Definition Geobacter metallireducens GS-15 chromosome, complete genome.
Accession NC_007517
Length 3,997,420

Click here to switch to the map view.

The map label for this gene is 78222185

Identifier: 78222185

GI number: 78222185

Start: 1074085

End: 1074768

Strand: Direct

Name: 78222185

Synonym: Gmet_0965

Alternate gene names: NA

Gene position: 1074085-1074768 (Clockwise)

Preceding gene: 78222184

Following gene: 78222186

Centisome position: 26.87

GC content: 57.31

Gene sequence:

>684_bases
ATGAGCCAATCATCCCTCAACGGTCGCCGTGGATTTACCCTTGTCGAACTCCTTGTCACCATGTTTGTTGCCGCTTTGGT
GATCATGGCGGCCACGACGACTTTCATCGTACAGAACAAGATGGCGAGTGTCCAGTCCGCCACAAGTGATGTGCAGATAA
GCGGTCAGATGGTGATGGATCTGCTCGAGCGCGACATCCGCATGGCCGGGTTTGGGGTGAGCAAGGCAACGGGACTGGCT
GCCTCGGACAACGCCCTTGCCAACGATGCAACGTGTAGTGTCGGTACCGATGCTGTCCAGATCCGTTATTCGACGGCAAT
TTCATCCGGGTCGACCAGAGGTTCTCGGGCGTACAACTATTACGTCAGTAAGGACCCTGCCAACCCGGGGTTGATGCGGC
AGGATCTCCTGCCGGGCGGGACAACGGATCCCATCGCGTCAAACGTAGAGGACCTGCAGATATCCGGGGTCTATGACGAT
GACGGTTCAGCGGTGAATCTGGGGAATGTCGATCCGGCCCGCCCCATGAGAGTTACTCTTCAGATTCTCCTGAAATCCCA
GGCCAGGGATCCTGACTCCACGACAACTCCTCCGACAATTGGTAACGGTATAGCGCGGGCGGCCGACGGATACCGTAGGC
GTACGTACTCGGTAACCGTCAGCCCCCGAAACTTCGGGCTCTAA

Upstream 100 bases:

>100_bases
GCAATTTGGCCTTTATTAATATGTCCACTACGTGGACCGACAAAAACGGCAGGCACGGCATGAATTTTTCAGTCGTCAGG
TCCCGGTGAGGAGGGGCGTT

Downstream 100 bases:

>100_bases
GAACGGGAGGTAGTTCAGTGGTCATCCGCGGAACTCGAAAAAAGTGGTTCTTGATGCGCATGGGAGATCAGACCGGCATG
GCACTGGTGACGGTCATTAC

Product: N-terminal methylation

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MSQSSLNGRRGFTLVELLVTMFVAALVIMAATTTFIVQNKMASVQSATSDVQISGQMVMDLLERDIRMAGFGVSKATGLA
ASDNALANDATCSVGTDAVQIRYSTAISSGSTRGSRAYNYYVSKDPANPGLMRQDLLPGGTTDPIASNVEDLQISGVYDD
DGSAVNLGNVDPARPMRVTLQILLKSQARDPDSTTTPPTIGNGIARAADGYRRRTYSVTVSPRNFGL

Sequences:

>Translated_227_residues
MSQSSLNGRRGFTLVELLVTMFVAALVIMAATTTFIVQNKMASVQSATSDVQISGQMVMDLLERDIRMAGFGVSKATGLA
ASDNALANDATCSVGTDAVQIRYSTAISSGSTRGSRAYNYYVSKDPANPGLMRQDLLPGGTTDPIASNVEDLQISGVYDD
DGSAVNLGNVDPARPMRVTLQILLKSQARDPDSTTTPPTIGNGIARAADGYRRRTYSVTVSPRNFGL
>Mature_226_residues
SQSSLNGRRGFTLVELLVTMFVAALVIMAATTTFIVQNKMASVQSATSDVQISGQMVMDLLERDIRMAGFGVSKATGLAA
SDNALANDATCSVGTDAVQIRYSTAISSGSTRGSRAYNYYVSKDPANPGLMRQDLLPGGTTDPIASNVEDLQISGVYDDD
GSAVNLGNVDPARPMRVTLQILLKSQARDPDSTTTPPTIGNGIARAADGYRRRTYSVTVSPRNFGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24023; Mature: 23892

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSSLNGRRGFTLVELLVTMFVAALVIMAATTTFIVQNKMASVQSATSDVQISGQMVMD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHH
LLERDIRMAGFGVSKATGLAASDNALANDATCSVGTDAVQIRYSTAISSGSTRGSRAYNY
HHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEE
YVSKDPANPGLMRQDLLPGGTTDPIASNVEDLQISGVYDDDGSAVNLGNVDPARPMRVTL
EEECCCCCCCCHHHHCCCCCCCCHHHCCCCCEEEEEEECCCCCEEECCCCCCCCHHHHHH
QILLKSQARDPDSTTTPPTIGNGIARAADGYRRRTYSVTVSPRNFGL
HHHHHHHCCCCCCCCCCCCCCCHHHHHHCCHHEEEEEEEECCCCCCC
>Mature Secondary Structure 
SQSSLNGRRGFTLVELLVTMFVAALVIMAATTTFIVQNKMASVQSATSDVQISGQMVMD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHH
LLERDIRMAGFGVSKATGLAASDNALANDATCSVGTDAVQIRYSTAISSGSTRGSRAYNY
HHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEEEEE
YVSKDPANPGLMRQDLLPGGTTDPIASNVEDLQISGVYDDDGSAVNLGNVDPARPMRVTL
EEECCCCCCCCHHHHCCCCCCCCHHHCCCCCEEEEEEECCCCCEEECCCCCCCCHHHHHH
QILLKSQARDPDSTTTPPTIGNGIARAADGYRRRTYSVTVSPRNFGL
HHHHHHHCCCCCCCCCCCCCCCHHHHHHCCHHEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA