| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222696
Identifier: 78222696
GI number: 78222696
Start: 1676604
End: 1679042
Strand: Reverse
Name: 78222696
Synonym: Gmet_1484
Alternate gene names: NA
Gene position: 1679042-1676604 (Counterclockwise)
Preceding gene: 78222719
Following gene: 78222695
Centisome position: 42.0
GC content: 64.45
Gene sequence:
>2439_bases TTGTCGCAATCGAACAACAATGCCTTGCACTTGTTGAATAACATCAGGACCGAGTCCGTACAGTCGGAGCCCATACCGGA CATCCTGGCCCGAATAGGTACCGAGTTGCAGAATGGAGGGGTTCGAGCCCCGTCGCTCCCCTTTGCCGCCGGCGACACCA CCGCCGGCACTGAAACCGAACTTCAGGCGGCAGTCGCCGGACAACGGGGAGACGTCGACCTTCCCCTTGCCATCGAGGAA TCGGTCTATTTTGCCGCCATCGCCCGGCGCGCCGCTGCCGGAGAAGCGCCTCGGAGCGCCGTGTCCGGTCTGGAGCGCTT TCTCTCCCGCAACCGCGAACAGGTCTGGGAGAACAGCTGGGTGCGGTTTCCCCGCCGGATGCTCTCACCCTTTGCCGATC GGGTCTTCACCGCCGATCTCAGGGCGAACAAGTCCGATCTTGCCTCGGGGGAGCGGAGCGACGCGGGACGCTTCATCGCC CTGAAAGACGGCGAACAGTGGCTTCGCCTCCCCGTAAGCTACCTCATCAAGCTGGCCCTGGCCGATGCCGCCGGCACCAG CGCCCATCCCGCCATCCGTGCCACGGGGGAGCGCCTCATGGGGCACTTCCTCAACGACAACACCTCCCCGGAGACCTTCT CGTTCCACGTGGTCACCACTGCTTCCGGCAGCGGTCCGGGCAAGGGGGTGGCCCGGGAGAAGGCCATCCGCTATCTTCTG ACGCAACTCCTGATCATGTACGCCAATACCGCCTTCGGCCTCTCCGCCAACGGACAACGGGCCATGGTTTATCTGGCACC CCATCCGCCGGTCCGCCAGAAGGAGCTGAACGGCCTCATCGCCGACTCCTTCTACCGGGATCTCTTCATGAGCCCCTGCC TTTCCGGATGGGACCGGGGGGAAGAGAAACACCGCTACATGCACCTCTGCCACCAGGTCCTCTCCCGCAGCCGCCTCAAC ACCGTGGCCAAGCTGCGCGACGCGGGGATCATCCAGAACAACCTGGTGGTGCTGCCGAGCGTCTCTGACGTAAGCCTCGC CAACAACGGCACCCACCTCTCCCTGGGAAGCCTGCGGCTGGGCGCCGCCCTCGATGATCCCTCCTCCGGGTTCACGCCCC ATCACGAGAAACACCTGGGGGATCTGGTCATCAAGGCGACGGAACACTTTCTCCCCCTCTTCGTCGGTACCTATACGGCA GCCCCCTACCGGCTCGGATTCACCGACTTTCACCCGGAGCGGGCCCTGGGATTCCTCCCCCACGAACTGGACTACACCCA CCTGCGGATGCTCTGGCGGCGGTGGCGAAAAAAGGCGCGGCTCTCCTTTTTCGGCAACGTCATCACCCCCTTCGGCCCCG AATGGCTCGACCGTTCCATCAGCAGGCTCTTCGGCCTCACCGGCGACGTCGTGCCGGACTTCCGCCTCATCGACTACCTG GTAAGCCTCCTCTCCACCACTCGCAGCCCGGCCCTGGACGGCAGGGTCGGCAACGGCGACCGGTTGCGGCGCGATCTGGC CGAGCTGGGGATATTCGACGCTCAGATGTCGGTCTATCTCCTCTGCAAGCTCCGCGAGAAGCATGTGGTGGGCTTCTCCG GCTTCGAGGGGCGCCACTACAGCCTCTTCGAGTCCTTTGAAGACGACCTGGGGGGCGCCGCCGACCTCCAGAATCTGGTC ATCCTCTTTGCCTACAAGCTCATGGCGGAAGGGAAACTGAGCCACCGGGACATCCCCGACAATCCGGTCATCGAGAGCGA GCGTCGCCAGATCTTCTTCGCCGCGGCCATGGGAGTCCCCACCATCTACATCCGCCGGGCCACCCGCAACCGGCTCCTCA GGTCGATTCTCGAACGGACGGACGGCAGCAGGCAGAGCCGGCGCTACCCGGGCTACCTTCGGGTCCGGGTGGAGGAATAC CGCCGTGCCCTGGTGCGCACCCTCATGACCGATGGCGCAGACCTGATCGAGATGCTGGGGATGAAAGAGAGGATGGAGGA ACTGACCGCGCGGCTGGAGCTCCCTGACCGCCTTACCGCGGCGGGACGGCTCACGCGGGGAATCCTGGCCGGAACCGGCA CTCGCTCGGCTATGGCAACCCCTGCCGCGGATTTCAACCGGGGGGCGGAATCGTTTTATCGGCAAGGGCTTCGCTTCAGA CACCTGAGCGAGGCCCTCGACATGCTCGAAGAACGGCTCACTGCCCTCGACCGGCAGGCGACGGAAGGTGATTCTTCGAC CGCCACACTCCTGGCTGATCTGACCGGCGGAGGCGGCGGCGCCTCCTACCTTCGGCGAGTCAGGCGCGACCTACTCGACG AAAACCTGCCGGCCGAGTCGCTGCGGACGGTCATCGCGCTGGTTATTGCCAGTATTGCGAACGATACAGAGCATGCCGCA GCACGTATCAACGCCCACAAGGTGAGGCACTTGCAATGA
Upstream 100 bases:
>100_bases GCATAGAACATTCACCTGGCGTTAACAGCAGGCATCAGGAGCCGGTAAATAGTATCTTGCAGCAATTTATGTCTCGCTAC ATACCGAACGAGAGGGCCTC
Downstream 100 bases:
>100_bases TTGACCAGCATCAATACATCGAACGTGAAAGCGGATCTGTCTGCAACGAACGACTCTTCGGCGACCGGCTGATCCGGCTC CTCTACCACGGGGCGCGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 812; Mature: 811
Protein sequence:
>812_residues MSQSNNNALHLLNNIRTESVQSEPIPDILARIGTELQNGGVRAPSLPFAAGDTTAGTETELQAAVAGQRGDVDLPLAIEE SVYFAAIARRAAAGEAPRSAVSGLERFLSRNREQVWENSWVRFPRRMLSPFADRVFTADLRANKSDLASGERSDAGRFIA LKDGEQWLRLPVSYLIKLALADAAGTSAHPAIRATGERLMGHFLNDNTSPETFSFHVVTTASGSGPGKGVAREKAIRYLL TQLLIMYANTAFGLSANGQRAMVYLAPHPPVRQKELNGLIADSFYRDLFMSPCLSGWDRGEEKHRYMHLCHQVLSRSRLN TVAKLRDAGIIQNNLVVLPSVSDVSLANNGTHLSLGSLRLGAALDDPSSGFTPHHEKHLGDLVIKATEHFLPLFVGTYTA APYRLGFTDFHPERALGFLPHELDYTHLRMLWRRWRKKARLSFFGNVITPFGPEWLDRSISRLFGLTGDVVPDFRLIDYL VSLLSTTRSPALDGRVGNGDRLRRDLAELGIFDAQMSVYLLCKLREKHVVGFSGFEGRHYSLFESFEDDLGGAADLQNLV ILFAYKLMAEGKLSHRDIPDNPVIESERRQIFFAAAMGVPTIYIRRATRNRLLRSILERTDGSRQSRRYPGYLRVRVEEY RRALVRTLMTDGADLIEMLGMKERMEELTARLELPDRLTAAGRLTRGILAGTGTRSAMATPAADFNRGAESFYRQGLRFR HLSEALDMLEERLTALDRQATEGDSSTATLLADLTGGGGGASYLRRVRRDLLDENLPAESLRTVIALVIASIANDTEHAA ARINAHKVRHLQ
Sequences:
>Translated_812_residues MSQSNNNALHLLNNIRTESVQSEPIPDILARIGTELQNGGVRAPSLPFAAGDTTAGTETELQAAVAGQRGDVDLPLAIEE SVYFAAIARRAAAGEAPRSAVSGLERFLSRNREQVWENSWVRFPRRMLSPFADRVFTADLRANKSDLASGERSDAGRFIA LKDGEQWLRLPVSYLIKLALADAAGTSAHPAIRATGERLMGHFLNDNTSPETFSFHVVTTASGSGPGKGVAREKAIRYLL TQLLIMYANTAFGLSANGQRAMVYLAPHPPVRQKELNGLIADSFYRDLFMSPCLSGWDRGEEKHRYMHLCHQVLSRSRLN TVAKLRDAGIIQNNLVVLPSVSDVSLANNGTHLSLGSLRLGAALDDPSSGFTPHHEKHLGDLVIKATEHFLPLFVGTYTA APYRLGFTDFHPERALGFLPHELDYTHLRMLWRRWRKKARLSFFGNVITPFGPEWLDRSISRLFGLTGDVVPDFRLIDYL VSLLSTTRSPALDGRVGNGDRLRRDLAELGIFDAQMSVYLLCKLREKHVVGFSGFEGRHYSLFESFEDDLGGAADLQNLV ILFAYKLMAEGKLSHRDIPDNPVIESERRQIFFAAAMGVPTIYIRRATRNRLLRSILERTDGSRQSRRYPGYLRVRVEEY RRALVRTLMTDGADLIEMLGMKERMEELTARLELPDRLTAAGRLTRGILAGTGTRSAMATPAADFNRGAESFYRQGLRFR HLSEALDMLEERLTALDRQATEGDSSTATLLADLTGGGGGASYLRRVRRDLLDENLPAESLRTVIALVIASIANDTEHAA ARINAHKVRHLQ >Mature_811_residues SQSNNNALHLLNNIRTESVQSEPIPDILARIGTELQNGGVRAPSLPFAAGDTTAGTETELQAAVAGQRGDVDLPLAIEES VYFAAIARRAAAGEAPRSAVSGLERFLSRNREQVWENSWVRFPRRMLSPFADRVFTADLRANKSDLASGERSDAGRFIAL KDGEQWLRLPVSYLIKLALADAAGTSAHPAIRATGERLMGHFLNDNTSPETFSFHVVTTASGSGPGKGVAREKAIRYLLT QLLIMYANTAFGLSANGQRAMVYLAPHPPVRQKELNGLIADSFYRDLFMSPCLSGWDRGEEKHRYMHLCHQVLSRSRLNT VAKLRDAGIIQNNLVVLPSVSDVSLANNGTHLSLGSLRLGAALDDPSSGFTPHHEKHLGDLVIKATEHFLPLFVGTYTAA PYRLGFTDFHPERALGFLPHELDYTHLRMLWRRWRKKARLSFFGNVITPFGPEWLDRSISRLFGLTGDVVPDFRLIDYLV SLLSTTRSPALDGRVGNGDRLRRDLAELGIFDAQMSVYLLCKLREKHVVGFSGFEGRHYSLFESFEDDLGGAADLQNLVI LFAYKLMAEGKLSHRDIPDNPVIESERRQIFFAAAMGVPTIYIRRATRNRLLRSILERTDGSRQSRRYPGYLRVRVEEYR RALVRTLMTDGADLIEMLGMKERMEELTARLELPDRLTAAGRLTRGILAGTGTRSAMATPAADFNRGAESFYRQGLRFRH LSEALDMLEERLTALDRQATEGDSSTATLLADLTGGGGGASYLRRVRRDLLDENLPAESLRTVIALVIASIANDTEHAAA RINAHKVRHLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 90152; Mature: 90021
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSNNNALHLLNNIRTESVQSEPIPDILARIGTELQNGGVRAPSLPFAAGDTTAGTETE CCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH LQAAVAGQRGDVDLPLAIEESVYFAAIARRAAAGEAPRSAVSGLERFLSRNREQVWENSW HHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHH VRFPRRMLSPFADRVFTADLRANKSDLASGERSDAGRFIALKDGEQWLRLPVSYLIKLAL HHHHHHHHHHHHHHHEEHHHHCCHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHH ADAAGTSAHPAIRATGERLMGHFLNDNTSPETFSFHVVTTASGSGPGKGVAREKAIRYLL HHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHH TQLLIMYANTAFGLSANGQRAMVYLAPHPPVRQKELNGLIADSFYRDLFMSPCLSGWDRG HHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCC EEKHRYMHLCHQVLSRSRLNTVAKLRDAGIIQNNLVVLPSVSDVSLANNGTHLSLGSLRL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEEECCCCCEECCCCCEEEECCEEE GAALDDPSSGFTPHHEKHLGDLVIKATEHFLPLFVGTYTAAPYRLGFTDFHPERALGFLP CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHCCCC HELDYTHLRMLWRRWRKKARLSFFGNVITPFGPEWLDRSISRLFGLTGDVVPDFRLIDYL CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHH VSLLSTTRSPALDGRVGNGDRLRRDLAELGIFDAQMSVYLLCKLREKHVVGFSGFEGRHY HHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCCCCCHH SLFESFEDDLGGAADLQNLVILFAYKLMAEGKLSHRDIPDNPVIESERRQIFFAAAMGVP HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHEEEEEECCCCC TIYIRRATRNRLLRSILERTDGSRQSRRYPGYLRVRVEEYRRALVRTLMTDGADLIEMLG EEEEEHHHHHHHHHHHHHHCCCCCHHCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHC MKERMEELTARLELPDRLTAAGRLTRGILAGTGTRSAMATPAADFNRGAESFYRQGLRFR HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHCCCHHH HLSEALDMLEERLTALDRQATEGDSSTATLLADLTGGGGGASYLRRVRRDLLDENLPAES HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHH LRTVIALVIASIANDTEHAAARINAHKVRHLQ HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure SQSNNNALHLLNNIRTESVQSEPIPDILARIGTELQNGGVRAPSLPFAAGDTTAGTETE CCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH LQAAVAGQRGDVDLPLAIEESVYFAAIARRAAAGEAPRSAVSGLERFLSRNREQVWENSW HHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHH VRFPRRMLSPFADRVFTADLRANKSDLASGERSDAGRFIALKDGEQWLRLPVSYLIKLAL HHHHHHHHHHHHHHHEEHHHHCCHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHH ADAAGTSAHPAIRATGERLMGHFLNDNTSPETFSFHVVTTASGSGPGKGVAREKAIRYLL HHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHH TQLLIMYANTAFGLSANGQRAMVYLAPHPPVRQKELNGLIADSFYRDLFMSPCLSGWDRG HHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCC EEKHRYMHLCHQVLSRSRLNTVAKLRDAGIIQNNLVVLPSVSDVSLANNGTHLSLGSLRL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCEEEEECCCCCEECCCCCEEEECCEEE GAALDDPSSGFTPHHEKHLGDLVIKATEHFLPLFVGTYTAAPYRLGFTDFHPERALGFLP CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHCCCC HELDYTHLRMLWRRWRKKARLSFFGNVITPFGPEWLDRSISRLFGLTGDVVPDFRLIDYL CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHH VSLLSTTRSPALDGRVGNGDRLRRDLAELGIFDAQMSVYLLCKLREKHVVGFSGFEGRHY HHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCCCCCHH SLFESFEDDLGGAADLQNLVILFAYKLMAEGKLSHRDIPDNPVIESERRQIFFAAAMGVP HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHEEEEEECCCCC TIYIRRATRNRLLRSILERTDGSRQSRRYPGYLRVRVEEYRRALVRTLMTDGADLIEMLG EEEEEHHHHHHHHHHHHHHCCCCCHHCCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHC MKERMEELTARLELPDRLTAAGRLTRGILAGTGTRSAMATPAADFNRGAESFYRQGLRFR HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHCCCHHH HLSEALDMLEERLTALDRQATEGDSSTATLLADLTGGGGGASYLRRVRRDLLDENLPAES HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCHHH LRTVIALVIASIANDTEHAAARINAHKVRHLQ HHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA