| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222316
Identifier: 78222316
GI number: 78222316
Start: 1221630
End: 1222244
Strand: Reverse
Name: 78222316
Synonym: Gmet_1098
Alternate gene names: NA
Gene position: 1222244-1221630 (Counterclockwise)
Preceding gene: 78222334
Following gene: 78222315
Centisome position: 30.58
GC content: 58.37
Gene sequence:
>615_bases ATGGACTACCGGATCAACGAGCTCATCGAACGGATCAAGGCTCTCGAAGAAGAACTTGAAACCGAATTCGAAAAAAAACG TGAGGAGTTCCATCTCATCGTCGAGGAGAAGCGGGTCCGCTTTGCCCGGGAGGTGGTGGAACAGCAGCGGCGGCTCAAGA CGGGGGCGCTCCGCTACATCGCCGAAGCCCAACCCCTGGCCCTCCTGAGTGCACCGATCATCTACGCCGGCTTTATCCCG TTTCTCCTCCTTGACTTCTTCATCACCACTTACCAGGCGATCTGCTTCCCCATCTACGGCATCCCCAAGGTGCGCCGTCG CGACTACCTTGTCTTCGACCGAGAAGACCTCCCCTACCTGAACGTGATCGAAAAGTTCAACTGCTTTTACTGCTCGTACG CTAACGGCCTTGCCACCTATCTGCGGGAGGTGGCGGCCCGCACGGAGCAGTACTGGTGCCCCATCAAGCACGCCCGGCGC ATCCTGGCCCCCCACACCCGCTACAGCCGCTTCTTCGAGTACGGCGACGCCGAGAGTTTCCGCAAGGGACTGGAACGACT GAGAGCCGAATTTGAACGGAACAACGGCAAAAACGGCAAGAAGGGGGAAAGATAG
Upstream 100 bases:
>100_bases GCATCGTCGTCCACCGGGGTACCGCGCGGATTCGGCAAATCCTCGCGACAAGCGGGGCGGTTTCGGGTATAACAACACCT TCAAGCCCAAAGGAGCCCCC
Downstream 100 bases:
>100_bases CCATGTTCCTGCTGGCCTACCTGGCCCTCGGCGCCTTTGCCGGCGTCCTGGCGGGGCTTCTCGGCGTGGGGGGAGGAATC GTCATCGTGCCGGCCCTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MDYRINELIERIKALEEELETEFEKKREEFHLIVEEKRVRFAREVVEQQRRLKTGALRYIAEAQPLALLSAPIIYAGFIP FLLLDFFITTYQAICFPIYGIPKVRRRDYLVFDREDLPYLNVIEKFNCFYCSYANGLATYLREVAARTEQYWCPIKHARR ILAPHTRYSRFFEYGDAESFRKGLERLRAEFERNNGKNGKKGER
Sequences:
>Translated_204_residues MDYRINELIERIKALEEELETEFEKKREEFHLIVEEKRVRFAREVVEQQRRLKTGALRYIAEAQPLALLSAPIIYAGFIP FLLLDFFITTYQAICFPIYGIPKVRRRDYLVFDREDLPYLNVIEKFNCFYCSYANGLATYLREVAARTEQYWCPIKHARR ILAPHTRYSRFFEYGDAESFRKGLERLRAEFERNNGKNGKKGER >Mature_204_residues MDYRINELIERIKALEEELETEFEKKREEFHLIVEEKRVRFAREVVEQQRRLKTGALRYIAEAQPLALLSAPIIYAGFIP FLLLDFFITTYQAICFPIYGIPKVRRRDYLVFDREDLPYLNVIEKFNCFYCSYANGLATYLREVAARTEQYWCPIKHARR ILAPHTRYSRFFEYGDAESFRKGLERLRAEFERNNGKNGKKGER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24441; Mature: 24441
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYRINELIERIKALEEELETEFEKKREEFHLIVEEKRVRFAREVVEQQRRLKTGALRYI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEAQPLALLSAPIIYAGFIPFLLLDFFITTYQAICFPIYGIPKVRRRDYLVFDREDLPYL HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEECCCCCCHH NVIEKFNCFYCSYANGLATYLREVAARTEQYWCPIKHARRILAPHTRYSRFFEYGDAESF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHCCCHHHH RKGLERLRAEFERNNGKNGKKGER HHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MDYRINELIERIKALEEELETEFEKKREEFHLIVEEKRVRFAREVVEQQRRLKTGALRYI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEAQPLALLSAPIIYAGFIPFLLLDFFITTYQAICFPIYGIPKVRRRDYLVFDREDLPYL HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEECCCCCCHH NVIEKFNCFYCSYANGLATYLREVAARTEQYWCPIKHARRILAPHTRYSRFFEYGDAESF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHCCCHHHH RKGLERLRAEFERNNGKNGKKGER HHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA