| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is ygjT [C]
Identifier: 78222371
GI number: 78222371
Start: 1281365
End: 1282300
Strand: Reverse
Name: ygjT [C]
Synonym: Gmet_1155
Alternate gene names: 78222371
Gene position: 1282300-1281365 (Counterclockwise)
Preceding gene: 78222372
Following gene: 78222368
Centisome position: 32.08
GC content: 55.02
Gene sequence:
>936_bases ATGTCACTGCAAACCATGATGTGGCTCGGATTCGGGGCGATCATCCTCGTGATGTTCGTCATCGACCTGGGAGTTTTCAG CCGCAAGAGCCACGAGATCAGATTCCGCGAGGCCCTCACCTGGACCATCGTCTGGGTTTCCCTGGCATTGGCCTTCAACG TCTGGATCTATTTCGAGATGGGTTCCACGAAGGCGCTGGAGTTCTTCACCGGCTACCTGATCGAGCAGTCCCTGTCGGTG GATAACCTCTTCGTTTTCATCATGATTTTCTCCTACTTCCACATCACGAAGGTCCACCAGCCCAAGATACTGAAATGGGG GATCATCGGTGCGCTCATAATGCGGGCCATCTTCATCATGACCGGCATCGAACTGATCGAGCGGTTTCACTGGATCATCT ACCTCTTCGGTGGGATTCTCGTAGTGACGGGCTTCAAGATGGCCTTTGGGGGGGACGAAAAGATCGATCCGGAGAAAAAC TTCCTTATCCGGCTCGTACGGAAGTTTGTGCCAGTCACCAAGCGAGTCCGTGATGACCGTTTTTTCATCAACAAGGGGGG AATCCGGGCGGCCACGCCGCTTTTTCTGACCCTGGTCATGATCGAGTCCAGCGACCTGATCTTTGCCGTCGACTCGATTC CCGCTGTCCTGGCGGTAAGCCATGACCCCTTCATCGTCTACACATCAAACGTGTTCGCGATCATGGGCTTGCGGTCCCTC TACTATCTCCTCTCCAACGTCATGGAGATGTTCGTCTACCTCAAGTTGGGCGTTTCCATCATCCTGGTCTACGTGGGGGC GAAGATGCTCTTGGTGGATGTCTACCAGATTCCCATCATTTTCTCTCTCGGCACCATCGTGGGAGTGCTCGCCATCTCCA TCCTCATCTCGGTCACCATCGGCAACCGCCGGGCCAAAGCGGCGCATCGGGCCTGA
Upstream 100 bases:
>100_bases AGATGGCTTACAACAGAACCTTCTGACGCACTTCCCCGTGGGGACGGTAACGGGCCGTCCCCGCCTCCTCTACCACGACT ACCATCCACGGAGAATTTAC
Downstream 100 bases:
>100_bases TATCGACACTTCACCGGAAGGCGTCCATACCGTAGGGGCAATTCATGAATTGCCCCTACCCTCCCCCGTTTCCACCTCAT CCCGATACATCTCGAACAGT
Product: integral membrane protein TerC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 311; Mature: 310
Protein sequence:
>311_residues MSLQTMMWLGFGAIILVMFVIDLGVFSRKSHEIRFREALTWTIVWVSLALAFNVWIYFEMGSTKALEFFTGYLIEQSLSV DNLFVFIMIFSYFHITKVHQPKILKWGIIGALIMRAIFIMTGIELIERFHWIIYLFGGILVVTGFKMAFGGDEKIDPEKN FLIRLVRKFVPVTKRVRDDRFFINKGGIRAATPLFLTLVMIESSDLIFAVDSIPAVLAVSHDPFIVYTSNVFAIMGLRSL YYLLSNVMEMFVYLKLGVSIILVYVGAKMLLVDVYQIPIIFSLGTIVGVLAISILISVTIGNRRAKAAHRA
Sequences:
>Translated_311_residues MSLQTMMWLGFGAIILVMFVIDLGVFSRKSHEIRFREALTWTIVWVSLALAFNVWIYFEMGSTKALEFFTGYLIEQSLSV DNLFVFIMIFSYFHITKVHQPKILKWGIIGALIMRAIFIMTGIELIERFHWIIYLFGGILVVTGFKMAFGGDEKIDPEKN FLIRLVRKFVPVTKRVRDDRFFINKGGIRAATPLFLTLVMIESSDLIFAVDSIPAVLAVSHDPFIVYTSNVFAIMGLRSL YYLLSNVMEMFVYLKLGVSIILVYVGAKMLLVDVYQIPIIFSLGTIVGVLAISILISVTIGNRRAKAAHRA >Mature_310_residues SLQTMMWLGFGAIILVMFVIDLGVFSRKSHEIRFREALTWTIVWVSLALAFNVWIYFEMGSTKALEFFTGYLIEQSLSVD NLFVFIMIFSYFHITKVHQPKILKWGIIGALIMRAIFIMTGIELIERFHWIIYLFGGILVVTGFKMAFGGDEKIDPEKNF LIRLVRKFVPVTKRVRDDRFFINKGGIRAATPLFLTLVMIESSDLIFAVDSIPAVLAVSHDPFIVYTSNVFAIMGLRSLY YLLSNVMEMFVYLKLGVSIILVYVGAKMLLVDVYQIPIIFSLGTIVGVLAISILISVTIGNRRAKAAHRA
Specific function: Unknown
COG id: COG0861
COG function: function code P; Membrane protein TerC, possibly involved in tellurium resistance
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the terC family [H]
Homologues:
Organism=Escherichia coli, GI48994922, Length=310, Percent_Identity=44.1935483870968, Blast_Score=271, Evalue=4e-74,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005496 - InterPro: IPR022369 [H]
Pfam domain/function: PF03741 TerC [H]
EC number: NA
Molecular weight: Translated: 35350; Mature: 35219
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLQTMMWLGFGAIILVMFVIDLGVFSRKSHEIRFREALTWTIVWVSLALAFNVWIYFEM CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEE GSTKALEFFTGYLIEQSLSVDNLFVFIMIFSYFHITKVHQPKILKWGIIGALIMRAIFIM CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH TGIELIERFHWIIYLFGGILVVTGFKMAFGGDEKIDPEKNFLIRLVRKFVPVTKRVRDDR HHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCE FFINKGGIRAATPLFLTLVMIESSDLIFAVDSIPAVLAVSHDPFIVYTSNVFAIMGLRSL EEEECCCCCHHHHHHHHHHHEECCCEEEEECCCCEEEEECCCCEEEEECCHHHHHHHHHH YYLLSNVMEMFVYLKLGVSIILVYVGAKMLLVDVYQIPIIFSLGTIVGVLAISILISVTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE GNRRAKAAHRA CCCHHHHCCCC >Mature Secondary Structure SLQTMMWLGFGAIILVMFVIDLGVFSRKSHEIRFREALTWTIVWVSLALAFNVWIYFEM CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEE GSTKALEFFTGYLIEQSLSVDNLFVFIMIFSYFHITKVHQPKILKWGIIGALIMRAIFIM CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH TGIELIERFHWIIYLFGGILVVTGFKMAFGGDEKIDPEKNFLIRLVRKFVPVTKRVRDDR HHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCE FFINKGGIRAATPLFLTLVMIESSDLIFAVDSIPAVLAVSHDPFIVYTSNVFAIMGLRSL EEEECCCCCHHHHHHHHHHHEECCCEEEEECCCCEEEEECCCCEEEEECCHHHHHHHHHH YYLLSNVMEMFVYLKLGVSIILVYVGAKMLLVDVYQIPIIFSLGTIVGVLAISILISVTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE GNRRAKAAHRA CCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA