| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is 78222688
Identifier: 78222688
GI number: 78222688
Start: 1665443
End: 1666261
Strand: Direct
Name: 78222688
Synonym: Gmet_1476
Alternate gene names: NA
Gene position: 1665443-1666261 (Clockwise)
Preceding gene: 78222687
Following gene: 78222689
Centisome position: 41.66
GC content: 57.39
Gene sequence:
>819_bases TTGAAAACTGAGGAGGTTCTTCCGCAGAAGGAACGAGGAAGGAACGAGGGACGCTTCCCATATTGCCTCGTCCGCAGGGA GGAAACCAGGGACACTTCCCATATTATTAGGGAGTCCCTTATTTCCCCCCAGCTCCTTTCCGGCACCGCCGCCACAACCC TGGCCGCGAACAGCTTTCAGGACATCCCGGTAACCTACCTGGCCGATGTCCACGGTACCCAATCGGCCTCCATCAACATG GGCTTCACCTATGACGGCATGACGTACAGCGCCACCAACTATCTGCCCTTGCAGGGCCAGGCCATCTACAAGCCCGACTT CACCGGGTCCTACGGCTTCAACTATGGCACCCCCTATCTCGCCAATCCGGTGGACGGCACAGTCAGACTGGTTAACGCCG GGAGCCAGCCCCTCACCGTGACCGGCGTCAGCATCACGGGCGCCGATGCAGTCCGGTTCCAGATTACGGGAGGCAACCAG AACGGCAACCTTTCTCCCGGCCAATACCGGGACATCAATGTACGCTATCTGGCCAACAGCGTCGCAACCCATTCAGCCAA TGTGAACGTCAGCTACACCTACGACGGAGTTGCCAACACGCAGGACCTCGGCCTTTCCGGTCAAACCCTCTCCACGCCGG TGGCCCAGCTCTGGCTGGACGACACGATGATCGCCGAGAGGAAACGAGGGACACTTCCCATATTTAATAGGTCATTAGCC ACTCTCAACCCTAATGTATCTTCTAATTTCTGGCCTTCACTGCGGAGCCACAAGCTTTTTTCCCATCTGCCACTGAGTTG TAACCGGGCTCTGGCATAA
Upstream 100 bases:
>100_bases CAATTGTCAGGTGCTATTCGTCCTTCAATACATCGGAAATATACAGAGGAATTGTATTTGTTATTGAAGGATAAATTCGG GGGAGATAACGTAAGTCTTC
Downstream 100 bases:
>100_bases GGGAAGAAAACGACGGGAGCTCCGACCATGATCACAAATGCTGTCATTCCCCTGGCCCGAAGAGCTATGAGCACCCACCC CGCCCTCATGGGGATGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MKTEEVLPQKERGRNEGRFPYCLVRREETRDTSHIIRESLISPQLLSGTAATTLAANSFQDIPVTYLADVHGTQSASINM GFTYDGMTYSATNYLPLQGQAIYKPDFTGSYGFNYGTPYLANPVDGTVRLVNAGSQPLTVTGVSITGADAVRFQITGGNQ NGNLSPGQYRDINVRYLANSVATHSANVNVSYTYDGVANTQDLGLSGQTLSTPVAQLWLDDTMIAERKRGTLPIFNRSLA TLNPNVSSNFWPSLRSHKLFSHLPLSCNRALA
Sequences:
>Translated_272_residues MKTEEVLPQKERGRNEGRFPYCLVRREETRDTSHIIRESLISPQLLSGTAATTLAANSFQDIPVTYLADVHGTQSASINM GFTYDGMTYSATNYLPLQGQAIYKPDFTGSYGFNYGTPYLANPVDGTVRLVNAGSQPLTVTGVSITGADAVRFQITGGNQ NGNLSPGQYRDINVRYLANSVATHSANVNVSYTYDGVANTQDLGLSGQTLSTPVAQLWLDDTMIAERKRGTLPIFNRSLA TLNPNVSSNFWPSLRSHKLFSHLPLSCNRALA >Mature_272_residues MKTEEVLPQKERGRNEGRFPYCLVRREETRDTSHIIRESLISPQLLSGTAATTLAANSFQDIPVTYLADVHGTQSASINM GFTYDGMTYSATNYLPLQGQAIYKPDFTGSYGFNYGTPYLANPVDGTVRLVNAGSQPLTVTGVSITGADAVRFQITGGNQ NGNLSPGQYRDINVRYLANSVATHSANVNVSYTYDGVANTQDLGLSGQTLSTPVAQLWLDDTMIAERKRGTLPIFNRSLA TLNPNVSSNFWPSLRSHKLFSHLPLSCNRALA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29663; Mature: 29663
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTEEVLPQKERGRNEGRFPYCLVRREETRDTSHIIRESLISPQLLSGTAATTLAANSFQ CCCHHCCCHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCHHHCCCCCEEEECCCCC DIPVTYLADVHGTQSASINMGFTYDGMTYSATNYLPLQGQAIYKPDFTGSYGFNYGTPYL CCCEEEEEECCCCCCCEEEECEEECCEEECCCEEEECCCCEEECCCCCCCCCCCCCCCCC ANPVDGTVRLVNAGSQPLTVTGVSITGADAVRFQITGGNQNGNLSPGQYRDINVRYLANS CCCCCCEEEEEECCCCCEEEEEEEEECCCEEEEEEECCCCCCCCCCCCEEEEEEEEEECH VATHSANVNVSYTYDGVANTQDLGLSGQTLSTPVAQLWLDDTMIAERKRGTLPIFNRSLA HEECCCCEEEEEEECCCCCCHHCCCCCCCHHCHHHHHHHCCHHHHHHCCCCCCEECCEEE TLNPNVSSNFWPSLRSHKLFSHLPLSCNRALA EECCCCCCCCCCCHHHCHHHHCCCCCCCCCCC >Mature Secondary Structure MKTEEVLPQKERGRNEGRFPYCLVRREETRDTSHIIRESLISPQLLSGTAATTLAANSFQ CCCHHCCCHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCHHHCCCCCEEEECCCCC DIPVTYLADVHGTQSASINMGFTYDGMTYSATNYLPLQGQAIYKPDFTGSYGFNYGTPYL CCCEEEEEECCCCCCCEEEECEEECCEEECCCEEEECCCCEEECCCCCCCCCCCCCCCCC ANPVDGTVRLVNAGSQPLTVTGVSITGADAVRFQITGGNQNGNLSPGQYRDINVRYLANS CCCCCCEEEEEECCCCCEEEEEEEEECCCEEEEEEECCCCCCCCCCCCEEEEEEEEEECH VATHSANVNVSYTYDGVANTQDLGLSGQTLSTPVAQLWLDDTMIAERKRGTLPIFNRSLA HEECCCCEEEEEEECCCCCCHHCCCCCCCHHCHHHHHHHCCHHHHHHCCCCCCEECCEEE TLNPNVSSNFWPSLRSHKLFSHLPLSCNRALA EECCCCCCCCCCCHHHCHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA