| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is dksA [C]
Identifier: 78222227
GI number: 78222227
Start: 1122508
End: 1122900
Strand: Reverse
Name: dksA [C]
Synonym: Gmet_1007
Alternate gene names: 78222227
Gene position: 1122900-1122508 (Counterclockwise)
Preceding gene: 78222229
Following gene: 78222226
Centisome position: 28.09
GC content: 64.89
Gene sequence:
>393_bases ATGACACGGATGTCCAGAGAGCGTCAGGAACGGCTTATGGAACTGCTGCTGGCCGAGAAGAGGCGGCTGTGGGGCGAGGT GCGGCGGGAGTTGTTCGGCCAGGTGGGAGGAGAGCTGCAGAGCCAGAACGACCTTCCCCAGGATGTGGGTGATCGGGGGC TCATCGATACGCTTGAGGACACCGGTATGGCCGTGGCTGATATTCGCCGGCAGGAACTGACCCGGATGGACGAGGCCCTG GGCCGGCTGAAGGAGGGACGTTACGGCTTCTGCGATGAGTGCGGTGCAGAAATCGACGAAGGCCGGCTCCGGGTGGCCCC CTACGCCCCCTGTTGCATCAGTTGCCAGACTCGCCGGGAAGGCCCCTCGTACGGGCCGGGCGTAACGCTCTGA
Upstream 100 bases:
>100_bases AAGCGCGATGCCGGATACGTGGTATACTCTCTTTTGATAATTCATCCTCATCTTTAAGTATACCCGAACGGGCTCCATCA CGGGAGATTCGGAGGAGAAC
Downstream 100 bases:
>100_bases GAGTCGGAGGGTATGCCATGAAAGAAGCCATGTTCTACAAGCGGGAGAGCGGCAACAGGGCCCACTGTGGCCTCTGCCGC CACCGGTGCATGATCGCCGA
Product: TraR/DksA family transcriptional regulator
Products: NA
Alternate protein names: DNAK Suppressor Protein; Transcriptional Regulator TraR/DksA Family; DNAK Suppressor
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MTRMSRERQERLMELLLAEKRRLWGEVRRELFGQVGGELQSQNDLPQDVGDRGLIDTLEDTGMAVADIRRQELTRMDEAL GRLKEGRYGFCDECGAEIDEGRLRVAPYAPCCISCQTRREGPSYGPGVTL
Sequences:
>Translated_130_residues MTRMSRERQERLMELLLAEKRRLWGEVRRELFGQVGGELQSQNDLPQDVGDRGLIDTLEDTGMAVADIRRQELTRMDEAL GRLKEGRYGFCDECGAEIDEGRLRVAPYAPCCISCQTRREGPSYGPGVTL >Mature_129_residues TRMSRERQERLMELLLAEKRRLWGEVRRELFGQVGGELQSQNDLPQDVGDRGLIDTLEDTGMAVADIRRQELTRMDEALG RLKEGRYGFCDECGAEIDEGRLRVAPYAPCCISCQTRREGPSYGPGVTL
Specific function: Dosage-Dependent Suppressor Of A Dnak Deletion Mutation. It Suppressed Not Only The Temperature-Sensitive Growth But Also The Filamentous Phenotype Of The Dnak Deletion Strain, While The Defect Of Lambda Growth Is Not Suppressed. [C]
COG id: COG1734
COG function: function code T; DnaK suppressor protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14750; Mature: 14619
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS01102 ZF_DKSA_1 ; PS51128 ZF_DKSA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRMSRERQERLMELLLAEKRRLWGEVRRELFGQVGGELQSQNDLPQDVGDRGLIDTLED CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCHHHHHH TGMAVADIRRQELTRMDEALGRLKEGRYGFCDECGAEIDEGRLRVAPYAPCCISCQTRRE CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCEEECCCCCCCCCCCCCCC GPSYGPGVTL CCCCCCCCCC >Mature Secondary Structure TRMSRERQERLMELLLAEKRRLWGEVRRELFGQVGGELQSQNDLPQDVGDRGLIDTLED CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCHHHHHH TGMAVADIRRQELTRMDEALGRLKEGRYGFCDECGAEIDEGRLRVAPYAPCCISCQTRRE CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCEEECCCCCCCCCCCCCCC GPSYGPGVTL CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA