| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222686
Identifier: 78222686
GI number: 78222686
Start: 1657130
End: 1657891
Strand: Direct
Name: 78222686
Synonym: Gmet_1474
Alternate gene names: NA
Gene position: 1657130-1657891 (Clockwise)
Preceding gene: 78222685
Following gene: 78222687
Centisome position: 41.45
GC content: 58.14
Gene sequence:
>762_bases ATGAACGATGTCGACCGTGTCACTGTATCCACCCCCAAACATGCAAGAATATTCCTCTTCATCGCCGCATCGCTGCTGTC GACACTCTCGCTGATGATATCCGGAGCCATTGACTGTTCAGCATCGCCCGACGCACGCGAATCCCGTTACGAGATATTCT CCCGCGGACTGCGAGTCGGCAGTCTTACAACGTCATTCTCCCACGCCAGGTACAATGACCGCAGAGCTCTCCGCTTCGAG TCCAACACCCGGGTGAAGGCGAACCTTCTGGTCTATTCCGTATCCTATGAAAGCCACGAAACGGCCCTGGTGACGGAAGA GGGGACAGTCACCTACACGCGGAGCGACCGAAGGAAGGGACAGCAGCTGGAGGCTACCGGGCGGCTCGAAAGGGATCGGT TCATCCTCGATGTGACGGAGAACGGCAACCGGCGAACCCTTCTGTTTGACAAAAGCCGCTATGACCACACAACGATGGAG TGCCCCGAAACCCTCATGGGCCGGGTAGGGGAGGAGATGTCGCTTCGTCTTCTCGACTTCGAGAGCCTCTCCATCGTTAC CCGCCGCTACCGCTGGGTCAAAACCGAGGATGTCATAGTGGAGGGAAAGCCGGTCCGCTGCCGTGTCATCGATTTTGAGG ATTCCCACAAGAAAGGACGGCGCTGGATCAAGGCCGACGACCTGGGCGTCATCATCGCCCGGCAGGACGGCAAGGGGAAG GATGGTTCCTATTCGCTGCGGATGACGAAGCTGGGGGATTGA
Upstream 100 bases:
>100_bases TTTTCGGCAAAACCCTGAAGGGACGTCAGCGTTTCGTCTGCAATAGCTGCGGCCGTGAATTCGAAACCGGTTCCCCGTCT CCGTCGAGTCGTTGCTCCCG
Downstream 100 bases:
>100_bases TACTTATTTGGGGGCATCGTTACAAAACATTTAATCAAGCTTAATGTTGATGTAATAATTATGCCTTAGGGTATGCACCC AGGAATCGGGGTGCCGTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MNDVDRVTVSTPKHARIFLFIAASLLSTLSLMISGAIDCSASPDARESRYEIFSRGLRVGSLTTSFSHARYNDRRALRFE SNTRVKANLLVYSVSYESHETALVTEEGTVTYTRSDRRKGQQLEATGRLERDRFILDVTENGNRRTLLFDKSRYDHTTME CPETLMGRVGEEMSLRLLDFESLSIVTRRYRWVKTEDVIVEGKPVRCRVIDFEDSHKKGRRWIKADDLGVIIARQDGKGK DGSYSLRMTKLGD
Sequences:
>Translated_253_residues MNDVDRVTVSTPKHARIFLFIAASLLSTLSLMISGAIDCSASPDARESRYEIFSRGLRVGSLTTSFSHARYNDRRALRFE SNTRVKANLLVYSVSYESHETALVTEEGTVTYTRSDRRKGQQLEATGRLERDRFILDVTENGNRRTLLFDKSRYDHTTME CPETLMGRVGEEMSLRLLDFESLSIVTRRYRWVKTEDVIVEGKPVRCRVIDFEDSHKKGRRWIKADDLGVIIARQDGKGK DGSYSLRMTKLGD >Mature_253_residues MNDVDRVTVSTPKHARIFLFIAASLLSTLSLMISGAIDCSASPDARESRYEIFSRGLRVGSLTTSFSHARYNDRRALRFE SNTRVKANLLVYSVSYESHETALVTEEGTVTYTRSDRRKGQQLEATGRLERDRFILDVTENGNRRTLLFDKSRYDHTTME CPETLMGRVGEEMSLRLLDFESLSIVTRRYRWVKTEDVIVEGKPVRCRVIDFEDSHKKGRRWIKADDLGVIIARQDGKGK DGSYSLRMTKLGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28958; Mature: 28958
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDVDRVTVSTPKHARIFLFIAASLLSTLSLMISGAIDCSASPDARESRYEIFSRGLRVG CCCCCEEEECCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEC SLTTSFSHARYNDRRALRFESNTRVKANLLVYSVSYESHETALVTEEGTVTYTRSDRRKG EEECCCCCCCCCCCEEEEECCCCEEEEEEEEEEEECCCCCEEEEECCCEEEEEECCCCCC QQLEATGRLERDRFILDVTENGNRRTLLFDKSRYDHTTMECPETLMGRVGEEMSLRLLDF CEECCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCCCEEEEEEC ESLSIVTRRYRWVKTEDVIVEGKPVRCRVIDFEDSHKKGRRWIKADDLGVIIARQDGKGK CHHHHHHHHHEEEECCEEEEECCCCEEEEEECCCCCHHCCCEEEECCEEEEEEECCCCCC DGSYSLRMTKLGD CCCEEEEEEECCC >Mature Secondary Structure MNDVDRVTVSTPKHARIFLFIAASLLSTLSLMISGAIDCSASPDARESRYEIFSRGLRVG CCCCCEEEECCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCEEC SLTTSFSHARYNDRRALRFESNTRVKANLLVYSVSYESHETALVTEEGTVTYTRSDRRKG EEECCCCCCCCCCCEEEEECCCCEEEEEEEEEEEECCCCCEEEEECCCEEEEEECCCCCC QQLEATGRLERDRFILDVTENGNRRTLLFDKSRYDHTTMECPETLMGRVGEEMSLRLLDF CEECCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCCCEEEEEEC ESLSIVTRRYRWVKTEDVIVEGKPVRCRVIDFEDSHKKGRRWIKADDLGVIIARQDGKGK CHHHHHHHHHEEEECCEEEEECCCCEEEEEECCCCCHHCCCEEEECCEEEEEEECCCCCC DGSYSLRMTKLGD CCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA