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The map label for this gene is 78222285

Identifier: 78222285

GI number: 78222285

Start: 1189036

End: 1189890

Strand: Direct

Name: 78222285

Synonym: Gmet_1067

Alternate gene names: NA

Gene position: 1189036-1189890 (Clockwise)

Preceding gene: 78222284

Following gene: 78222286

Centisome position: 29.75

GC content: 56.26

Gene sequence:

>855_bases
ATGACCATTCAGAACCGCTATGACTTTGTACTGTTTTTCGACGTGAAGGACGGCAACCCCAACGGCGACCCTGACGCCGG
CAACCTTCCCCGCATTGATCCGGAAACCGGCCATGGGCTGGTGACGGACGTCTGCCTGAAGCGGAAAGTGCGGAACTACG
TTCAATTGGATAAGGAGCTGTCGCAGGGGTATGACATCTTTGTCAAAGAGAAGGCGATTCTCAACAACCTGATTGATGAG
GCCCACGAACAGGAAAACGTAAAGGCAAAGGAAAAGGGTGAAAAAACCGAGGCCGCTCGGCAGTTCATGTGTGGCAAATA
CTTCGACGTTCGGACTTTTGGTGCGGTCATGTCCACCGGCAAGAACGCAGGCCAGGTTCGTGGCCCGGTCCAGTTGACCT
TTGCCCGCAGCGTCGACCAGATCGTGCCGCTGGAGCACAGCATCACCCGCATGGCAGTGGCAACTCCTGCCGAGGCTGAG
AAGCAGGATGGGGATAACCGCACCATGGGACGCAAATTTACCGTCCCCTATGCCCTCTATCGTTGCCACGGCTTCATTTC
TGCACCGCTGGCGGCCCAGACCGGTTTCAGCGAGGAAGACCTTGAACTTTTCTGGCAGTCATTGGTCAACATGTTCGAAC
ACGATCGCTCGGCGGCCCGCGGCCAGATGTCGGCCCGCAAGCTGATCGTCTTCAAGCATGACTCTAAAATGGGGAACGCT
CCGGCACACCACCTCTTTGATCTGGTCTCTGCCGAGGCATCAGAGACGCCAGTCCGCAGCTTCGATCAGTACGATATCTG
TGTGCCCACTCAGGAGAATATGCCGACAGGTGTGACGGTCGTCGAGAAGTTGTAA

Upstream 100 bases:

>100_bases
GGACCAGGGGCGCTTTGCTGTTGGCTACTATCATCAGCGCCAGGATTTTTTCAAAAAGAACGAAACCACAACCAACGTGA
ATCCATAGGAGGAGATGACC

Downstream 100 bases:

>100_bases
TGTTCTCTCGTAGGGGCAATTCATGAATTGCCCCTACACACCTACGGACATGCTGTAAATTGCCCCTATGCATCATCGAC
ATACCAACCAATAACCTGGG

Product: CRISPR-associated Csh2 family protein

Products: NA

Alternate protein names: CRISPR-Associated Protein Csh2 Family; CRISPR-Associated Csh2 Family Protein; CRISPR-Associated Csd2 Family Protein; CRISPR-Associated Protein; Csd2 Family CRISPR-Associated Protein; Crispr-Associated Protein; Cytoplasmic Protein; Crispr-Associated Protein Csh2 Family; Crispr-Protein; Csh2 Family CRISPR-Associated Protein; CRISPR-Associated RAMP Csd3 Family Protein; CRISPR-Associated RAMP Protein Cmr1 Family; Cas2 Family CRISPR-Associated Protein; Csh Crispr-Associated Protein Csh2 Family; CRISPR-Associated Protein Csd3 Family

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MTIQNRYDFVLFFDVKDGNPNGDPDAGNLPRIDPETGHGLVTDVCLKRKVRNYVQLDKELSQGYDIFVKEKAILNNLIDE
AHEQENVKAKEKGEKTEAARQFMCGKYFDVRTFGAVMSTGKNAGQVRGPVQLTFARSVDQIVPLEHSITRMAVATPAEAE
KQDGDNRTMGRKFTVPYALYRCHGFISAPLAAQTGFSEEDLELFWQSLVNMFEHDRSAARGQMSARKLIVFKHDSKMGNA
PAHHLFDLVSAEASETPVRSFDQYDICVPTQENMPTGVTVVEKL

Sequences:

>Translated_284_residues
MTIQNRYDFVLFFDVKDGNPNGDPDAGNLPRIDPETGHGLVTDVCLKRKVRNYVQLDKELSQGYDIFVKEKAILNNLIDE
AHEQENVKAKEKGEKTEAARQFMCGKYFDVRTFGAVMSTGKNAGQVRGPVQLTFARSVDQIVPLEHSITRMAVATPAEAE
KQDGDNRTMGRKFTVPYALYRCHGFISAPLAAQTGFSEEDLELFWQSLVNMFEHDRSAARGQMSARKLIVFKHDSKMGNA
PAHHLFDLVSAEASETPVRSFDQYDICVPTQENMPTGVTVVEKL
>Mature_283_residues
TIQNRYDFVLFFDVKDGNPNGDPDAGNLPRIDPETGHGLVTDVCLKRKVRNYVQLDKELSQGYDIFVKEKAILNNLIDEA
HEQENVKAKEKGEKTEAARQFMCGKYFDVRTFGAVMSTGKNAGQVRGPVQLTFARSVDQIVPLEHSITRMAVATPAEAEK
QDGDNRTMGRKFTVPYALYRCHGFISAPLAAQTGFSEEDLELFWQSLVNMFEHDRSAARGQMSARKLIVFKHDSKMGNAP
AHHLFDLVSAEASETPVRSFDQYDICVPTQENMPTGVTVVEKL

Specific function: Unknown

COG id: COG3649

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31822; Mature: 31691

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIQNRYDFVLFFDVKDGNPNGDPDAGNLPRIDPETGHGLVTDVCLKRKVRNYVQLDKEL
CCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SQGYDIFVKEKAILNNLIDEAHEQENVKAKEKGEKTEAARQFMCGKYFDVRTFGAVMSTG
HCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHCC
KNAGQVRGPVQLTFARSVDQIVPLEHSITRMAVATPAEAEKQDGDNRTMGRKFTVPYALY
CCCCCCCCCEEEEEHHHHHHHCCCHHHHHHHHCCCCCHHHHCCCCCCCCCCEECCHHHHH
RCHGFISAPLAAQTGFSEEDLELFWQSLVNMFEHDRSAARGQMSARKLIVFKHDSKMGNA
HHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCC
PAHHLFDLVSAEASETPVRSFDQYDICVPTQENMPTGVTVVEKL
HHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEECC
>Mature Secondary Structure 
TIQNRYDFVLFFDVKDGNPNGDPDAGNLPRIDPETGHGLVTDVCLKRKVRNYVQLDKEL
CCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SQGYDIFVKEKAILNNLIDEAHEQENVKAKEKGEKTEAARQFMCGKYFDVRTFGAVMSTG
HCCCEEEEEHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHCC
KNAGQVRGPVQLTFARSVDQIVPLEHSITRMAVATPAEAEKQDGDNRTMGRKFTVPYALY
CCCCCCCCCEEEEEHHHHHHHCCCHHHHHHHHCCCCCHHHHCCCCCCCCCCEECCHHHHH
RCHGFISAPLAAQTGFSEEDLELFWQSLVNMFEHDRSAARGQMSARKLIVFKHDSKMGNA
HHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCC
PAHHLFDLVSAEASETPVRSFDQYDICVPTQENMPTGVTVVEKL
HHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA