAGAAAAAAGGCTTTGATCCGTTTACGCCATTACGGATGCTTAAA
ACCCTCCGTGCCATCAAGCCGGATGTAATTCACACTCACTTGGCAGGGCTTCGCTATACACTTCTCGCAGGAGTGTTGGG
TAATTATTCCCTGAAGGTTCATACAGTTCACAACTTAGCAACTCATGAGACATTCGGATTTTTGAAGAACGTACACAGAG
TTGCTTTTAAATTCTTTTCTTGGATACCCGTATCTTTGTCCAAGGAAGTACAAGACAGCGTCAGGGATATGTATTGTTTA
GAGTCAGTTATAGTAAATAACGGGATTAAAACAAATAGCGAAATTATCAATAAAAGCAAAGAAGATATCAGAAAGCATTA
TGGACTTCCGCTTAATAGTAAAATAATTATAACAATAGGCAGGCTTTGCACACAAAAGAACCAGTTACTGTTGATAGAAT
CTTTTAATAAAGTATGTAAAAATGCTGAAAATTATACTTTGTTGATAGTCGGAGAAGATAATTTGAACGGCAGTTATAAA
AATAAGATTGATAAAATAATATCTGAATTGCCAGATATAACCAGAGAGAACCTACATCTCCTTGGTCCAAGGAAAGATAT
TCCAGAGTTGTTGATTGCTTCAGATGTTTTTGTTCTCTCATCAGATTGGGAGGGGGTGCCTTTAACGCTCCTTGAAGCCA
TGGGGTACGGTACTCCGGTCGTCTGCACATCTGTCGGTGGTATTCCGGACGTTATTGAGCACGGATTTGATGGTCTGCTC
GTTTCGAAAGGTGACTCTAAAAGTCTTGGTAATGCGATTATCGAGGTTTTATCAAACAATTCTTTTGCTTCGAGTCTTGC
CCATAATGCTCGAAAAAAGTTCTCACAATTATATTCTATTGAGATGACAGCTGAGAAGTACTTACAATTATATAATGCCT
GA

Upstream 100 bases:

>100_bases
GTAATCGCAATTTGTCTATTGTTTTTGCTTATGTTAAAGGCAATCTCTGCGGTATGACAAAGAACTCTAAAAGTATAGCC
ATGAATGCGTGATTTGAGGA

Downstream 100 bases:

>100_bases
TTTGATGACGCCAATATGGAATGGGAATGGAACCAGATAAGAAGGTATGCATAATCGGACCGTCTCCTGACAGCCCCTAT
CAAGGAGGGGTTGCCACTCA

Product: glycosyl transferase, group 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MPMNIVQVIPSFNVGGGELLAVRLCAEIKNQRPDYKVTLISLYDPIPSIVYDEALASDAQIVTLGKKKGFDPFTPLRMLK
TLRAIKPDVIHTHLAGLRYTLLAGVLGNYSLKVHTVHNLATHETFGFLKNVHRVAFKFFSWIPVSLSKEVQDSVRDMYCL
ESVIVNNGIKTNSEIINKSKEDIRKHYGLPLNSKIIITIGRLCTQKNQLLLIESFNKVCKNAENYTLLIVGEDNLNGSYK
NKIDKIISELPDITRENLHLLGPRKDIPELLIASDVFVLSSDWEGVPLTLLEAMGYGTPVVCTSVGGIPDVIEHGFDGLL
VSKGDSKSLGNAIIEVLSNNSFASSLAHNARKKFSQLYSIEMTAEKYLQLYNA

Sequences:

>Translated_373_residues
MPMNIVQVIPSFNVGGGELLAVRLCAEIKNQRPDYKVTLISLYDPIPSIVYDEALASDAQIVTLGKKKGFDPFTPLRMLK
TLRAIKPDVIHTHLAGLRYTLLAGVLGNYSLKVHTVHNLATHETFGFLKNVHRVAFKFFSWIPVSLSKEVQDSVRDMYCL
ESVIVNNGIKTNSEIINKSKEDIRKHYGLPLNSKIIITIGRLCTQKNQLLLIESFNKVCKNAENYTLLIVGEDNLNGSYK
NKIDKIISELPDITRENLHLLGPRKDIPELLIASDVFVLSSDWEGVPLTLLEAMGYGTPVVCTSVGGIPDVIEHGFDGLL
VSKGDSKSLGNAIIEVLSNNSFASSLAHNARKKFSQLYSIEMTAEKYLQLYNA
>Mature_372_residues
PMNIVQVIPSFNVGGGELLAVRLCAEIKNQRPDYKVTLISLYDPIPSIVYDEALASDAQIVTLGKKKGFDPFTPLRMLKT
LRAIKPDVIHTHLAGLRYTLLAGVLGNYSLKVHTVHNLATHETFGFLKNVHRVAFKFFSWIPVSLSKEVQDSVRDMYCLE
SVIVNNGIKTNSEIINKSKEDIRKHYGLPLNSKIIITIGRLCTQKNQLLLIESFNKVCKNAENYTLLIVGEDNLNGSYKN
KIDKIISELPDITRENLHLLGPRKDIPELLIASDVFVLSSDWEGVPLTLLEAMGYGTPVVCTSVGGIPDVIEHGFDGLLV
SKGDSKSLGNAIIEVLSNNSFASSLAHNARKKFSQLYSIEMTAEKYLQLYNA

Specific function: Involved In The Addition Of The First Glucose Residue To The Lipopolysaccharide Core. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 41414; Mature: 41282

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMNIVQVIPSFNVGGGELLAVRLCAEIKNQRPDYKVTLISLYDPIPSIVYDEALASDAQ
CCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHCCCCE
IVTLGKKKGFDPFTPLRMLKTLRAIKPDVIHTHLAGLRYTLLAGVLGNYSLKVHTVHNLA
EEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHH
THETFGFLKNVHRVAFKFFSWIPVSLSKEVQDSVRDMYCLESVIVNNGIKTNSEIINKSK
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCH
EDIRKHYGLPLNSKIIITIGRLCTQKNQLLLIESFNKVCKNAENYTLLIVGEDNLNGSYK
HHHHHHCCCCCCCEEEEEEHHHHCCCCCEEEHHHHHHHHCCCCCEEEEEEECCCCCCHHH
NKIDKIISELPDITRENLHLLGPRKDIPELLIASDVFVLSSDWEGVPLTLLEAMGYGTPV
HHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHCCEEEEECCCCCCHHHHHHHHCCCCCE
VCTSVGGIPDVIEHGFDGLLVSKGDSKSLGNAIIEVLSNNSFASSLAHNARKKFSQLYSI
EEECCCCCHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
EMTAEKYLQLYNA
HHHHHHHHHHHCC
>Mature Secondary Structure 
PMNIVQVIPSFNVGGGELLAVRLCAEIKNQRPDYKVTLISLYDPIPSIVYDEALASDAQ
CCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHCCCCE
IVTLGKKKGFDPFTPLRMLKTLRAIKPDVIHTHLAGLRYTLLAGVLGNYSLKVHTVHNLA
EEEECCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHHH
THETFGFLKNVHRVAFKFFSWIPVSLSKEVQDSVRDMYCLESVIVNNGIKTNSEIINKSK
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCH
EDIRKHYGLPLNSKIIITIGRLCTQKNQLLLIESFNKVCKNAENYTLLIVGEDNLNGSYK
HHHHHHCCCCCCCEEEEEEHHHHCCCCCEEEHHHHHHHHCCCCCEEEEEEECCCCCCHHH
NKIDKIISELPDITRENLHLLGPRKDIPELLIASDVFVLSSDWEGVPLTLLEAMGYGTPV
HHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHCCEEEEECCCCCCHHHHHHHHCCCCCE
VCTSVGGIPDVIEHGFDGLLVSKGDSKSLGNAIIEVLSNNSFASSLAHNARKKFSQLYSI
EEECCCCCHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
EMTAEKYLQLYNA
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]