| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is iorB [H]
Identifier: 78222169
GI number: 78222169
Start: 1053191
End: 1053736
Strand: Direct
Name: iorB [H]
Synonym: Gmet_0949
Alternate gene names: 78222169
Gene position: 1053191-1053736 (Clockwise)
Preceding gene: 78222168
Following gene: 78222170
Centisome position: 26.35
GC content: 65.38
Gene sequence:
>546_bases ATGACCGGTCAGCAGCTCATCATCAGTGGCGTCGGCGGCCAGGGAATCCTCTTCCTGACCCGCATCCTCGCCGAAACCGC TATCAGCCTGGGGATGCCGGTCATGACCTCCGAGACCCACGGCATGGCCCAGCGGGGGGGAGTGGTCATCTCCCACCTGA AAGCGGGGGAGTTTTCGAGCCCCCTCGTGAGACCGGGGCGCGCCGACGGACTCATCGCCATGAAGGCGGAGAACGTGGCG ATCCACCGTCATTTCCTTCGTCCCGGCGGCTGGGTCGTCGTGAACGCCAAGGCCGCGCCGGCTGGCCTCGACGGCCATCC GGTCCATGTCATCGATGCTGATACCCTTGCCCTGGAGCTCGGCAATCCCCAGTCCCTCAACCTGATCCTTATCGGCTATG CCGTGGCGCGGTTCGCCGCCTCGGGAGACTTCTTCTCTCCCGACCAGGTCATCGGGACCATAGAACGGCGCCTGGTCGAG AAGGGGAAGCTGCGGGACGCTTCCCTGGCGGCCCTTCGTCTGGGGATGGAGAATGCAGCAGGCTGA
Upstream 100 bases:
>100_bases ACGAGGAGGAGAAGCGGGTCGCCATCGACACCCTCATCTGCACCGACTGCGGTGTCTGCATCGACGTCTGCCCGCGGCTG GCAATCGAGGAGGTGGGACA
Downstream 100 bases:
>100_bases TTTTCGTCCGGAGGTTTCATAAACGATGCTCACACGTTTTCCCGCCCCCTTTTCTTCCCCTGCCGACCTTGAACGGCTGC AGCTTGCCGGCGTGCAATGG
Product: indolepyruvate oxidoreductase subunit B
Products: NA
Alternate protein names: IOR; Indolepyruvate ferredoxin oxidoreductase subunit beta [H]
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MTGQQLIISGVGGQGILFLTRILAETAISLGMPVMTSETHGMAQRGGVVISHLKAGEFSSPLVRPGRADGLIAMKAENVA IHRHFLRPGGWVVVNAKAAPAGLDGHPVHVIDADTLALELGNPQSLNLILIGYAVARFAASGDFFSPDQVIGTIERRLVE KGKLRDASLAALRLGMENAAG
Sequences:
>Translated_181_residues MTGQQLIISGVGGQGILFLTRILAETAISLGMPVMTSETHGMAQRGGVVISHLKAGEFSSPLVRPGRADGLIAMKAENVA IHRHFLRPGGWVVVNAKAAPAGLDGHPVHVIDADTLALELGNPQSLNLILIGYAVARFAASGDFFSPDQVIGTIERRLVE KGKLRDASLAALRLGMENAAG >Mature_180_residues TGQQLIISGVGGQGILFLTRILAETAISLGMPVMTSETHGMAQRGGVVISHLKAGEFSSPLVRPGRADGLIAMKAENVAI HRHFLRPGGWVVVNAKAAPAGLDGHPVHVIDADTLALELGNPQSLNLILIGYAVARFAASGDFFSPDQVIGTIERRLVEK GKLRDASLAALRLGMENAAG
Specific function: Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates [H]
COG id: COG1014
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017719 - InterPro: IPR019752 - InterPro: IPR002869 [H]
Pfam domain/function: PF01558 POR [H]
EC number: =1.2.7.8 [H]
Molecular weight: Translated: 18935; Mature: 18804
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGQQLIISGVGGQGILFLTRILAETAISLGMPVMTSETHGMAQRGGVVISHLKAGEFSS CCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHCCEEEEEECCCCCCC PLVRPGRADGLIAMKAENVAIHRHFLRPGGWVVVNAKAAPAGLDGHPVHVIDADTLALEL CCCCCCCCCCEEEEECCCEEEEEEECCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEEC GNPQSLNLILIGYAVARFAASGDFFSPDQVIGTIERRLVEKGKLRDASLAALRLGMENAA CCCCCEEEEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHCCC G C >Mature Secondary Structure TGQQLIISGVGGQGILFLTRILAETAISLGMPVMTSETHGMAQRGGVVISHLKAGEFSS CCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHCCEEEEEECCCCCCC PLVRPGRADGLIAMKAENVAIHRHFLRPGGWVVVNAKAAPAGLDGHPVHVIDADTLALEL CCCCCCCCCCEEEEECCCEEEEEEECCCCCEEEEECCCCCCCCCCCEEEEEECCEEEEEC GNPQSLNLILIGYAVARFAASGDFFSPDQVIGTIERRLVEKGKLRDASLAALRLGMENAA CCCCCEEEEEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHCCC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12622808 [H]