Click here to switch to the map view.

The map label for this gene is recN [H]

Identifier: 78222162

GI number: 78222162

Start: 1045594

End: 1047258

Strand: Direct

Name: recN [H]

Synonym: Gmet_0942

Alternate gene names: 78222162

Gene position: 1045594-1047258 (Clockwise)

Preceding gene: 78222161

Following gene: 78222163

Centisome position: 26.16

GC content: 66.97

Gene sequence:

>1665_bases
GTGCTCATCGACCTCTCCATCAGAAACTTCGCCATCATCGATACTCTCCATGTTCCGTTCCAGCCGGGGCTTACGGTCTT
TACCGGCGAGACCGGCGCGGGAAAGTCGATCATCATCGACGCGGTAAACCTCATCATGGGGGGGCGTGCTTCCGCCGACC
TGATCCGGACCGGCGCCGAGGAGGCCACCGTGGAGGCGGTCTTTGCGCTCCCCGAAGGTTCCCCTCTTGGTGCCCGCCTG
GCCGATGCGGGGATCGAGTGCGACGGCGAGCTCCTGGTGAAACGGGTCGTGTCCCGCTCGGGACGCAACCGGGTCTTCGT
GGGGGGCGGCCTCTCCACCCAGGCGATTCTCGCCGACATGGCCCGGGAGCTCGTCAATATCTACGGCCAGCATGAGTCCC
AGACCCTCCTGCGGACCGACAACCACCTGACCCTCCTGGACGGTTTCGGGGGGCTTCTCCCTCTCCGGGAGTCCTATGGC
GCCCTCTATGCCGATTACCGCGCTACCCTTGATCAAATCCGGGCGCTGGAGGAGGGGGAGCGGGAGGCGGCCCGGCGGCT
CGATCTCCTGTCGTTCCAGGCAAGCGAGATTCGTGAGGCGGCCCTGCACCCCGGCGAGGATGCGGATCTGGAGCGGGAGC
GGGGGCTCCTGGCCCACGGCGAAAAGCTCCTCTTCGCCAGCCAGGAGGCCTATGCGGCCCTCTACGGGGACGATGGTGCC
GTGCTCGACCGGCTGGCCGAGGTGAAGGGAAAGGTGGCCGAGATAGCCGGCATTGACGCATCCCTCGGACCGCTCATGGA
TTCCCTGGCGGATGCCGCCGCCCAGTTGGAAGATGCCGCCATGACCCTCAGGGATTACTCCTCGCGGGTCGAGGCCGATC
CCGCCCGGTTGGAGCGGGTGGAGGAGCGGCTCGACCTGATCCGGCGGCTCAAGAAGAAATATGCCCCGACCGTGGAGGAG
ATCGTCGCCTACGGCGAGGAGGCGGCCCGCGAGATGGAACACCTTGAAAACCGTGAGCGAACCCGCGGTGAGCTGGACGC
GGCCCTGGAGAGGCTGCGGAAGGAGCTTGCGGCAAAGGGGGGGGAGCTTTCGGCGAAGCGCCGCGCCGTGGCGAAGGAGT
TGCAAAAGGCCATGGAGCGGGAGATTCACCAGCTTGCCATGAAACACGCCCTTTTCGAGGTCGCCTTCGAGGAGTTTTCC
GAGCCGCGGGCCACGGGGCTTGAGCGGGCCGAGTTTCTCTTTTCCCCCAACCCGGGGGAGGAACCGAAGCCCCTGACGAA
GATCGCCTCGGGCGGGGAGCTTTCCCGGCTCATGCTGGCCCTCAAACAGGTCCATCCGGAGAGCGACGTGCCGACGCTTG
TGTTCGATGAGGTGGACACCGGCATCGGCGGCGCCACGTCGGCCCTGGTGGGGGAAAAGCTCAAGCGGGTCAGCAGGGGG
CAGCAGGTCCTCTGCATAACCCATCTTCCCCAGGTGGCGGCCTTTGCCGACCACCACTACCTGGTGGAGAAGCGGGTGGA
GGGGGGGCGGACCGCCACCGCCGTCACCCCGTTGGAAGGGGAGGCCCGGGTGGCGGAGATGGCCCGGATGCTGGGGGGAG
TCACCATCACCGACCGGACCCTGGAGCATGCCCGCGAGATGATAGCCCACGGGGCCGGGGCGTAG

Upstream 100 bases:

>100_bases
TCCGGGTGCGCCGGGCCGAGCACCGCACGCGCCTCGTTATGTCGCGGAGCAAGGACTATTTCGAGGTTCTCAGGACCAAG
CTCAAGTGGGGTGAGCGGTA

Downstream 100 bases:

>100_bases
AAACGACCCAGCCGTTCACGGAGACGAAACCCGATGCAGACGATACCCATAGCCCTTGCCGAGCCGGAAATGGCCCTTGC
CCGCGACGTGAGGCGGACCG

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 554; Mature: 554

Protein sequence:

>554_residues
MLIDLSIRNFAIIDTLHVPFQPGLTVFTGETGAGKSIIIDAVNLIMGGRASADLIRTGAEEATVEAVFALPEGSPLGARL
ADAGIECDGELLVKRVVSRSGRNRVFVGGGLSTQAILADMARELVNIYGQHESQTLLRTDNHLTLLDGFGGLLPLRESYG
ALYADYRATLDQIRALEEGEREAARRLDLLSFQASEIREAALHPGEDADLERERGLLAHGEKLLFASQEAYAALYGDDGA
VLDRLAEVKGKVAEIAGIDASLGPLMDSLADAAAQLEDAAMTLRDYSSRVEADPARLERVEERLDLIRRLKKKYAPTVEE
IVAYGEEAAREMEHLENRERTRGELDAALERLRKELAAKGGELSAKRRAVAKELQKAMEREIHQLAMKHALFEVAFEEFS
EPRATGLERAEFLFSPNPGEEPKPLTKIASGGELSRLMLALKQVHPESDVPTLVFDEVDTGIGGATSALVGEKLKRVSRG
QQVLCITHLPQVAAFADHHYLVEKRVEGGRTATAVTPLEGEARVAEMARMLGGVTITDRTLEHAREMIAHGAGA

Sequences:

>Translated_554_residues
MLIDLSIRNFAIIDTLHVPFQPGLTVFTGETGAGKSIIIDAVNLIMGGRASADLIRTGAEEATVEAVFALPEGSPLGARL
ADAGIECDGELLVKRVVSRSGRNRVFVGGGLSTQAILADMARELVNIYGQHESQTLLRTDNHLTLLDGFGGLLPLRESYG
ALYADYRATLDQIRALEEGEREAARRLDLLSFQASEIREAALHPGEDADLERERGLLAHGEKLLFASQEAYAALYGDDGA
VLDRLAEVKGKVAEIAGIDASLGPLMDSLADAAAQLEDAAMTLRDYSSRVEADPARLERVEERLDLIRRLKKKYAPTVEE
IVAYGEEAAREMEHLENRERTRGELDAALERLRKELAAKGGELSAKRRAVAKELQKAMEREIHQLAMKHALFEVAFEEFS
EPRATGLERAEFLFSPNPGEEPKPLTKIASGGELSRLMLALKQVHPESDVPTLVFDEVDTGIGGATSALVGEKLKRVSRG
QQVLCITHLPQVAAFADHHYLVEKRVEGGRTATAVTPLEGEARVAEMARMLGGVTITDRTLEHAREMIAHGAGA
>Mature_554_residues
MLIDLSIRNFAIIDTLHVPFQPGLTVFTGETGAGKSIIIDAVNLIMGGRASADLIRTGAEEATVEAVFALPEGSPLGARL
ADAGIECDGELLVKRVVSRSGRNRVFVGGGLSTQAILADMARELVNIYGQHESQTLLRTDNHLTLLDGFGGLLPLRESYG
ALYADYRATLDQIRALEEGEREAARRLDLLSFQASEIREAALHPGEDADLERERGLLAHGEKLLFASQEAYAALYGDDGA
VLDRLAEVKGKVAEIAGIDASLGPLMDSLADAAAQLEDAAMTLRDYSSRVEADPARLERVEERLDLIRRLKKKYAPTVEE
IVAYGEEAAREMEHLENRERTRGELDAALERLRKELAAKGGELSAKRRAVAKELQKAMEREIHQLAMKHALFEVAFEEFS
EPRATGLERAEFLFSPNPGEEPKPLTKIASGGELSRLMLALKQVHPESDVPTLVFDEVDTGIGGATSALVGEKLKRVSRG
QQVLCITHLPQVAAFADHHYLVEKRVEGGRTATAVTPLEGEARVAEMARMLGGVTITDRTLEHAREMIAHGAGA

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=554, Percent_Identity=36.4620938628159, Blast_Score=337, Evalue=8e-94,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 60199; Mature: 60199

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIDLSIRNFAIIDTLHVPFQPGLTVFTGETGAGKSIIIDAVNLIMGGRASADLIRTGAE
CEEEEECCCEEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCH
EATVEAVFALPEGSPLGARLADAGIECDGELLVKRVVSRSGRNRVFVGGGLSTQAILADM
HHHEEEEEECCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHH
ARELVNIYGQHESQTLLRTDNHLTLLDGFGGLLPLRESYGALYADYRATLDQIRALEEGE
HHHHHHHHCCCCCCHHEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
REAARRLDLLSFQASEIREAALHPGEDADLERERGLLAHGEKLLFASQEAYAALYGDDGA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHCCCEEEEECCCHHEEEECCCHH
VLDRLAEVKGKVAEIAGIDASLGPLMDSLADAAAQLEDAAMTLRDYSSRVEADPARLERV
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
EERLDLIRRLKKKYAPTVEEIVAYGEEAAREMEHLENRERTRGELDAALERLRKELAAKG
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GELSAKRRAVAKELQKAMEREIHQLAMKHALFEVAFEEFSEPRATGLERAEFLFSPNPGE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHEECCCCCC
EPKPLTKIASGGELSRLMLALKQVHPESDVPTLVFDEVDTGIGGATSALVGEKLKRVSRG
CCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCC
QQVLCITHLPQVAAFADHHYLVEKRVEGGRTATAVTPLEGEARVAEMARMLGGVTITDRT
CEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEHHH
LEHAREMIAHGAGA
HHHHHHHHHCCCCC
>Mature Secondary Structure
MLIDLSIRNFAIIDTLHVPFQPGLTVFTGETGAGKSIIIDAVNLIMGGRASADLIRTGAE
CEEEEECCCEEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCH
EATVEAVFALPEGSPLGARLADAGIECDGELLVKRVVSRSGRNRVFVGGGLSTQAILADM
HHHEEEEEECCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHH
ARELVNIYGQHESQTLLRTDNHLTLLDGFGGLLPLRESYGALYADYRATLDQIRALEEGE
HHHHHHHHCCCCCCHHEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
REAARRLDLLSFQASEIREAALHPGEDADLERERGLLAHGEKLLFASQEAYAALYGDDGA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHCCCEEEEECCCHHEEEECCCHH
VLDRLAEVKGKVAEIAGIDASLGPLMDSLADAAAQLEDAAMTLRDYSSRVEADPARLERV
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
EERLDLIRRLKKKYAPTVEEIVAYGEEAAREMEHLENRERTRGELDAALERLRKELAAKG
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GELSAKRRAVAKELQKAMEREIHQLAMKHALFEVAFEEFSEPRATGLERAEFLFSPNPGE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHEECCCCCC
EPKPLTKIASGGELSRLMLALKQVHPESDVPTLVFDEVDTGIGGATSALVGEKLKRVSRG
CCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCC
QQVLCITHLPQVAAFADHHYLVEKRVEGGRTATAVTPLEGEARVAEMARMLGGVTITDRT
CEEEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEHHH
LEHAREMIAHGAGA
HHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]