| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is glgP [H]
Identifier: 78222160
GI number: 78222160
Start: 1042085
End: 1044601
Strand: Reverse
Name: glgP [H]
Synonym: Gmet_0940
Alternate gene names: 78222160
Gene position: 1044601-1042085 (Counterclockwise)
Preceding gene: 78222178
Following gene: 78222159
Centisome position: 26.13
GC content: 59.91
Gene sequence:
>2517_bases ATGACTGATGAAGCGTTTCCGAGCGAATCCGGCTCCCCTGAACTCGACACCATGATGCTCATCATCAAGTCTTTCCTTGA GCACCTGGAGTACACCCTGGGCAAGGACAAGTACTCCGCTACCCGCCACGATATCTTCAACGCCCTCGCCTACGCCGTCC GCGACCGGATGGTGGAACGGTGGCTCGACACCCAGCAGGCCTACTACAACGAGGACCCCAAACGCATTTACTACGTATCC ATGGAGTTTCTCATGGGGAAGACCCTTGAGAACAGCCTGGTGAATCTGGGGCTTCTCGCGGAGTTCCGGGAGGCCATGAA CTCGCTCGGCTATGACCTCGATGAGTTCATCGAACGGGAGCAGGACGCGGGGCTCGGCAACGGAGGGCTGGGGCGGCTTG CGGCCTGCTTCCTCGACTCCATGGCCACCATGGGGGTTCCGGGGTACGGCTACGGCATCCGGTACGAGTACGGCATCTTC CGCCAGAACATCATTGACGGTTCCCAGGTGGAAATCCCCGACAACTGGCTCCGTTATCGAAACCCTTGGGAGATGGACCG CCAGGAGCACCTCCACCCGGTCAAGTTCTACGGCAGGGTTGTGGAGCGCAAGGACACCGAAGGCAATACCCTCTTCGACT GGATCGACACCGAGGACGTCATGGCCATGGCCTACGACACCCCCATCCCCGGCTACGGCACCAACACCGTCAACACCATG CGGCTGTGGACCGCCAAGTCGACCCGGGAATTCGACCTCTCCTTCTTCAACGAAGGGAATTACATCCGTGCCGTCGAAAA GAAGATGCTCACCGAAAACATCTCCAAGGTCCTCTACCCGGCCGACAACGTGCCGGAGGGGAAGGAACTCCGCTTCAAAC AGGAGTACTTCCTGGCCTGCGCCACGGTTCACGACGTTATCTACCGCTTTCACAAACAGCACGAGGACCTGCGGCGTCTC CCCGAAAAGGCTGCCATCCAGTTGAACGACACCCATCCGGCCCTCTGCATCCCCGAGATGATGCGGGTCCTCATCGACCA CCACCGGCTCGATTGGGAGACCGCCTGGAATATCACCACCAGGACCTTCGCCTACACCAACCACACCATCCTCCCCGAGG CCTTGGAGAAGTGGCCGGTCTGGTTCTTCGAACATATCCTCCCCCGCCACATCCAGATCATCTATGAAATCAACGATCGT TTCCTGACTGCGGTCCGCACGCGCTTTCCCGGCGACACGGGCAAGCTGGAACGGATGTCCCTCATCGAGGAACACTGGGA GCGAAAGGTGCGGATGGCGAACCTGGCCGTGGTGGGGAGCCACTCGGTGAACGGCGTGGCGGCACTCCACACGGAGATTA TCAAGGAACACGTCTTCAAGGATTTCTTCGAGATGTACCCGGAGCGGTTCAACAACAAGACCAATGGCATCACCCAGCGC CGCTGGCTCAAGTGCGCCAACCCGGACCAGGCGCGCCTCATCGGCGACACCATCGGCAACGGCTGGACCACCGACCTCTA CAAGCTCACCCAGCTCCGTCCTCTGGTCGACGATCCGGCCTTTATGGCCCAGTGGCAGCAGGTGAAGCGGACCAACAAGG ACAAGCTTGCCGAGTATATCCTGAAGCACAACTGTATTCAGGTGAACGCCGACTCCCTGTTTGACTGCCAGGTGAAGCGG ATCCACGAATATAAGCGGCAACTGCTGAACGTGCTCCACGTCATCACCCTGTACAACCGTATCAAGGCGAACCCCGACGG CGACTTCGTCCCCCGCACGATAATCTTCAGCGGCAAGGCGGCCCCGGCCTATGCCATCGCCAAGCTGATTATCAGGCTCA TCAATGCCGTGGGAGATGTAATCAACAACGACTCCCAGGTTGGGGACCGCCTCAAGGTGGTCTTTCTCGCTAACTACAGC GTTTCCCTGGCTGAGAAAATCTTCCCGGCCGCCGATCTTTCGGAACAGATCTCCACCGCCGGAACCGAGGCGTCGGGGAC TGGCAATATGAAATTCGCCCTGAACGGGGCGCTCACCATCGGCACCCTCGATGGCGCCAACATCGAGATCATGGAGGAAG TGGGGCGCGACAACATCTTCATCTTCGGCATGAACGCCGACGAGGTGGAGGACCTGCGCCGCAGGGGCTACAACCCGAGG GATTACTACAGCCGCAACCCCGAGCTGAAAAAGGTTTTGGACATGATCGCCGAGGGGTACTTCTTCCCCGCCAACCGCGA CCTCTTCCGCCCCATTGTCGACTCCCTCCTCAACCAGGGAGACCACTACATGCTCCTGGCCGATTACGCCTCCTACGTGG CCTGTCAGGAGGAGGTCAGCCGCCTCTACCTGGACCGGGAACAGTGGGCCCGCAAGGCCATCCTCAACTGCGCCGGCATG GGGAAGTTTTCCAGCGACCGGACCATCGCCGAGTACGCCCGGGAGATCTGGGACGTGGAGCCCTTTGAAGTCCACCCGGT CCTGGAGTACCGCCAGCACGACGTGATACCCGACTGA
Upstream 100 bases:
>100_bases AGCATAGATCAGGGGGCATGTCCAATGGAATTCCGCCATTTGGGGGTACTGCCTTCTCCCGAACGACCCGGTTTCCACCC CCCTCCCCTGAGGTGACCCC
Downstream 100 bases:
>100_bases GCAGAATCAGACCGATGACCGATCTTTTCGACGCCACCGCCGCAACCGAAACCGGCAGGGATGCCCCCCTGGCCGAACGG ATGCGCCCCCGCACCCTCGA
Product: glycogen/starch/alpha-glucan phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 838; Mature: 837
Protein sequence:
>838_residues MTDEAFPSESGSPELDTMMLIIKSFLEHLEYTLGKDKYSATRHDIFNALAYAVRDRMVERWLDTQQAYYNEDPKRIYYVS MEFLMGKTLENSLVNLGLLAEFREAMNSLGYDLDEFIEREQDAGLGNGGLGRLAACFLDSMATMGVPGYGYGIRYEYGIF RQNIIDGSQVEIPDNWLRYRNPWEMDRQEHLHPVKFYGRVVERKDTEGNTLFDWIDTEDVMAMAYDTPIPGYGTNTVNTM RLWTAKSTREFDLSFFNEGNYIRAVEKKMLTENISKVLYPADNVPEGKELRFKQEYFLACATVHDVIYRFHKQHEDLRRL PEKAAIQLNDTHPALCIPEMMRVLIDHHRLDWETAWNITTRTFAYTNHTILPEALEKWPVWFFEHILPRHIQIIYEINDR FLTAVRTRFPGDTGKLERMSLIEEHWERKVRMANLAVVGSHSVNGVAALHTEIIKEHVFKDFFEMYPERFNNKTNGITQR RWLKCANPDQARLIGDTIGNGWTTDLYKLTQLRPLVDDPAFMAQWQQVKRTNKDKLAEYILKHNCIQVNADSLFDCQVKR IHEYKRQLLNVLHVITLYNRIKANPDGDFVPRTIIFSGKAAPAYAIAKLIIRLINAVGDVINNDSQVGDRLKVVFLANYS VSLAEKIFPAADLSEQISTAGTEASGTGNMKFALNGALTIGTLDGANIEIMEEVGRDNIFIFGMNADEVEDLRRRGYNPR DYYSRNPELKKVLDMIAEGYFFPANRDLFRPIVDSLLNQGDHYMLLADYASYVACQEEVSRLYLDREQWARKAILNCAGM GKFSSDRTIAEYAREIWDVEPFEVHPVLEYRQHDVIPD
Sequences:
>Translated_838_residues MTDEAFPSESGSPELDTMMLIIKSFLEHLEYTLGKDKYSATRHDIFNALAYAVRDRMVERWLDTQQAYYNEDPKRIYYVS MEFLMGKTLENSLVNLGLLAEFREAMNSLGYDLDEFIEREQDAGLGNGGLGRLAACFLDSMATMGVPGYGYGIRYEYGIF RQNIIDGSQVEIPDNWLRYRNPWEMDRQEHLHPVKFYGRVVERKDTEGNTLFDWIDTEDVMAMAYDTPIPGYGTNTVNTM RLWTAKSTREFDLSFFNEGNYIRAVEKKMLTENISKVLYPADNVPEGKELRFKQEYFLACATVHDVIYRFHKQHEDLRRL PEKAAIQLNDTHPALCIPEMMRVLIDHHRLDWETAWNITTRTFAYTNHTILPEALEKWPVWFFEHILPRHIQIIYEINDR FLTAVRTRFPGDTGKLERMSLIEEHWERKVRMANLAVVGSHSVNGVAALHTEIIKEHVFKDFFEMYPERFNNKTNGITQR RWLKCANPDQARLIGDTIGNGWTTDLYKLTQLRPLVDDPAFMAQWQQVKRTNKDKLAEYILKHNCIQVNADSLFDCQVKR IHEYKRQLLNVLHVITLYNRIKANPDGDFVPRTIIFSGKAAPAYAIAKLIIRLINAVGDVINNDSQVGDRLKVVFLANYS VSLAEKIFPAADLSEQISTAGTEASGTGNMKFALNGALTIGTLDGANIEIMEEVGRDNIFIFGMNADEVEDLRRRGYNPR DYYSRNPELKKVLDMIAEGYFFPANRDLFRPIVDSLLNQGDHYMLLADYASYVACQEEVSRLYLDREQWARKAILNCAGM GKFSSDRTIAEYAREIWDVEPFEVHPVLEYRQHDVIPD >Mature_837_residues TDEAFPSESGSPELDTMMLIIKSFLEHLEYTLGKDKYSATRHDIFNALAYAVRDRMVERWLDTQQAYYNEDPKRIYYVSM EFLMGKTLENSLVNLGLLAEFREAMNSLGYDLDEFIEREQDAGLGNGGLGRLAACFLDSMATMGVPGYGYGIRYEYGIFR QNIIDGSQVEIPDNWLRYRNPWEMDRQEHLHPVKFYGRVVERKDTEGNTLFDWIDTEDVMAMAYDTPIPGYGTNTVNTMR LWTAKSTREFDLSFFNEGNYIRAVEKKMLTENISKVLYPADNVPEGKELRFKQEYFLACATVHDVIYRFHKQHEDLRRLP EKAAIQLNDTHPALCIPEMMRVLIDHHRLDWETAWNITTRTFAYTNHTILPEALEKWPVWFFEHILPRHIQIIYEINDRF LTAVRTRFPGDTGKLERMSLIEEHWERKVRMANLAVVGSHSVNGVAALHTEIIKEHVFKDFFEMYPERFNNKTNGITQRR WLKCANPDQARLIGDTIGNGWTTDLYKLTQLRPLVDDPAFMAQWQQVKRTNKDKLAEYILKHNCIQVNADSLFDCQVKRI HEYKRQLLNVLHVITLYNRIKANPDGDFVPRTIIFSGKAAPAYAIAKLIIRLINAVGDVINNDSQVGDRLKVVFLANYSV SLAEKIFPAADLSEQISTAGTEASGTGNMKFALNGALTIGTLDGANIEIMEEVGRDNIFIFGMNADEVEDLRRRGYNPRD YYSRNPELKKVLDMIAEGYFFPANRDLFRPIVDSLLNQGDHYMLLADYASYVACQEEVSRLYLDREQWARKAILNCAGMG KFSSDRTIAEYAREIWDVEPFEVHPVLEYRQHDVIPD
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI5032009, Length=822, Percent_Identity=57.2992700729927, Blast_Score=932, Evalue=0.0, Organism=Homo sapiens, GI21361370, Length=826, Percent_Identity=57.5060532687651, Blast_Score=929, Evalue=0.0, Organism=Homo sapiens, GI71037379, Length=821, Percent_Identity=55.9074299634592, Blast_Score=909, Evalue=0.0, Organism=Homo sapiens, GI255653002, Length=821, Percent_Identity=53.836784409257, Blast_Score=853, Evalue=0.0, Organism=Homo sapiens, GI257900462, Length=668, Percent_Identity=57.185628742515, Blast_Score=788, Evalue=0.0, Organism=Escherichia coli, GI2367228, Length=819, Percent_Identity=54.2124542124542, Blast_Score=889, Evalue=0.0, Organism=Escherichia coli, GI48994936, Length=748, Percent_Identity=46.7914438502674, Blast_Score=719, Evalue=0.0, Organism=Caenorhabditis elegans, GI17564550, Length=827, Percent_Identity=54.776299879081, Blast_Score=927, Evalue=0.0, Organism=Caenorhabditis elegans, GI32566204, Length=827, Percent_Identity=54.776299879081, Blast_Score=926, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6325418, Length=834, Percent_Identity=50.599520383693, Blast_Score=785, Evalue=0.0, Organism=Drosophila melanogaster, GI78706832, Length=822, Percent_Identity=57.9075425790754, Blast_Score=955, Evalue=0.0, Organism=Drosophila melanogaster, GI24581010, Length=822, Percent_Identity=57.9075425790754, Blast_Score=955, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011833 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 96989; Mature: 96858
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: PS00102 PHOSPHORYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDEAFPSESGSPELDTMMLIIKSFLEHLEYTLGKDKYSATRHDIFNALAYAVRDRMVER CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH WLDTQQAYYNEDPKRIYYVSMEFLMGKTLENSLVNLGLLAEFREAMNSLGYDLDEFIERE HHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH QDAGLGNGGLGRLAACFLDSMATMGVPGYGYGIRYEYGIFRQNIIDGSQVEIPDNWLRYR HCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHCCCCCEEECCHHHHHCC NPWEMDRQEHLHPVKFYGRVVERKDTEGNTLFDWIDTEDVMAMAYDTPIPGYGTNTVNTM CCCCCCHHHCCCHHHHHHHHHHCCCCCCCEEEEECCCCHHEEEEECCCCCCCCCCCCEEE RLWTAKSTREFDLSFFNEGNYIRAVEKKMLTENISKVLYPADNVPEGKELRFKQEYFLAC EEEECCCCCEECCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH ATVHDVIYRFHKQHEDLRRLPEKAAIQLNDTHPALCIPEMMRVLIDHHRLDWETAWNITT HHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCHHHHHHHHHHHHHHCCCCHHCCCCEE RTFAYTNHTILPEALEKWPVWFFEHILPRHIQIIYEINDRFLTAVRTRFPGDTGKLERMS EEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHCCCCCCCHHHHH LIEEHWERKVRMANLAVVGSHSVNGVAALHTEIIKEHVFKDFFEMYPERFNNKTNGITQR HHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH RWLKCANPDQARLIGDTIGNGWTTDLYKLTQLRPLVDDPAFMAQWQQVKRTNKDKLAEYI HHHCCCCCCHHHEEHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHH LKHNCIQVNADSLFDCQVKRIHEYKRQLLNVLHVITLYNRIKANPDGDFVPRTIIFSGKA HHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCC APAYAIAKLIIRLINAVGDVINNDSQVGDRLKVVFLANYSVSLAEKIFPAADLSEQISTA CHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEEEEEECCCHHHHHHHCCCCCHHHHHHHC GTEASGTGNMKFALNGALTIGTLDGANIEIMEEVGRDNIFIFGMNADEVEDLRRRGYNPR CCCCCCCCCEEEEEECEEEEEECCCCCHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCCC DYYSRNPELKKVLDMIAEGYFFPANRDLFRPIVDSLLNQGDHYMLLADYASYVACQEEVS HHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHH RLYLDREQWARKAILNCAGMGKFSSDRTIAEYAREIWDVEPFEVHPVLEYRQHDVIPD HHHHCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEECHHHHHHCCCCCCC >Mature Secondary Structure TDEAFPSESGSPELDTMMLIIKSFLEHLEYTLGKDKYSATRHDIFNALAYAVRDRMVER CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH WLDTQQAYYNEDPKRIYYVSMEFLMGKTLENSLVNLGLLAEFREAMNSLGYDLDEFIERE HHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH QDAGLGNGGLGRLAACFLDSMATMGVPGYGYGIRYEYGIFRQNIIDGSQVEIPDNWLRYR HCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHCCCCCEEECCHHHHHCC NPWEMDRQEHLHPVKFYGRVVERKDTEGNTLFDWIDTEDVMAMAYDTPIPGYGTNTVNTM CCCCCCHHHCCCHHHHHHHHHHCCCCCCCEEEEECCCCHHEEEEECCCCCCCCCCCCEEE RLWTAKSTREFDLSFFNEGNYIRAVEKKMLTENISKVLYPADNVPEGKELRFKQEYFLAC EEEECCCCCEECCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH ATVHDVIYRFHKQHEDLRRLPEKAAIQLNDTHPALCIPEMMRVLIDHHRLDWETAWNITT HHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCHHHHHHHHHHHHHHCCCCHHCCCCEE RTFAYTNHTILPEALEKWPVWFFEHILPRHIQIIYEINDRFLTAVRTRFPGDTGKLERMS EEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHCCCCCCCHHHHH LIEEHWERKVRMANLAVVGSHSVNGVAALHTEIIKEHVFKDFFEMYPERFNNKTNGITQR HHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH RWLKCANPDQARLIGDTIGNGWTTDLYKLTQLRPLVDDPAFMAQWQQVKRTNKDKLAEYI HHHCCCCCCHHHEEHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHH LKHNCIQVNADSLFDCQVKRIHEYKRQLLNVLHVITLYNRIKANPDGDFVPRTIIFSGKA HHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCC APAYAIAKLIIRLINAVGDVINNDSQVGDRLKVVFLANYSVSLAEKIFPAADLSEQISTA CHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEEEEEECCCHHHHHHHCCCCCHHHHHHHC GTEASGTGNMKFALNGALTIGTLDGANIEIMEEVGRDNIFIFGMNADEVEDLRRRGYNPR CCCCCCCCCEEEEEECEEEEEECCCCCHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCCC DYYSRNPELKKVLDMIAEGYFFPANRDLFRPIVDSLLNQGDHYMLLADYASYVACQEEVS HHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHH RLYLDREQWARKAILNCAGMGKFSSDRTIAEYAREIWDVEPFEVHPVLEYRQHDVIPD HHHHCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEECHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]