| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is ssuA [C]
Identifier: 78222216
GI number: 78222216
Start: 1109967
End: 1111022
Strand: Direct
Name: ssuA [C]
Synonym: Gmet_0996
Alternate gene names: 78222216
Gene position: 1109967-1111022 (Clockwise)
Preceding gene: 78222214
Following gene: 78222217
Centisome position: 27.77
GC content: 58.62
Gene sequence:
>1056_bases GTGGCCGGAGCTATTGGATGGGAAAAAGCGATAAAATCGGGCCGGGTGTGGGGAGCTTTCCTTCTCTGCCTGCTCCTTGT GCCCTGGTCCCAGTCCCACGCAGGGGCCAAGCGGCTCCGGTTGGGGTATTTTCCGAACATTACCCATGGGCAGGCCCTCT ACGCGCGGGCAACCGGCGAACTGGAGAAAATGATGGGCGTCCCCATCGAGTGGATCCCCTTCAATGCCGGGCCGTCGGTC ATCGAAGCCCTGTTCGTCGATGCGCTTGATGCCGCGTTCATCGGCCCCAGTCCGACGATCAACGGGTACATAAAGTCCAA GGGGGAGAAATTCGTCATTGTGGCGGGCGCTTCCAGTGGCGGAGCAGGGCTGGTGGTGCGAAAGGATTCGGGAATCGGGG GGGAAAAGGATTTTCACGGCAAGGTCATCGCCACGCCGCAACTGGGCAACACGCAGGACCTCGCCGCCCGTGCCTGGTTC GCAGCCAAGGGGTACAGGCTCAAGGAAACGGGAGGGACGGTTTCATTGGTTCCCCTTTCCAACCCTGATCAACTGACCAT GTTCAAGAAAAAGCAGATTGACGGGGCCTGGACCATCGAGCCGTGGCTCTCCCGTCTGGAACTGGAGGGTGGGGGCCGTC TCTTTCTCGATGAGAAAAGCCTCTGGCCCGAGGGACGCTACGTGACCACCCATCTGGTCGTGCATAGAAAATTTCTGGCC GAGAACGAGGAGCTGGTGAAAAAGCTGCTGACGGCCCATGTGGAACTCACCCAACGGATGAATGCCGACAAGGTGGCAAC CGCCAGGCTCCTCAACGGGCAACTGAAGAAAGACACAGGCAAGGAGTTGGAAGGCGAGGTCATCAGCCGGGCCCTCAGTC GTGTGGAATTTACCTGGGATCCCATCGCCCCGTCCATGGCGAAATTGGCTGAAATCGCCCATAGGATAAAATTTCTCAGG ACAAGTCCCCGACTTGACGGAATCTACGAGCTCAACCCCTTGAATGCGGTGTTACGGCAGAAGAACCTGCCCGAGGTGAG TGATGGAGTTCGGTAA
Upstream 100 bases:
>100_bases GGACGGTATGAGGTAATCGCCCGAAATTACTTTATACTGTCTCTGACGTCGGTACCTTTCCGCGGCAATGTCGCCGCAAT ACGATTCACGGGAGCGCCAG
Downstream 100 bases:
>100_bases CCGAACGAAAACGCAAGCGCCACCGCCGCAAAATGTTTCGGCAAAACCATTGCGGGCGAAGCTGCTGCAGCTTACGAATG TTTCGAAGACCTTCCAGAGT
Product: ABC transporter substrate-binding protein, aliphatic sulphonates
Products: NA
Alternate protein names: NLPA Lipoprotein; ABC Transporter
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MAGAIGWEKAIKSGRVWGAFLLCLLLVPWSQSHAGAKRLRLGYFPNITHGQALYARATGELEKMMGVPIEWIPFNAGPSV IEALFVDALDAAFIGPSPTINGYIKSKGEKFVIVAGASSGGAGLVVRKDSGIGGEKDFHGKVIATPQLGNTQDLAARAWF AAKGYRLKETGGTVSLVPLSNPDQLTMFKKKQIDGAWTIEPWLSRLELEGGGRLFLDEKSLWPEGRYVTTHLVVHRKFLA ENEELVKKLLTAHVELTQRMNADKVATARLLNGQLKKDTGKELEGEVISRALSRVEFTWDPIAPSMAKLAEIAHRIKFLR TSPRLDGIYELNPLNAVLRQKNLPEVSDGVR
Sequences:
>Translated_351_residues MAGAIGWEKAIKSGRVWGAFLLCLLLVPWSQSHAGAKRLRLGYFPNITHGQALYARATGELEKMMGVPIEWIPFNAGPSV IEALFVDALDAAFIGPSPTINGYIKSKGEKFVIVAGASSGGAGLVVRKDSGIGGEKDFHGKVIATPQLGNTQDLAARAWF AAKGYRLKETGGTVSLVPLSNPDQLTMFKKKQIDGAWTIEPWLSRLELEGGGRLFLDEKSLWPEGRYVTTHLVVHRKFLA ENEELVKKLLTAHVELTQRMNADKVATARLLNGQLKKDTGKELEGEVISRALSRVEFTWDPIAPSMAKLAEIAHRIKFLR TSPRLDGIYELNPLNAVLRQKNLPEVSDGVR >Mature_350_residues AGAIGWEKAIKSGRVWGAFLLCLLLVPWSQSHAGAKRLRLGYFPNITHGQALYARATGELEKMMGVPIEWIPFNAGPSVI EALFVDALDAAFIGPSPTINGYIKSKGEKFVIVAGASSGGAGLVVRKDSGIGGEKDFHGKVIATPQLGNTQDLAARAWFA AKGYRLKETGGTVSLVPLSNPDQLTMFKKKQIDGAWTIEPWLSRLELEGGGRLFLDEKSLWPEGRYVTTHLVVHRKFLAE NEELVKKLLTAHVELTQRMNADKVATARLLNGQLKKDTGKELEGEVISRALSRVEFTWDPIAPSMAKLAEIAHRIKFLRT SPRLDGIYELNPLNAVLRQKNLPEVSDGVR
Specific function: Part Of A Binding-Protein-Dependent Transport System For Aliphatic Sulfonates. Putative Binding Protein. [C]
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38501; Mature: 38370
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: PS00144 ASN_GLN_ASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGAIGWEKAIKSGRVWGAFLLCLLLVPWSQSHAGAKRLRLGYFPNITHGQALYARATGE CCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCCCCCCEEEEHHHHH LEKMMGVPIEWIPFNAGPSVIEALFVDALDAAFIGPSPTINGYIKSKGEKFVIVAGASSG HHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCEEEEEEECCCC GAGLVVRKDSGIGGEKDFHGKVIATPQLGNTQDLAARAWFAAKGYRLKETGGTVSLVPLS CCEEEEECCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCEEEEECCCEEEEEECC NPDQLTMFKKKQIDGAWTIEPWLSRLELEGGGRLFLDEKSLWPEGRYVTTHLVVHRKFLA CCCCEEEEHHHCCCCCEEHHHHHHHEEECCCCEEEEECCCCCCCCCEEEHHHHHHHHHHC ENEELVKKLLTAHVELTQRMNADKVATARLLNGQLKKDTGKELEGEVISRALSRVEFTWD CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCEEEEC PIAPSMAKLAEIAHRIKFLRTSPRLDGIYELNPLNAVLRQKNLPEVSDGVR CCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHCCCCCHHCCCC >Mature Secondary Structure AGAIGWEKAIKSGRVWGAFLLCLLLVPWSQSHAGAKRLRLGYFPNITHGQALYARATGE CCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCCCCCCEEEEHHHHH LEKMMGVPIEWIPFNAGPSVIEALFVDALDAAFIGPSPTINGYIKSKGEKFVIVAGASSG HHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCEEEEEEECCCC GAGLVVRKDSGIGGEKDFHGKVIATPQLGNTQDLAARAWFAAKGYRLKETGGTVSLVPLS CCEEEEECCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCEEEEECCCEEEEEECC NPDQLTMFKKKQIDGAWTIEPWLSRLELEGGGRLFLDEKSLWPEGRYVTTHLVVHRKFLA CCCCEEEEHHHCCCCCEEHHHHHHHEEECCCCEEEEECCCCCCCCCEEEHHHHHHHHHHC ENEELVKKLLTAHVELTQRMNADKVATARLLNGQLKKDTGKELEGEVISRALSRVEFTWD CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCEEEEC PIAPSMAKLAEIAHRIKFLRTSPRLDGIYELNPLNAVLRQKNLPEVSDGVR CCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA