| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222237
Identifier: 78222237
GI number: 78222237
Start: 1132673
End: 1133278
Strand: Direct
Name: 78222237
Synonym: Gmet_1017
Alternate gene names: NA
Gene position: 1132673-1133278 (Clockwise)
Preceding gene: 78222236
Following gene: 78222238
Centisome position: 28.34
GC content: 50.66
Gene sequence:
>606_bases ATGATGGCAATAACCTTCAGGACATGGGTGCGAGCAGAATTAGAGGCCGTCTGGGCCGTTGTGTTGGACAGTGTTGAGAA CCCGCAGAGGTATATGTCAGATGTGGAAGCGGTCAGGGTATTGGAACGGCTTCAAGGTGGAATTACCAAGGAACTCACGA TACGTGGCATGGAGTACGCGCCCGGGTGCTTTGATTTTTTCGTGTTCGAAAGGGGAACGCTAAAGAAGATCAAAAGCACG GAAAATGACAACGTGTGCGCCTCTGGAGTGTTCGACTCCTTTGTGTTTGAAAGCTCGATTATCCGGGAGGTCACGGTGCG GGGCGTGCCTTACCGGGAAAGGATTCGGATAAGCAACAAGGAGAGGAAAATTCACCGCGAACTGATCGACCATCCCGCCT GTTCCGGAAAGATAATCGTAAAAGCGGTTCCCTGCTCCGTGCAGAACCCCATGGCTCCTGTTGATCTGCAATTCTTTCTG GAGCTGAAATCCATGAAAGGGGCGAAAGAGGAAACAGAAGAGATGACCGGAGAAATCAAGAAAGAGCAACAGCGGCTTAA GGAGAAGGCCGAGGAACTGGAAGCAAGTGCTTTACGAGTACTTTAA
Upstream 100 bases:
>100_bases CAAGACGCAGGCGACACGCTGTCCTTCTCGTTTCACCGTCCGTGCCGGCCAGCATACGCATTTCTCCACTACCCGATAAT CCTTCTCCGGAGGTCAGACA
Downstream 100 bases:
>100_bases GGAGAGAAGGCCGATCAGGCCCTAAGCCGGATGAGGAGGAAACCGACATGCAGTTTGCCGCGAAACTCGCCGAAGTCCCC CTCTGGGGGAAAAAACTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MMAITFRTWVRAELEAVWAVVLDSVENPQRYMSDVEAVRVLERLQGGITKELTIRGMEYAPGCFDFFVFERGTLKKIKST ENDNVCASGVFDSFVFESSIIREVTVRGVPYRERIRISNKERKIHRELIDHPACSGKIIVKAVPCSVQNPMAPVDLQFFL ELKSMKGAKEETEEMTGEIKKEQQRLKEKAEELEASALRVL
Sequences:
>Translated_201_residues MMAITFRTWVRAELEAVWAVVLDSVENPQRYMSDVEAVRVLERLQGGITKELTIRGMEYAPGCFDFFVFERGTLKKIKST ENDNVCASGVFDSFVFESSIIREVTVRGVPYRERIRISNKERKIHRELIDHPACSGKIIVKAVPCSVQNPMAPVDLQFFL ELKSMKGAKEETEEMTGEIKKEQQRLKEKAEELEASALRVL >Mature_201_residues MMAITFRTWVRAELEAVWAVVLDSVENPQRYMSDVEAVRVLERLQGGITKELTIRGMEYAPGCFDFFVFERGTLKKIKST ENDNVCASGVFDSFVFESSIIREVTVRGVPYRERIRISNKERKIHRELIDHPACSGKIIVKAVPCSVQNPMAPVDLQFFL ELKSMKGAKEETEEMTGEIKKEQQRLKEKAEELEASALRVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22990; Mature: 22990
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAITFRTWVRAELEAVWAVVLDSVENPQRYMSDVEAVRVLERLQGGITKELTIRGMEYA CEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEHEECCCCCC PGCFDFFVFERGTLKKIKSTENDNVCASGVFDSFVFESSIIREVTVRGVPYRERIRISNK CCHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCH ERKIHRELIDHPACSGKIIVKAVPCSVQNPMAPVDLQFFLELKSMKGAKEETEEMTGEIK HHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH KEQQRLKEKAEELEASALRVL HHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MMAITFRTWVRAELEAVWAVVLDSVENPQRYMSDVEAVRVLERLQGGITKELTIRGMEYA CEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEHEECCCCCC PGCFDFFVFERGTLKKIKSTENDNVCASGVFDSFVFESSIIREVTVRGVPYRERIRISNK CCHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCH ERKIHRELIDHPACSGKIIVKAVPCSVQNPMAPVDLQFFLELKSMKGAKEETEEMTGEIK HHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH KEQQRLKEKAEELEASALRVL HHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA