| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222190
Identifier: 78222190
GI number: 78222190
Start: 1079806
End: 1080006
Strand: Direct
Name: 78222190
Synonym: Gmet_0970
Alternate gene names: NA
Gene position: 1079806-1080006 (Clockwise)
Preceding gene: 78222189
Following gene: 78222191
Centisome position: 27.01
GC content: 51.74
Gene sequence:
>201_bases ATGAAATTCAAGAACAACGTCAGAAAGATCAGAGAAGAACGGCTCATGAGCAAGGCTGAGCTTGCGCGCCTTGCGGGGGT CTCGCCGGCCACCATCGACAGGATCGAGCACGGTGAGGAGTGCCGGATGGAGACAAAGAGAAAGATCATTCTTGCCTTTG GTTTTTCATTGTCCGAGAAGGAAGCGGTCTTTCTCGACTAA
Upstream 100 bases:
>100_bases TAATTCGTTTCAACTTCATTTAATATTAACTAATTCCTTGACATTGATTTCAATTTCAGTACATTTCGCCGTAAACTACC TGGCTTTGCGGGATTGGGCG
Downstream 100 bases:
>100_bases CCTTGTGAACGGGAATCACCTATGTTTTTCTCCAAGAAAAAGGATCTCGTCGGCATCGACATAGGCTCCAGCTCCGTGAA GCTCGTGCAGCTCCGGGAGC
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator XRE Family; Transcriptional Regulator
Number of amino acids: Translated: 66; Mature: 66
Protein sequence:
>66_residues MKFKNNVRKIREERLMSKAELARLAGVSPATIDRIEHGEECRMETKRKIILAFGFSLSEKEAVFLD
Sequences:
>Translated_66_residues MKFKNNVRKIREERLMSKAELARLAGVSPATIDRIEHGEECRMETKRKIILAFGFSLSEKEAVFLD >Mature_66_residues MKFKNNVRKIREERLMSKAELARLAGVSPATIDRIEHGEECRMETKRKIILAFGFSLSEKEAVFLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7639; Mature: 7639
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFKNNVRKIREERLMSKAELARLAGVSPATIDRIEHGEECRMETKRKIILAFGFSLSEK CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHEEEEEECCCCCCC EAVFLD CEEECC >Mature Secondary Structure MKFKNNVRKIREERLMSKAELARLAGVSPATIDRIEHGEECRMETKRKIILAFGFSLSEK CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHEEEEEECCCCCCC EAVFLD CEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA