| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is 78222206
Identifier: 78222206
GI number: 78222206
Start: 1093683
End: 1094519
Strand: Direct
Name: 78222206
Synonym: Gmet_0986
Alternate gene names: NA
Gene position: 1093683-1094519 (Clockwise)
Preceding gene: 78222205
Following gene: 78222207
Centisome position: 27.36
GC content: 60.33
Gene sequence:
>837_bases ATGTCACTCACCATAGGTCACATAGAATACTCCAACTGCACCCCCATATTCACGGCGCTGCAACGCAGTATGGATTGTAG CGGCTACAGCTTTGTCCGGGGGGTGCCGGCACACCTGAACCGGTTGCTTGCCATGGGGGAAATCGATGTCTGCCCGTCAT CGTCCATCGAGTACGGGAAATATCCCGACCGCTATCTTGTTCTCCCCGATCTTTCCATCAGCGCGGTGGGGCCGGTGAAA AGCGTCCTCCTCTTTTCCCGCGTGCCACTGGAGCGCCTTGATGGTGCCGTTATCGGCATGACGACGGAGTCCGACACGTC GGTAAATCTCCTCAGGATAATTCTCACCACATTCCAGGGTTTCACGAACAGTTTCGAGCGGACCCCGCTTCCCCTGGCTG AGGCCCTCGACTCCTATCCGGCCCTTCTCCTCATCGGTGACAGAGCCCTCAAGGGGGCGCTGACAGGGGGGGGGTACCAC ATTTACGACCTCGGCGATCTGTGGTACCGGGCAACGGGGCTCCCCTTCGTCTTTGCCCTCTGGTTGCTGCGGAGAGAGGC TGCGGAGAACAAGCCCCACGAGGTTGCACGGCTCGCCGTCGATGTTGCCCGGGCGAAGCGGATCGCCTACGACTCCTATC CAGAGATAGCCGCCCAAGCGCCGGAGCGGGAGTGGATCGACAGTGCGGTGCTGGTCGACTATTGGCGGACCATTTCCTAC GATCTTACTCCTGCACATCTCAAGGGGGTGCGGCTCTTCTACAATTATGCCGCCAGCCTCGGGGTGCTCCCTGCTGCTCC GGACGTGCGGCTCTATGGAGAGAGTGGTGGCGTGTGA
Upstream 100 bases:
>100_bases CGAATAGCCACAATCAGGTTCAGATGCAGGCGAAGGCGAGATTACCTATCTCGCCTTTGTTTTTGAGCAATTCATTTCAT GATGCAGGAGCGGTGTCACC
Downstream 100 bases:
>100_bases TTTGCATGCAAGCACCCCATGGGCCTCGATACTTCATGGAAATCAGATTGGTTTGACGTCGCAGTACGCCGCCTGAGAGG GGCTTCGGATAAACTGGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MSLTIGHIEYSNCTPIFTALQRSMDCSGYSFVRGVPAHLNRLLAMGEIDVCPSSSIEYGKYPDRYLVLPDLSISAVGPVK SVLLFSRVPLERLDGAVIGMTTESDTSVNLLRIILTTFQGFTNSFERTPLPLAEALDSYPALLLIGDRALKGALTGGGYH IYDLGDLWYRATGLPFVFALWLLRREAAENKPHEVARLAVDVARAKRIAYDSYPEIAAQAPEREWIDSAVLVDYWRTISY DLTPAHLKGVRLFYNYAASLGVLPAAPDVRLYGESGGV
Sequences:
>Translated_278_residues MSLTIGHIEYSNCTPIFTALQRSMDCSGYSFVRGVPAHLNRLLAMGEIDVCPSSSIEYGKYPDRYLVLPDLSISAVGPVK SVLLFSRVPLERLDGAVIGMTTESDTSVNLLRIILTTFQGFTNSFERTPLPLAEALDSYPALLLIGDRALKGALTGGGYH IYDLGDLWYRATGLPFVFALWLLRREAAENKPHEVARLAVDVARAKRIAYDSYPEIAAQAPEREWIDSAVLVDYWRTISY DLTPAHLKGVRLFYNYAASLGVLPAAPDVRLYGESGGV >Mature_277_residues SLTIGHIEYSNCTPIFTALQRSMDCSGYSFVRGVPAHLNRLLAMGEIDVCPSSSIEYGKYPDRYLVLPDLSISAVGPVKS VLLFSRVPLERLDGAVIGMTTESDTSVNLLRIILTTFQGFTNSFERTPLPLAEALDSYPALLLIGDRALKGALTGGGYHI YDLGDLWYRATGLPFVFALWLLRREAAENKPHEVARLAVDVARAKRIAYDSYPEIAAQAPEREWIDSAVLVDYWRTISYD LTPAHLKGVRLFYNYAASLGVLPAAPDVRLYGESGGV
Specific function: Unknown
COG id: COG1427
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30623; Mature: 30492
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTIGHIEYSNCTPIFTALQRSMDCSGYSFVRGVPAHLNRLLAMGEIDVCPSSSIEYGK CCEEEEEEECCCCCHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCC YPDRYLVLPDLSISAVGPVKSVLLFSRVPLERLDGAVIGMTTESDTSVNLLRIILTTFQG CCCCEEEECCCCCCCCCHHHHHHHHHCCCHHHHCCEEEEEECCCCCHHHHHHHHHHHHHH FTNSFERTPLPLAEALDSYPALLLIGDRALKGALTGGGYHIYDLGDLWYRATGLPFVFAL HHCCCCCCCCCHHHHHCCCCEEEEECCHHHHCEECCCCEEEEECHHHHHHHCCCHHHHHH WLLRREAAENKPHEVARLAVDVARAKRIAYDSYPEIAAQAPEREWIDSAVLVDYWRTISY HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCC DLTPAHLKGVRLFYNYAASLGVLPAAPDVRLYGESGGV CCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCC >Mature Secondary Structure SLTIGHIEYSNCTPIFTALQRSMDCSGYSFVRGVPAHLNRLLAMGEIDVCPSSSIEYGK CEEEEEEECCCCCHHHHHHHHHCCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCC YPDRYLVLPDLSISAVGPVKSVLLFSRVPLERLDGAVIGMTTESDTSVNLLRIILTTFQG CCCCEEEECCCCCCCCCHHHHHHHHHCCCHHHHCCEEEEEECCCCCHHHHHHHHHHHHHH FTNSFERTPLPLAEALDSYPALLLIGDRALKGALTGGGYHIYDLGDLWYRATGLPFVFAL HHCCCCCCCCCHHHHHCCCCEEEEECCHHHHCEECCCCEEEEECHHHHHHHCCCHHHHHH WLLRREAAENKPHEVARLAVDVARAKRIAYDSYPEIAAQAPEREWIDSAVLVDYWRTISY HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHHHCC DLTPAHLKGVRLFYNYAASLGVLPAAPDVRLYGESGGV CCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA