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The map label for this gene is 78222232

Identifier: 78222232

GI number: 78222232

Start: 1125667

End: 1126209

Strand: Direct

Name: 78222232

Synonym: Gmet_1012

Alternate gene names: NA

Gene position: 1125667-1126209 (Clockwise)

Preceding gene: 78222231

Following gene: 78222233

Centisome position: 28.16

GC content: 57.09

Gene sequence:

>543_bases
ATGGAAAAGAGAGCGACACAGATACTCGAAGAAGAGCACCACCTGATCCAGCAGGTGGTCGGCGCCATGGCCGCGCTGGC
TGACCGGGTGTTCGAGGGGCAGGTGGCGGAAAAAGAGACACTCGTCAATCTCGTGGACTTCATGCGGGTATTCGTGGAGA
AGTGCCATCACGAAAAGGAAGAAAATCACCTCTTCCCACTTCTGGTAAAGAAAGGAGTGCCGGTAGCGGGGTGCCCGATC
GGTATGCTGACTCGCGAACACCAGGCTGCCGGCAAACTGACGACCGACTTGGGGGCGGCGGTCGAGGCGTATCTCAAGGA
ACCCTCGGGAATGGGGCACTTTCTGGTAACGACCCTGCGTGGCGTCGTAGCGCTCTATCCGGGGCATATCTGGAGGGAAA
ACTACCTCCTGTTTCCCATGACCGACAAGATCCTGGACGATCGGGAACAGGAGGGACTGGTGGAACAGTTCGAGACAGTG
GAACGAAAGATAGGCCTTGATGTCCATCAGCGCTTCGAACATCTGGCTGAGAAAGCTGGGTAG

Upstream 100 bases:

>100_bases
CCTTCTACGAGGTGATCGCCGGATAGCCATAACGAAGCAGCAGAGAAGTTGGAAAGATCGGCTTGATTGAGACAGTCATG
CCCGAATGCGGAGGCAGGCA

Downstream 100 bases:

>100_bases
GCAGGGCTTCGGATTCTTAAGGTGAAAGGGGAAAAGACCATGACTGAAAAAACCTGGGAATGGTTTGGAACAACAGCGGC
CTTGATTTACATACTGATCA

Product: hemerythrin HHE cation binding region

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MEKRATQILEEEHHLIQQVVGAMAALADRVFEGQVAEKETLVNLVDFMRVFVEKCHHEKEENHLFPLLVKKGVPVAGCPI
GMLTREHQAAGKLTTDLGAAVEAYLKEPSGMGHFLVTTLRGVVALYPGHIWRENYLLFPMTDKILDDREQEGLVEQFETV
ERKIGLDVHQRFEHLAEKAG

Sequences:

>Translated_180_residues
MEKRATQILEEEHHLIQQVVGAMAALADRVFEGQVAEKETLVNLVDFMRVFVEKCHHEKEENHLFPLLVKKGVPVAGCPI
GMLTREHQAAGKLTTDLGAAVEAYLKEPSGMGHFLVTTLRGVVALYPGHIWRENYLLFPMTDKILDDREQEGLVEQFETV
ERKIGLDVHQRFEHLAEKAG
>Mature_180_residues
MEKRATQILEEEHHLIQQVVGAMAALADRVFEGQVAEKETLVNLVDFMRVFVEKCHHEKEENHLFPLLVKKGVPVAGCPI
GMLTREHQAAGKLTTDLGAAVEAYLKEPSGMGHFLVTTLRGVVALYPGHIWRENYLLFPMTDKILDDREQEGLVEQFETV
ERKIGLDVHQRFEHLAEKAG

Specific function: Unknown

COG id: COG3945

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20350; Mature: 20350

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: PS00053 RIBOSOMAL_S8

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKRATQILEEEHHLIQQVVGAMAALADRVFEGQVAEKETLVNLVDFMRVFVEKCHHEKE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHH
ENHLFPLLVKKGVPVAGCPIGMLTREHQAAGKLTTDLGAAVEAYLKEPSGMGHFLVTTLR
CCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
GVVALYPGHIWRENYLLFPMTDKILDDREQEGLVEQFETVERKIGLDVHQRFEHLAEKAG
HHHHHHCCCHHHCCEEEEECCHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MEKRATQILEEEHHLIQQVVGAMAALADRVFEGQVAEKETLVNLVDFMRVFVEKCHHEKE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHH
ENHLFPLLVKKGVPVAGCPIGMLTREHQAAGKLTTDLGAAVEAYLKEPSGMGHFLVTTLR
CCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
GVVALYPGHIWRENYLLFPMTDKILDDREQEGLVEQFETVERKIGLDVHQRFEHLAEKAG
HHHHHHCCCHHHCCEEEEECCHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA