| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222424
Identifier: 78222424
GI number: 78222424
Start: 1354543
End: 1355832
Strand: Reverse
Name: 78222424
Synonym: Gmet_1209
Alternate gene names: NA
Gene position: 1355832-1354543 (Counterclockwise)
Preceding gene: 78222428
Following gene: 78222423
Centisome position: 33.92
GC content: 64.88
Gene sequence:
>1290_bases ATGCCCACGAAAGCGAATACCCAAAGAAACTGGACCATCATGGTCTATCTCGCCGGCGACAACAACCTGGACAGCGCCGG CGTAGTGGACCTGAAGGAGATGAAGACGGTGGGGACGACCGACAAGATCGCCGTCCTTGCCCAGTTCGACCGGGCCGGTG CCAAGCAGGCAACCATCCGCTACTGTCTGAAACAGGGGACCCCCTTGGCCAAGGATGCGGTGCAGTCCCTCGGGGAGACC AACATGGGAGACCCGAAGGTGCTGGAGGATTTCGTCACCTGGGGGGTCGCCAACTACCCGGCCGACCACTACCTGCTGGT CCTCTGGAACCACGGCGCCGGGTGGGACGATGCCAACCTCTACCAGGGGGATGTCTTCAGCGGGGCCGCGCCCCCCGTCT CCCGCAAGGCCCAGCCCGTTGCCACCCGCGGGGCAACCGCCGGAGCCAAGGCGATTCCCCTGGCACAGGCCCGGGCCGGC ATCAGGCGTGCCCGCCGCGCCCTCTTCAGCACCACGGTGGAAGCCGCCATCAAGCAGCGGGGAATCGCCTTCGACGACCA GGCCCAGGACTTCCTCGACAACATCGAGCTGAAAAGGGTGCTGACCGCCATCAAGAAGAAACTCAAGAGAAAGATCGACA TCGTCGGCATGGATGCCTGCCTCATGAGCATGGCCGAGGTAGCCTACCAGATGCGCGACGTGGCCGACTACAGCGTCGGT TCCGAAGAGACCGAGCCCGGCGACGGGTGGCCCTACGACCGCATCCTCAAGGCCCTGGCCGCCAAGCCGGCCATGACCCC GGAAGAACTCTCGAAAACCATCGTCGCCCAGTACCTGGCCTCCTACAAGGCCACTGAAAACGTCACCCAGTCGGCCATGA AGCTCTTGGCGCTCAACCCCCTCGCCACGGCCGTGGACGGCATGGCAAAGGCCCTGACGGGAATCCTGGGCGACACCGCC GCCCGCACCGCCCTCATCAACGCCCGGTCACAGGTGCAGGAGTACAGCCGCCCCTATGACGACTACTGCGACCTCCTCGA TCTCTGCGACCTGATCGGCAAAGGGGTCGCCAGCCCGGCGGTCAAAACCGCCTGCGCCAAGGTCAAGGATGCCGCCGCCG CTGCCATCGTTGCCGCCGGGTACAAGGGAACGGGCGTGGACAACTCCGGGGGGATCTCCATCTACTTCCCCAAGAGGAAG CTCTCGCCCCTCTACAAGACCCTGGACTTCACCAAGAAGACCGCATGGGACGAATTCCTGGCGGCCTATCTGGCGGGGCT GGGGCGGTAG
Upstream 100 bases:
>100_bases TCCCTTGTCGCTGCGCCCATGGCGGCTATACTCTAACAAACCATAAATTTCCCCAATGAACGGACAACTCGCTGCCAATC ACAACCATGAGGAGGACACC
Downstream 100 bases:
>100_bases CACCGACTCGCCCGTAGCCTGAGGGGACGGCGTTCGCCAGGAGGAAGAACAATGAGCATACTCTGGTTTCTGCTGATCGG AATAGCCGCCGGCTGGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: Clostripain-Related Protein; FHA Domain-Containing Protein; Forkhead-Associated Protein; APHP Domain Protein
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MPTKANTQRNWTIMVYLAGDNNLDSAGVVDLKEMKTVGTTDKIAVLAQFDRAGAKQATIRYCLKQGTPLAKDAVQSLGET NMGDPKVLEDFVTWGVANYPADHYLLVLWNHGAGWDDANLYQGDVFSGAAPPVSRKAQPVATRGATAGAKAIPLAQARAG IRRARRALFSTTVEAAIKQRGIAFDDQAQDFLDNIELKRVLTAIKKKLKRKIDIVGMDACLMSMAEVAYQMRDVADYSVG SEETEPGDGWPYDRILKALAAKPAMTPEELSKTIVAQYLASYKATENVTQSAMKLLALNPLATAVDGMAKALTGILGDTA ARTALINARSQVQEYSRPYDDYCDLLDLCDLIGKGVASPAVKTACAKVKDAAAAAIVAAGYKGTGVDNSGGISIYFPKRK LSPLYKTLDFTKKTAWDEFLAAYLAGLGR
Sequences:
>Translated_429_residues MPTKANTQRNWTIMVYLAGDNNLDSAGVVDLKEMKTVGTTDKIAVLAQFDRAGAKQATIRYCLKQGTPLAKDAVQSLGET NMGDPKVLEDFVTWGVANYPADHYLLVLWNHGAGWDDANLYQGDVFSGAAPPVSRKAQPVATRGATAGAKAIPLAQARAG IRRARRALFSTTVEAAIKQRGIAFDDQAQDFLDNIELKRVLTAIKKKLKRKIDIVGMDACLMSMAEVAYQMRDVADYSVG SEETEPGDGWPYDRILKALAAKPAMTPEELSKTIVAQYLASYKATENVTQSAMKLLALNPLATAVDGMAKALTGILGDTA ARTALINARSQVQEYSRPYDDYCDLLDLCDLIGKGVASPAVKTACAKVKDAAAAAIVAAGYKGTGVDNSGGISIYFPKRK LSPLYKTLDFTKKTAWDEFLAAYLAGLGR >Mature_428_residues PTKANTQRNWTIMVYLAGDNNLDSAGVVDLKEMKTVGTTDKIAVLAQFDRAGAKQATIRYCLKQGTPLAKDAVQSLGETN MGDPKVLEDFVTWGVANYPADHYLLVLWNHGAGWDDANLYQGDVFSGAAPPVSRKAQPVATRGATAGAKAIPLAQARAGI RRARRALFSTTVEAAIKQRGIAFDDQAQDFLDNIELKRVLTAIKKKLKRKIDIVGMDACLMSMAEVAYQMRDVADYSVGS EETEPGDGWPYDRILKALAAKPAMTPEELSKTIVAQYLASYKATENVTQSAMKLLALNPLATAVDGMAKALTGILGDTAA RTALINARSQVQEYSRPYDDYCDLLDLCDLIGKGVASPAVKTACAKVKDAAAAAIVAAGYKGTGVDNSGGISIYFPKRKL SPLYKTLDFTKKTAWDEFLAAYLAGLGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46134; Mature: 46003
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTKANTQRNWTIMVYLAGDNNLDSAGVVDLKEMKTVGTTDKIAVLAQFDRAGAKQATIR CCCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCHHHHHH YCLKQGTPLAKDAVQSLGETNMGDPKVLEDFVTWGVANYPADHYLLVLWNHGAGWDDANL HHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCC YQGDVFSGAAPPVSRKAQPVATRGATAGAKAIPLAQARAGIRRARRALFSTTVEAAIKQR CCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC GIAFDDQAQDFLDNIELKRVLTAIKKKLKRKIDIVGMDACLMSMAEVAYQMRDVADYSVG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC SEETEPGDGWPYDRILKALAAKPAMTPEELSKTIVAQYLASYKATENVTQSAMKLLALNP CCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH LATAVDGMAKALTGILGDTAARTALINARSQVQEYSRPYDDYCDLLDLCDLIGKGVASPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHH VKTACAKVKDAAAAAIVAAGYKGTGVDNSGGISIYFPKRKLSPLYKTLDFTKKTAWDEFL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHH AAYLAGLGR HHHHHHCCC >Mature Secondary Structure PTKANTQRNWTIMVYLAGDNNLDSAGVVDLKEMKTVGTTDKIAVLAQFDRAGAKQATIR CCCCCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCHHHHHH YCLKQGTPLAKDAVQSLGETNMGDPKVLEDFVTWGVANYPADHYLLVLWNHGAGWDDANL HHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCC YQGDVFSGAAPPVSRKAQPVATRGATAGAKAIPLAQARAGIRRARRALFSTTVEAAIKQR CCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC GIAFDDQAQDFLDNIELKRVLTAIKKKLKRKIDIVGMDACLMSMAEVAYQMRDVADYSVG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC SEETEPGDGWPYDRILKALAAKPAMTPEELSKTIVAQYLASYKATENVTQSAMKLLALNP CCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH LATAVDGMAKALTGILGDTAARTALINARSQVQEYSRPYDDYCDLLDLCDLIGKGVASPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHH VKTACAKVKDAAAAAIVAAGYKGTGVDNSGGISIYFPKRKLSPLYKTLDFTKKTAWDEFL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHH AAYLAGLGR HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA