Click here to switch to the map view.

The map label for this gene is 78222443

Identifier: 78222443

GI number: 78222443

Start: 1384123

End: 1384557

Strand: Reverse

Name: 78222443

Synonym: Gmet_1228

Alternate gene names: NA

Gene position: 1384557-1384123 (Counterclockwise)

Preceding gene: 78222444

Following gene: 78222435

Centisome position: 34.64

GC content: 54.71

Gene sequence:

>435_bases
ATGGACAGGAAAGAGATCGAAGTTGATATCAAGGTGCCGAACCAGACCCGTTACCTGAGCCTCATCGGGAGGATCGGCGA
AGACATCGCCAAGGAACTCGACCGCTACGACGGCGACCGGGACATGCTGGCCTACCATATCAACCTTGTCCTTACGGAGG
CGATGGTAAACGCCATCAAGCACGCCAACGCCAACGACCCTGACAAGATGGTCCACGTCTACATTAATATCACTGACCAG
GACCTTCTCATCCGGGTCTTCGACGATGGCCAGGGATTCAACATCAACAGCATCCCCCCGCCCGACTTCGACCAGCTTGA
AGACCGAGGCCGGGGGATTTTTATCATCAAGCAGCTGATGGATACGGTGAAATACGAGAAGATTAACGGCGGGAATATGC
TGGAGATGACCAAGTGTCTGCGCTGCTGCCCGTGA

Upstream 100 bases:

>100_bases
GCCCCAGGTCAAGTCCATGTTCGAACTGACCCGCCTGCACCGGGTCTTCGAGATATTCGGCTCAACGGCGGAAGCACTTG
AAAACTTCTAGGGGTGAGGG

Downstream 100 bases:

>100_bases
GTTCGCCTGTCATTCGGTGCGTTTCCCCTTCTTCGTGATGATCAGCACCATCGCGAGTCCGAGAAGAAACATGGGAAAAC
TGAGCAGTTGCCCCATGGAA

Product: putative anti-sigma regulatory factor (serine/threonine protein kinase)

Products: NA

Alternate protein names: Anti-Sigma Regulatory Factor (Ser/Thr Protein Kinase; Anti-Sigma B Factor; Anti-Sigma F Factor; RsbW Protein; ATPase Histidine Kinase- DNA Gyrase B- And

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MDRKEIEVDIKVPNQTRYLSLIGRIGEDIAKELDRYDGDRDMLAYHINLVLTEAMVNAIKHANANDPDKMVHVYINITDQ
DLLIRVFDDGQGFNINSIPPPDFDQLEDRGRGIFIIKQLMDTVKYEKINGGNMLEMTKCLRCCP

Sequences:

>Translated_144_residues
MDRKEIEVDIKVPNQTRYLSLIGRIGEDIAKELDRYDGDRDMLAYHINLVLTEAMVNAIKHANANDPDKMVHVYINITDQ
DLLIRVFDDGQGFNINSIPPPDFDQLEDRGRGIFIIKQLMDTVKYEKINGGNMLEMTKCLRCCP
>Mature_144_residues
MDRKEIEVDIKVPNQTRYLSLIGRIGEDIAKELDRYDGDRDMLAYHINLVLTEAMVNAIKHANANDPDKMVHVYINITDQ
DLLIRVFDDGQGFNINSIPPPDFDQLEDRGRGIFIIKQLMDTVKYEKINGGNMLEMTKCLRCCP

Specific function: Unknown

COG id: COG2172

COG function: function code T; Anti-sigma regulatory factor (Ser/Thr protein kinase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16556; Mature: 16556

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRKEIEVDIKVPNQTRYLSLIGRIGEDIAKELDRYDGDRDMLAYHINLVLTEAMVNAIK
CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
HANANDPDKMVHVYINITDQDLLIRVFDDGQGFNINSIPPPDFDQLEDRGRGIFIIKQLM
HCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCHHHHHHCCCEEEEHHHHH
DTVKYEKINGGNMLEMTKCLRCCP
HHHHEECCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MDRKEIEVDIKVPNQTRYLSLIGRIGEDIAKELDRYDGDRDMLAYHINLVLTEAMVNAIK
CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
HANANDPDKMVHVYINITDQDLLIRVFDDGQGFNINSIPPPDFDQLEDRGRGIFIIKQLM
HCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCHHHHHHCCCEEEEHHHHH
DTVKYEKINGGNMLEMTKCLRCCP
HHHHEECCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA