| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222183
Identifier: 78222183
GI number: 78222183
Start: 1073161
End: 1073673
Strand: Direct
Name: 78222183
Synonym: Gmet_0963
Alternate gene names: NA
Gene position: 1073161-1073673 (Clockwise)
Preceding gene: 78222182
Following gene: 78222184
Centisome position: 26.85
GC content: 54.97
Gene sequence:
>513_bases ATGATTTCCAAAGCACACAACAACCGAGGATTCTCACTCATCGAGTTGATTGTTACCGTTGCGATTATCGGCATCCTTGC CGGAATCGGGACGGTCATGTACCTGCGTGAGCTCCCGCTCTATCGGCTCAAGGATGCAACGCGCCTACTGTTCAGCGATA TCCAGAGTGCCCGCATCTGCGCCCTGCGCAACGGTGCTCCGTGCACCCTTGAGCAGTTCCCGACCAATGGAAACGGTTAT CGAATTGTCCAGAACGGGACGGTTCTCAAGACAATTGATTTGGGCGGTTTCACCGGCGTTTCATTCGGTAGCCTGAATGC CGACGCCCCTGCTCCCGATTCAGGGACCTTCACCAGCAACCAACTGGTCATTCAGCCCAGCGGAATTGCATCGACGGGAA ATTTCTACCTCAAGGATAATCGCAACCCGGCGGATGGGAGAAGGATCGCGGTCAATGCCGCCGGCCGGCCGATAATTTCC TCGTGGGACAGTTCAACCTCCACCTATAAATGA
Upstream 100 bases:
>100_bases CAGCTAAGATTAAGGGGTTTGGGGGAAGAAGGTCTGGTTTATCGTCTGGCACTATGCTTGCTTCCCTTGGTAAACGACCA CAGAACAGACAGGATCAGAG
Downstream 100 bases:
>100_bases GGGCGCTATGAAGGCCGTTGCGAATAATGGCTTATTTTTTCGAAGCAATGCAGGTTTCTCCCTGCTTGAGGCACTGATTG CCATTGCTATCCTATCCGTG
Product: N-terminal methylation
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MISKAHNNRGFSLIELIVTVAIIGILAGIGTVMYLRELPLYRLKDATRLLFSDIQSARICALRNGAPCTLEQFPTNGNGY RIVQNGTVLKTIDLGGFTGVSFGSLNADAPAPDSGTFTSNQLVIQPSGIASTGNFYLKDNRNPADGRRIAVNAAGRPIIS SWDSSTSTYK
Sequences:
>Translated_170_residues MISKAHNNRGFSLIELIVTVAIIGILAGIGTVMYLRELPLYRLKDATRLLFSDIQSARICALRNGAPCTLEQFPTNGNGY RIVQNGTVLKTIDLGGFTGVSFGSLNADAPAPDSGTFTSNQLVIQPSGIASTGNFYLKDNRNPADGRRIAVNAAGRPIIS SWDSSTSTYK >Mature_170_residues MISKAHNNRGFSLIELIVTVAIIGILAGIGTVMYLRELPLYRLKDATRLLFSDIQSARICALRNGAPCTLEQFPTNGNGY RIVQNGTVLKTIDLGGFTGVSFGSLNADAPAPDSGTFTSNQLVIQPSGIASTGNFYLKDNRNPADGRRIAVNAAGRPIIS SWDSSTSTYK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18181; Mature: 18181
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISKAHNNRGFSLIELIVTVAIIGILAGIGTVMYLRELPLYRLKDATRLLFSDIQSARIC CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEE ALRNGAPCTLEQFPTNGNGYRIVQNGTVLKTIDLGGFTGVSFGSLNADAPAPDSGTFTSN EECCCCCCCCEECCCCCCCEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC QLVIQPSGIASTGNFYLKDNRNPADGRRIAVNAAGRPIISSWDSSTSTYK EEEECCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCEEECCCCCCCCCC >Mature Secondary Structure MISKAHNNRGFSLIELIVTVAIIGILAGIGTVMYLRELPLYRLKDATRLLFSDIQSARIC CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEE ALRNGAPCTLEQFPTNGNGYRIVQNGTVLKTIDLGGFTGVSFGSLNADAPAPDSGTFTSN EECCCCCCCCEECCCCCCCEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC QLVIQPSGIASTGNFYLKDNRNPADGRRIAVNAAGRPIISSWDSSTSTYK EEEECCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA