| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222186
Identifier: 78222186
GI number: 78222186
Start: 1074786
End: 1075307
Strand: Direct
Name: 78222186
Synonym: Gmet_0966
Alternate gene names: NA
Gene position: 1074786-1075307 (Clockwise)
Preceding gene: 78222185
Following gene: 78222187
Centisome position: 26.89
GC content: 59.39
Gene sequence:
>522_bases GTGGTCATCCGCGGAACTCGAAAAAAGTGGTTCTTGATGCGCATGGGAGATCAGACCGGCATGGCACTGGTGACGGTCAT TACCTTTGCTGCGGTTCTCATGGCCATGATGACCATGATGCTCAATACTACCATGGTCGAAACGGTGCTAGCGGGGGCCA GCACCGTCAGCAAGCGTACTCTCGTGGCTGCCGATGCGGGGCTCCAGTTTGTTCGGGGGACATTCGTCTACATGGGGAGC AACGGTTTTCCCGCGTCGTCCTCCACAGGCAACCTCACGGCGCAGGGGCAGGCCCAACTGCCGGCACCCCTGAACCAGAA GGTGACCTTCCTGAACCTGACGGGGATGGGGGTCGACTCAAATCTTCTGGTCGGCAGCGGTTTCAGCAGCAGGTATGTGG CGCCCACAGCCGGTGGAGGAGCATTGGTGCTGAAACCCTATCGCAGCCGGACCGTTGCCCGTGCCGAGAACGGGACTTCA CGAAAGATCGTCGAGTTTGAGGGATTCAGTCTCGCACCCTAA
Upstream 100 bases:
>100_bases GTAACGGTATAGCGCGGGCGGCCGACGGATACCGTAGGCGTACGTACTCGGTAACCGTCAGCCCCCGAAACTTCGGGCTC TAAGAACGGGAGGTAGTTCA
Downstream 100 bases:
>100_bases ACGGGTCGGAACTTTGTATTTCCGCACGAAACGCAGGGAGGTAGCAGCCATGTTGACGAGCAGGCTCTTTAAAAAGATCA TGCGGATGCTTTCCGTTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MVIRGTRKKWFLMRMGDQTGMALVTVITFAAVLMAMMTMMLNTTMVETVLAGASTVSKRTLVAADAGLQFVRGTFVYMGS NGFPASSSTGNLTAQGQAQLPAPLNQKVTFLNLTGMGVDSNLLVGSGFSSRYVAPTAGGGALVLKPYRSRTVARAENGTS RKIVEFEGFSLAP
Sequences:
>Translated_173_residues MVIRGTRKKWFLMRMGDQTGMALVTVITFAAVLMAMMTMMLNTTMVETVLAGASTVSKRTLVAADAGLQFVRGTFVYMGS NGFPASSSTGNLTAQGQAQLPAPLNQKVTFLNLTGMGVDSNLLVGSGFSSRYVAPTAGGGALVLKPYRSRTVARAENGTS RKIVEFEGFSLAP >Mature_173_residues MVIRGTRKKWFLMRMGDQTGMALVTVITFAAVLMAMMTMMLNTTMVETVLAGASTVSKRTLVAADAGLQFVRGTFVYMGS NGFPASSSTGNLTAQGQAQLPAPLNQKVTFLNLTGMGVDSNLLVGSGFSSRYVAPTAGGGALVLKPYRSRTVARAENGTS RKIVEFEGFSLAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18271; Mature: 18271
Theoretical pI: Translated: 11.31; Mature: 11.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.9 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.9 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIRGTRKKWFLMRMGDQTGMALVTVITFAAVLMAMMTMMLNTTMVETVLAGASTVSKRT CEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE LVAADAGLQFVRGTFVYMGSNGFPASSSTGNLTAQGQAQLPAPLNQKVTFLNLTGMGVDS EEEECCCCEEEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCC NLLVGSGFSSRYVAPTAGGGALVLKPYRSRTVARAENGTSRKIVEFEGFSLAP CEEEECCCCCCEECCCCCCCEEEECCCCCCEEEECCCCCCCEEEEECCCCCCC >Mature Secondary Structure MVIRGTRKKWFLMRMGDQTGMALVTVITFAAVLMAMMTMMLNTTMVETVLAGASTVSKRT CEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE LVAADAGLQFVRGTFVYMGSNGFPASSSTGNLTAQGQAQLPAPLNQKVTFLNLTGMGVDS EEEECCCCEEEEEEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCC NLLVGSGFSSRYVAPTAGGGALVLKPYRSRTVARAENGTSRKIVEFEGFSLAP CEEEECCCCCCEECCCCCCCEEEECCCCCCEEEECCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA