| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222689
Identifier: 78222689
GI number: 78222689
Start: 1666289
End: 1667371
Strand: Direct
Name: 78222689
Synonym: Gmet_1477
Alternate gene names: NA
Gene position: 1666289-1667371 (Clockwise)
Preceding gene: 78222688
Following gene: 78222690
Centisome position: 41.68
GC content: 61.03
Gene sequence:
>1083_bases ATGATCACAAATGCTGTCATTCCCCTGGCCCGAAGAGCTATGAGCACCCACCCCGCCCTCATGGGGATGGCCACCGCCAC CTCCGGTTTTATCCGGCAGATGTCCATTAAGACATTCTCCCCAAGGCTCAGGCGCAGGGAACTGGCCCTGCGGAACGAAC TGCCAAGCATCCACACGGTCCGTAACCACTTGTTCAAAGAGAAGGGACAGGGAGAGGTTCCCACTATAGTCATCGGGGGG TTCGTTCCCGATGCCACCGAGGCGGTGGAGTTCCAGCGGGAGATCTTCCGGCGCCACGGTTCCGTCTACTATATTAATTT CTCCCGCTCCGGCTTTTCGGCTCCTTTCTTTTTCGCTCAACTGGCGGACCTGATTGAAGAGTTGAACCGCAAGGGGCAGA AGCCGATCATTTTTTCCGTCAGTTTCGGCTGTAGTCTGGTGTCCCGCTTTTTCCGGGACGGTCACGACACAGGCCTCTCC ATCAGGGGGACAGTGTTGACGAGCCCGGTCCTTTGCATCGAGGATCTGGTCCGCCCCGAAGGGGAGCGGCGCGGAGGAGT CAGGATGCTGGAGAGCAACCTGAAGCGGATTCTGCGGGCTGAGACCACCAAGGGGGATGAGTTGAACCGCCAGATCGAGC GGGCTCGCCGCTGCTTCCAGGCCCTCTTTGAGGCAGGGGCCGAGAATCGGGTCCTGTCGAACCGACACCTGTCCATACGG AAAAGGATCATGGGGGTTCTGGAAAGCACTTCCTGTCTAGGCGGATACGAAAGGGTCATGGCCCTGCGGGATGCCCCGAC GACAACGGACGGCACGGTTTTCGGGGGACCGGCCCTGGTGCTCCTGGCCGAGAAGGAAGACGAACTCCTGGTTAACACCT CCCCGACGCTTGCGGCCCTTCGGGACTCGGAAATCCGCGCGCGGCTCTTCCCCCGGGGCAAGGTGCGGACGGTCATGTCC CCCGCAAGCGGCGACGCCGTGGCCCATGCCTCCCTCATCTTCCACCAGCACTGCTATAATCCCCTCATCGAGGCGTGGTA CGACAGACTCACAACGCCGCTGCGCCTGGCGGTGGTTTCGTGA
Upstream 100 bases:
>100_bases TTTCTGGCCTTCACTGCGGAGCCACAAGCTTTTTTCCCATCTGCCACTGAGTTGTAACCGGGCTCTGGCATAAGGGAAGA AAACGACGGGAGCTCCGACC
Downstream 100 bases:
>100_bases CGGCATCTTCCCCCTTCAGGGCACTGACGGCGCCGGCCCTGGATCTGATGCTGAAAAGCGGCGCCTCAGCCCTTGCCAGG AACTTCGAGTCCCGCGACTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MITNAVIPLARRAMSTHPALMGMATATSGFIRQMSIKTFSPRLRRRELALRNELPSIHTVRNHLFKEKGQGEVPTIVIGG FVPDATEAVEFQREIFRRHGSVYYINFSRSGFSAPFFFAQLADLIEELNRKGQKPIIFSVSFGCSLVSRFFRDGHDTGLS IRGTVLTSPVLCIEDLVRPEGERRGGVRMLESNLKRILRAETTKGDELNRQIERARRCFQALFEAGAENRVLSNRHLSIR KRIMGVLESTSCLGGYERVMALRDAPTTTDGTVFGGPALVLLAEKEDELLVNTSPTLAALRDSEIRARLFPRGKVRTVMS PASGDAVAHASLIFHQHCYNPLIEAWYDRLTTPLRLAVVS
Sequences:
>Translated_360_residues MITNAVIPLARRAMSTHPALMGMATATSGFIRQMSIKTFSPRLRRRELALRNELPSIHTVRNHLFKEKGQGEVPTIVIGG FVPDATEAVEFQREIFRRHGSVYYINFSRSGFSAPFFFAQLADLIEELNRKGQKPIIFSVSFGCSLVSRFFRDGHDTGLS IRGTVLTSPVLCIEDLVRPEGERRGGVRMLESNLKRILRAETTKGDELNRQIERARRCFQALFEAGAENRVLSNRHLSIR KRIMGVLESTSCLGGYERVMALRDAPTTTDGTVFGGPALVLLAEKEDELLVNTSPTLAALRDSEIRARLFPRGKVRTVMS PASGDAVAHASLIFHQHCYNPLIEAWYDRLTTPLRLAVVS >Mature_360_residues MITNAVIPLARRAMSTHPALMGMATATSGFIRQMSIKTFSPRLRRRELALRNELPSIHTVRNHLFKEKGQGEVPTIVIGG FVPDATEAVEFQREIFRRHGSVYYINFSRSGFSAPFFFAQLADLIEELNRKGQKPIIFSVSFGCSLVSRFFRDGHDTGLS IRGTVLTSPVLCIEDLVRPEGERRGGVRMLESNLKRILRAETTKGDELNRQIERARRCFQALFEAGAENRVLSNRHLSIR KRIMGVLESTSCLGGYERVMALRDAPTTTDGTVFGGPALVLLAEKEDELLVNTSPTLAALRDSEIRARLFPRGKVRTVMS PASGDAVAHASLIFHQHCYNPLIEAWYDRLTTPLRLAVVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40225; Mature: 40225
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITNAVIPLARRAMSTHPALMGMATATSGFIRQMSIKTFSPRLRRRELALRNELPSIHTV CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHH RNHLFKEKGQGEVPTIVIGGFVPDATEAVEFQREIFRRHGSVYYINFSRSGFSAPFFFAQ HHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHH LADLIEELNRKGQKPIIFSVSFGCSLVSRFFRDGHDTGLSIRGTVLTSPVLCIEDLVRPE HHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCCCCCEEEEHHHHCHHHHHHHHHCCC GERRGGVRMLESNLKRILRAETTKGDELNRQIERARRCFQALFEAGAENRVLSNRHLSIR CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH KRIMGVLESTSCLGGYERVMALRDAPTTTDGTVFGGPALVLLAEKEDELLVNTSPTLAAL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCEEEEEECCCCCEEEECCCHHHHH RDSEIRARLFPRGKVRTVMSPASGDAVAHASLIFHQHCYNPLIEAWYDRLTTPLRLAVVS CCCHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC >Mature Secondary Structure MITNAVIPLARRAMSTHPALMGMATATSGFIRQMSIKTFSPRLRRRELALRNELPSIHTV CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHH RNHLFKEKGQGEVPTIVIGGFVPDATEAVEFQREIFRRHGSVYYINFSRSGFSAPFFFAQ HHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHH LADLIEELNRKGQKPIIFSVSFGCSLVSRFFRDGHDTGLSIRGTVLTSPVLCIEDLVRPE HHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCCCCCEEEEHHHHCHHHHHHHHHCCC GERRGGVRMLESNLKRILRAETTKGDELNRQIERARRCFQALFEAGAENRVLSNRHLSIR CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH KRIMGVLESTSCLGGYERVMALRDAPTTTDGTVFGGPALVLLAEKEDELLVNTSPTLAAL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCEEEEEECCCCCEEEECCCHHHHH RDSEIRARLFPRGKVRTVMSPASGDAVAHASLIFHQHCYNPLIEAWYDRLTTPLRLAVVS CCCHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA