| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is 78222188
Identifier: 78222188
GI number: 78222188
Start: 1078449
End: 1078790
Strand: Direct
Name: 78222188
Synonym: Gmet_0968
Alternate gene names: NA
Gene position: 1078449-1078790 (Clockwise)
Preceding gene: 78222187
Following gene: 78222189
Centisome position: 26.98
GC content: 53.22
Gene sequence:
>342_bases ATGCGTTACCTGATGGTCGTTGCGGCAAGTCTTGTGTTCTGTGTCAATCTCGCCGTGGCTGGACAGGACGTTCACCGGGG GCTCCCCACACTTTCCTCTCTAGGAGTGAATTTCACCGATCTCATGACTCCGGAGGCTCACGAAGGGGTGGTCATGGAGG TGCGGGGCGCGGGAAGCTTTATTCTTCGGGAAAAGCTCTATATTATCTGCCAGGAGAGTGATGTCGACGGCACCCCGGCA AATCAGGCGAAATTTTCCCTGAAGAAGGGGGACACGGTCAAAGCTACCGTCTACAGGCTTCCGAACAAGACTTATTTCGT CTCAGAGCTGGAAATAAAGTAA
Upstream 100 bases:
>100_bases GAGGTGGCGGGGGAGATGGGAGTGCCAACCAGAAGCCAATACAAGAGATTTTCAATTTCGTGACCGGTATCATACCCATT TCATGGCGAGAGGTGTTCTG
Downstream 100 bases:
>100_bases GGGAAGATTCACTGTATTGAATATGGGCAAACCTGTAAGAAAAACTGGGCGGACGATTGCCGTACTGGTTGTCATAATAC TAGGGGCCGCGTCGATTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MRYLMVVAASLVFCVNLAVAGQDVHRGLPTLSSLGVNFTDLMTPEAHEGVVMEVRGAGSFILREKLYIICQESDVDGTPA NQAKFSLKKGDTVKATVYRLPNKTYFVSELEIK
Sequences:
>Translated_113_residues MRYLMVVAASLVFCVNLAVAGQDVHRGLPTLSSLGVNFTDLMTPEAHEGVVMEVRGAGSFILREKLYIICQESDVDGTPA NQAKFSLKKGDTVKATVYRLPNKTYFVSELEIK >Mature_113_residues MRYLMVVAASLVFCVNLAVAGQDVHRGLPTLSSLGVNFTDLMTPEAHEGVVMEVRGAGSFILREKLYIICQESDVDGTPA NQAKFSLKKGDTVKATVYRLPNKTYFVSELEIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12411; Mature: 12411
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYLMVVAASLVFCVNLAVAGQDVHRGLPTLSSLGVNFTDLMTPEAHEGVVMEVRGAGSF CHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHCCCCHHHCCCCCCCCCEEEEEECCCCE ILREKLYIICQESDVDGTPANQAKFSLKKGDTVKATVYRLPNKTYFVSELEIK EEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEEEEECCCCEEEEEEEEEC >Mature Secondary Structure MRYLMVVAASLVFCVNLAVAGQDVHRGLPTLSSLGVNFTDLMTPEAHEGVVMEVRGAGSF CHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHCCCCHHHCCCCCCCCCEEEEEECCCCE ILREKLYIICQESDVDGTPANQAKFSLKKGDTVKATVYRLPNKTYFVSELEIK EEEEEEEEEEECCCCCCCCCCCEEEEECCCCEEEEEEEECCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA