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The map label for this gene is ydfG [H]

Identifier: 78222230

GI number: 78222230

Start: 1124642

End: 1125103

Strand: Direct

Name: ydfG [H]

Synonym: Gmet_1010

Alternate gene names: 78222230

Gene position: 1124642-1125103 (Clockwise)

Preceding gene: 78222228

Following gene: 78222231

Centisome position: 28.13

GC content: 53.9

Gene sequence:

>462_bases
ATGCGAATCGAATATGTCAAAGTGGTGCCTGACGTATACAGAGCGATGATGTGTCTAGAACATCAGGTCGAAAAGAGCGG
TCTGGAAAGCCCACTGCTCGACCTGATAAAGATGCGGGCATCGCAGATCAATGGTTGTGCCTATTGCATCGACATGCATT
CGAAGGATGCCCGGGCGCGAGGTGAAACCGAGCAGCGGCTTTACGAACTGGATGCCTGGCGGGAATCACCGTTTTACACT
GAGCGGGAACAGGCTGCATTGGCCTGGACCGAAGCTCTGACGTTAGTCACCAATGGTCATGTACCTAATGGGGTTTATGA
GGAAGCCCGGAAACAGTTCACCGATGTTGAGCTTGTTAACCTCACGCTTGCCGTCGTCGCAATAAATGGTTGGAACCGCT
TGGGGATCGCCTTTCGTTCTGTCCCTGGCGGGTACCATCCTGCCAGCGGCCTCTCACGGTGA

Upstream 100 bases:

>100_bases
GGGGCGCCGAACGTGTTCGGCGCCTAAACTTTTACCTGGAGGAGGTAAGTATAAAAGCCCCACGGGTTGACAAGGGAGAC
TTCATGCAAGGAGGCAGCGG

Downstream 100 bases:

>100_bases
AGTTGTGAGTTTTCATGTTGCGGATGTTCGACCTGCCTTGGCGCTACGGCAATAGTTGCGGTTGCCGGTTTCAGTGATAA
TGTTCAAAAATAACAATGCA

Product: alkylhydroperoxidase AhpD core

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MRIEYVKVVPDVYRAMMCLEHQVEKSGLESPLLDLIKMRASQINGCAYCIDMHSKDARARGETEQRLYELDAWRESPFYT
EREQAALAWTEALTLVTNGHVPNGVYEEARKQFTDVELVNLTLAVVAINGWNRLGIAFRSVPGGYHPASGLSR

Sequences:

>Translated_153_residues
MRIEYVKVVPDVYRAMMCLEHQVEKSGLESPLLDLIKMRASQINGCAYCIDMHSKDARARGETEQRLYELDAWRESPFYT
EREQAALAWTEALTLVTNGHVPNGVYEEARKQFTDVELVNLTLAVVAINGWNRLGIAFRSVPGGYHPASGLSR
>Mature_153_residues
MRIEYVKVVPDVYRAMMCLEHQVEKSGLESPLLDLIKMRASQINGCAYCIDMHSKDARARGETEQRLYELDAWRESPFYT
EREQAALAWTEALTLVTNGHVPNGVYEEARKQFTDVELVNLTLAVVAINGWNRLGIAFRSVPGGYHPASGLSR

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004675
- InterPro:   IPR003779 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: NA

Molecular weight: Translated: 17302; Mature: 17302

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIEYVKVVPDVYRAMMCLEHQVEKSGLESPLLDLIKMRASQINGCAYCIDMHSKDARAR
CCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCC
GETEQRLYELDAWRESPFYTEREQAALAWTEALTLVTNGHVPNGVYEEARKQFTDVELVN
CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCHHHHH
LTLAVVAINGWNRLGIAFRSVPGGYHPASGLSR
EEEEEEEECCCCEECEEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MRIEYVKVVPDVYRAMMCLEHQVEKSGLESPLLDLIKMRASQINGCAYCIDMHSKDARAR
CCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCC
GETEQRLYELDAWRESPFYTEREQAALAWTEALTLVTNGHVPNGVYEEARKQFTDVELVN
CHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCHHHHH
LTLAVVAINGWNRLGIAFRSVPGGYHPASGLSR
EEEEEEEECCCCEECEEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]