Definition Geobacter metallireducens GS-15 chromosome, complete genome.
Accession NC_007517
Length 3,997,420

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The map label for this gene is glgP [H]

Identifier: 78222160

GI number: 78222160

Start: 1042085

End: 1044601

Strand: Reverse

Name: glgP [H]

Synonym: Gmet_0940

Alternate gene names: 78222160

Gene position: 1044601-1042085 (Counterclockwise)

Preceding gene: 78222178

Following gene: 78222159

Centisome position: 26.13

GC content: 59.91

Gene sequence:

>2517_bases
ATGACTGATGAAGCGTTTCCGAGCGAATCCGGCTCCCCTGAACTCGACACCATGATGCTCATCATCAAGTCTTTCCTTGA
GCACCTGGAGTACACCCTGGGCAAGGACAAGTACTCCGCTACCCGCCACGATATCTTCAACGCCCTCGCCTACGCCGTCC
GCGACCGGATGGTGGAACGGTGGCTCGACACCCAGCAGGCCTACTACAACGAGGACCCCAAACGCATTTACTACGTATCC
ATGGAGTTTCTCATGGGGAAGACCCTTGAGAACAGCCTGGTGAATCTGGGGCTTCTCGCGGAGTTCCGGGAGGCCATGAA
CTCGCTCGGCTATGACCTCGATGAGTTCATCGAACGGGAGCAGGACGCGGGGCTCGGCAACGGAGGGCTGGGGCGGCTTG
CGGCCTGCTTCCTCGACTCCATGGCCACCATGGGGGTTCCGGGGTACGGCTACGGCATCCGGTACGAGTACGGCATCTTC
CGCCAGAACATCATTGACGGTTCCCAGGTGGAAATCCCCGACAACTGGCTCCGTTATCGAAACCCTTGGGAGATGGACCG
CCAGGAGCACCTCCACCCGGTCAAGTTCTACGGCAGGGTTGTGGAGCGCAAGGACACCGAAGGCAATACCCTCTTCGACT
GGATCGACACCGAGGACGTCATGGCCATGGCCTACGACACCCCCATCCCCGGCTACGGCACCAACACCGTCAACACCATG
CGGCTGTGGACCGCCAAGTCGACCCGGGAATTCGACCTCTCCTTCTTCAACGAAGGGAATTACATCCGTGCCGTCGAAAA
GAAGATGCTCACCGAAAACATCTCCAAGGTCCTCTACCCGGCCGACAACGTGCCGGAGGGGAAGGAACTCCGCTTCAAAC
AGGAGTACTTCCTGGCCTGCGCCACGGTTCACGACGTTATCTACCGCTTTCACAAACAGCACGAGGACCTGCGGCGTCTC
CCCGAAAAGGCTGCCATCCAGTTGAACGACACCCATCCGGCCCTCTGCATCCCCGAGATGATGCGGGTCCTCATCGACCA
CCACCGGCTCGATTGGGAGACCGCCTGGAATATCACCACCAGGACCTTCGCCTACACCAACCACACCATCCTCCCCGAGG
CCTTGGAGAAGTGGCCGGTCTGGTTCTTCGAACATATCCTCCCCCGCCACATCCAGATCATCTATGAAATCAACGATCGT
TTCCTGACTGCGGTCCGCACGCGCTTTCCCGGCGACACGGGCAAGCTGGAACGGATGTCCCTCATCGAGGAACACTGGGA
GCGAAAGGTGCGGATGGCGAACCTGGCCGTGGTGGGGAGCCACTCGGTGAACGGCGTGGCGGCACTCCACACGGAGATTA
TCAAGGAACACGTCTTCAAGGATTTCTTCGAGATGTACCCGGAGCGGTTCAACAACAAGACCAATGGCATCACCCAGCGC
CGCTGGCTCAAGTGCGCCAACCCGGACCAGGCGCGCCTCATCGGCGACACCATCGGCAACGGCTGGACCACCGACCTCTA
CAAGCTCACCCAGCTCCGTCCTCTGGTCGACGATCCGGCCTTTATGGCCCAGTGGCAGCAGGTGAAGCGGACCAACAAGG
ACAAGCTTGCCGAGTATATCCTGAAGCACAACTGTATTCAGGTGAACGCCGACTCCCTGTTTGACTGCCAGGTGAAGCGG
ATCCACGAATATAAGCGGCAACTGCTGAACGTGCTCCACGTCATCACCCTGTACAACCGTATCAAGGCGAACCCCGACGG
CGACTTCGTCCCCCGCACGATAATCTTCAGCGGCAAGGCGGCCCCGGCCTATGCCATCGCCAAGCTGATTATCAGGCTCA
TCAATGCCGTGGGAGATGTAATCAACAACGACTCCCAGGTTGGGGACCGCCTCAAGGTGGTCTTTCTCGCTAACTACAGC
GTTTCCCTGGCTGAGAAAATCTTCCCGGCCGCCGATCTTTCGGAACAGATCTCCACCGCCGGAACCGAGGCGTCGGGGAC
TGGCAATATGAAATTCGCCCTGAACGGGGCGCTCACCATCGGCACCCTCGATGGCGCCAACATCGAGATCATGGAGGAAG
TGGGGCGCGACAACATCTTCATCTTCGGCATGAACGCCGACGAGGTGGAGGACCTGCGCCGCAGGGGCTACAACCCGAGG
GATTACTACAGCCGCAACCCCGAGCTGAAAAAGGTTTTGGACATGATCGCCGAGGGGTACTTCTTCCCCGCCAACCGCGA
CCTCTTCCGCCCCATTGTCGACTCCCTCCTCAACCAGGGAGACCACTACATGCTCCTGGCCGATTACGCCTCCTACGTGG
CCTGTCAGGAGGAGGTCAGCCGCCTCTACCTGGACCGGGAACAGTGGGCCCGCAAGGCCATCCTCAACTGCGCCGGCATG
GGGAAGTTTTCCAGCGACCGGACCATCGCCGAGTACGCCCGGGAGATCTGGGACGTGGAGCCCTTTGAAGTCCACCCGGT
CCTGGAGTACCGCCAGCACGACGTGATACCCGACTGA

Upstream 100 bases:

>100_bases
AGCATAGATCAGGGGGCATGTCCAATGGAATTCCGCCATTTGGGGGTACTGCCTTCTCCCGAACGACCCGGTTTCCACCC
CCCTCCCCTGAGGTGACCCC

Downstream 100 bases:

>100_bases
GCAGAATCAGACCGATGACCGATCTTTTCGACGCCACCGCCGCAACCGAAACCGGCAGGGATGCCCCCCTGGCCGAACGG
ATGCGCCCCCGCACCCTCGA

Product: glycogen/starch/alpha-glucan phosphorylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 838; Mature: 837

Protein sequence:

>838_residues
MTDEAFPSESGSPELDTMMLIIKSFLEHLEYTLGKDKYSATRHDIFNALAYAVRDRMVERWLDTQQAYYNEDPKRIYYVS
MEFLMGKTLENSLVNLGLLAEFREAMNSLGYDLDEFIEREQDAGLGNGGLGRLAACFLDSMATMGVPGYGYGIRYEYGIF
RQNIIDGSQVEIPDNWLRYRNPWEMDRQEHLHPVKFYGRVVERKDTEGNTLFDWIDTEDVMAMAYDTPIPGYGTNTVNTM
RLWTAKSTREFDLSFFNEGNYIRAVEKKMLTENISKVLYPADNVPEGKELRFKQEYFLACATVHDVIYRFHKQHEDLRRL
PEKAAIQLNDTHPALCIPEMMRVLIDHHRLDWETAWNITTRTFAYTNHTILPEALEKWPVWFFEHILPRHIQIIYEINDR
FLTAVRTRFPGDTGKLERMSLIEEHWERKVRMANLAVVGSHSVNGVAALHTEIIKEHVFKDFFEMYPERFNNKTNGITQR
RWLKCANPDQARLIGDTIGNGWTTDLYKLTQLRPLVDDPAFMAQWQQVKRTNKDKLAEYILKHNCIQVNADSLFDCQVKR
IHEYKRQLLNVLHVITLYNRIKANPDGDFVPRTIIFSGKAAPAYAIAKLIIRLINAVGDVINNDSQVGDRLKVVFLANYS
VSLAEKIFPAADLSEQISTAGTEASGTGNMKFALNGALTIGTLDGANIEIMEEVGRDNIFIFGMNADEVEDLRRRGYNPR
DYYSRNPELKKVLDMIAEGYFFPANRDLFRPIVDSLLNQGDHYMLLADYASYVACQEEVSRLYLDREQWARKAILNCAGM
GKFSSDRTIAEYAREIWDVEPFEVHPVLEYRQHDVIPD

Sequences:

>Translated_838_residues
MTDEAFPSESGSPELDTMMLIIKSFLEHLEYTLGKDKYSATRHDIFNALAYAVRDRMVERWLDTQQAYYNEDPKRIYYVS
MEFLMGKTLENSLVNLGLLAEFREAMNSLGYDLDEFIEREQDAGLGNGGLGRLAACFLDSMATMGVPGYGYGIRYEYGIF
RQNIIDGSQVEIPDNWLRYRNPWEMDRQEHLHPVKFYGRVVERKDTEGNTLFDWIDTEDVMAMAYDTPIPGYGTNTVNTM
RLWTAKSTREFDLSFFNEGNYIRAVEKKMLTENISKVLYPADNVPEGKELRFKQEYFLACATVHDVIYRFHKQHEDLRRL
PEKAAIQLNDTHPALCIPEMMRVLIDHHRLDWETAWNITTRTFAYTNHTILPEALEKWPVWFFEHILPRHIQIIYEINDR
FLTAVRTRFPGDTGKLERMSLIEEHWERKVRMANLAVVGSHSVNGVAALHTEIIKEHVFKDFFEMYPERFNNKTNGITQR
RWLKCANPDQARLIGDTIGNGWTTDLYKLTQLRPLVDDPAFMAQWQQVKRTNKDKLAEYILKHNCIQVNADSLFDCQVKR
IHEYKRQLLNVLHVITLYNRIKANPDGDFVPRTIIFSGKAAPAYAIAKLIIRLINAVGDVINNDSQVGDRLKVVFLANYS
VSLAEKIFPAADLSEQISTAGTEASGTGNMKFALNGALTIGTLDGANIEIMEEVGRDNIFIFGMNADEVEDLRRRGYNPR
DYYSRNPELKKVLDMIAEGYFFPANRDLFRPIVDSLLNQGDHYMLLADYASYVACQEEVSRLYLDREQWARKAILNCAGM
GKFSSDRTIAEYAREIWDVEPFEVHPVLEYRQHDVIPD
>Mature_837_residues
TDEAFPSESGSPELDTMMLIIKSFLEHLEYTLGKDKYSATRHDIFNALAYAVRDRMVERWLDTQQAYYNEDPKRIYYVSM
EFLMGKTLENSLVNLGLLAEFREAMNSLGYDLDEFIEREQDAGLGNGGLGRLAACFLDSMATMGVPGYGYGIRYEYGIFR
QNIIDGSQVEIPDNWLRYRNPWEMDRQEHLHPVKFYGRVVERKDTEGNTLFDWIDTEDVMAMAYDTPIPGYGTNTVNTMR
LWTAKSTREFDLSFFNEGNYIRAVEKKMLTENISKVLYPADNVPEGKELRFKQEYFLACATVHDVIYRFHKQHEDLRRLP
EKAAIQLNDTHPALCIPEMMRVLIDHHRLDWETAWNITTRTFAYTNHTILPEALEKWPVWFFEHILPRHIQIIYEINDRF
LTAVRTRFPGDTGKLERMSLIEEHWERKVRMANLAVVGSHSVNGVAALHTEIIKEHVFKDFFEMYPERFNNKTNGITQRR
WLKCANPDQARLIGDTIGNGWTTDLYKLTQLRPLVDDPAFMAQWQQVKRTNKDKLAEYILKHNCIQVNADSLFDCQVKRI
HEYKRQLLNVLHVITLYNRIKANPDGDFVPRTIIFSGKAAPAYAIAKLIIRLINAVGDVINNDSQVGDRLKVVFLANYSV
SLAEKIFPAADLSEQISTAGTEASGTGNMKFALNGALTIGTLDGANIEIMEEVGRDNIFIFGMNADEVEDLRRRGYNPRD
YYSRNPELKKVLDMIAEGYFFPANRDLFRPIVDSLLNQGDHYMLLADYASYVACQEEVSRLYLDREQWARKAILNCAGMG
KFSSDRTIAEYAREIWDVEPFEVHPVLEYRQHDVIPD

Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [

COG id: COG0058

COG function: function code G; Glucan phosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycogen phosphorylase family [H]

Homologues:

Organism=Homo sapiens, GI5032009, Length=822, Percent_Identity=57.2992700729927, Blast_Score=932, Evalue=0.0,
Organism=Homo sapiens, GI21361370, Length=826, Percent_Identity=57.5060532687651, Blast_Score=929, Evalue=0.0,
Organism=Homo sapiens, GI71037379, Length=821, Percent_Identity=55.9074299634592, Blast_Score=909, Evalue=0.0,
Organism=Homo sapiens, GI255653002, Length=821, Percent_Identity=53.836784409257, Blast_Score=853, Evalue=0.0,
Organism=Homo sapiens, GI257900462, Length=668, Percent_Identity=57.185628742515, Blast_Score=788, Evalue=0.0,
Organism=Escherichia coli, GI2367228, Length=819, Percent_Identity=54.2124542124542, Blast_Score=889, Evalue=0.0,
Organism=Escherichia coli, GI48994936, Length=748, Percent_Identity=46.7914438502674, Blast_Score=719, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17564550, Length=827, Percent_Identity=54.776299879081, Blast_Score=927, Evalue=0.0,
Organism=Caenorhabditis elegans, GI32566204, Length=827, Percent_Identity=54.776299879081, Blast_Score=926, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6325418, Length=834, Percent_Identity=50.599520383693, Blast_Score=785, Evalue=0.0,
Organism=Drosophila melanogaster, GI78706832, Length=822, Percent_Identity=57.9075425790754, Blast_Score=955, Evalue=0.0,
Organism=Drosophila melanogaster, GI24581010, Length=822, Percent_Identity=57.9075425790754, Blast_Score=955, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011833
- InterPro:   IPR000811 [H]

Pfam domain/function: PF00343 Phosphorylase [H]

EC number: =2.4.1.1 [H]

Molecular weight: Translated: 96989; Mature: 96858

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: PS00102 PHOSPHORYLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDEAFPSESGSPELDTMMLIIKSFLEHLEYTLGKDKYSATRHDIFNALAYAVRDRMVER
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
WLDTQQAYYNEDPKRIYYVSMEFLMGKTLENSLVNLGLLAEFREAMNSLGYDLDEFIERE
HHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
QDAGLGNGGLGRLAACFLDSMATMGVPGYGYGIRYEYGIFRQNIIDGSQVEIPDNWLRYR
HCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHCCCCCEEECCHHHHHCC
NPWEMDRQEHLHPVKFYGRVVERKDTEGNTLFDWIDTEDVMAMAYDTPIPGYGTNTVNTM
CCCCCCHHHCCCHHHHHHHHHHCCCCCCCEEEEECCCCHHEEEEECCCCCCCCCCCCEEE
RLWTAKSTREFDLSFFNEGNYIRAVEKKMLTENISKVLYPADNVPEGKELRFKQEYFLAC
EEEECCCCCEECCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
ATVHDVIYRFHKQHEDLRRLPEKAAIQLNDTHPALCIPEMMRVLIDHHRLDWETAWNITT
HHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCHHHHHHHHHHHHHHCCCCHHCCCCEE
RTFAYTNHTILPEALEKWPVWFFEHILPRHIQIIYEINDRFLTAVRTRFPGDTGKLERMS
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHCCCCCCCHHHHH
LIEEHWERKVRMANLAVVGSHSVNGVAALHTEIIKEHVFKDFFEMYPERFNNKTNGITQR
HHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
RWLKCANPDQARLIGDTIGNGWTTDLYKLTQLRPLVDDPAFMAQWQQVKRTNKDKLAEYI
HHHCCCCCCHHHEEHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHH
LKHNCIQVNADSLFDCQVKRIHEYKRQLLNVLHVITLYNRIKANPDGDFVPRTIIFSGKA
HHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCC
APAYAIAKLIIRLINAVGDVINNDSQVGDRLKVVFLANYSVSLAEKIFPAADLSEQISTA
CHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEEEEEECCCHHHHHHHCCCCCHHHHHHHC
GTEASGTGNMKFALNGALTIGTLDGANIEIMEEVGRDNIFIFGMNADEVEDLRRRGYNPR
CCCCCCCCCEEEEEECEEEEEECCCCCHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCCC
DYYSRNPELKKVLDMIAEGYFFPANRDLFRPIVDSLLNQGDHYMLLADYASYVACQEEVS
HHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHH
RLYLDREQWARKAILNCAGMGKFSSDRTIAEYAREIWDVEPFEVHPVLEYRQHDVIPD
HHHHCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEECHHHHHHCCCCCCC
>Mature Secondary Structure 
TDEAFPSESGSPELDTMMLIIKSFLEHLEYTLGKDKYSATRHDIFNALAYAVRDRMVER
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
WLDTQQAYYNEDPKRIYYVSMEFLMGKTLENSLVNLGLLAEFREAMNSLGYDLDEFIERE
HHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
QDAGLGNGGLGRLAACFLDSMATMGVPGYGYGIRYEYGIFRQNIIDGSQVEIPDNWLRYR
HCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHCCCCCEEECCHHHHHCC
NPWEMDRQEHLHPVKFYGRVVERKDTEGNTLFDWIDTEDVMAMAYDTPIPGYGTNTVNTM
CCCCCCHHHCCCHHHHHHHHHHCCCCCCCEEEEECCCCHHEEEEECCCCCCCCCCCCEEE
RLWTAKSTREFDLSFFNEGNYIRAVEKKMLTENISKVLYPADNVPEGKELRFKQEYFLAC
EEEECCCCCEECCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
ATVHDVIYRFHKQHEDLRRLPEKAAIQLNDTHPALCIPEMMRVLIDHHRLDWETAWNITT
HHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCHHHHHHHHHHHHHHCCCCHHCCCCEE
RTFAYTNHTILPEALEKWPVWFFEHILPRHIQIIYEINDRFLTAVRTRFPGDTGKLERMS
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHCCCCCCCHHHHH
LIEEHWERKVRMANLAVVGSHSVNGVAALHTEIIKEHVFKDFFEMYPERFNNKTNGITQR
HHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
RWLKCANPDQARLIGDTIGNGWTTDLYKLTQLRPLVDDPAFMAQWQQVKRTNKDKLAEYI
HHHCCCCCCHHHEEHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHH
LKHNCIQVNADSLFDCQVKRIHEYKRQLLNVLHVITLYNRIKANPDGDFVPRTIIFSGKA
HHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCC
APAYAIAKLIIRLINAVGDVINNDSQVGDRLKVVFLANYSVSLAEKIFPAADLSEQISTA
CHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEEEEEECCCHHHHHHHCCCCCHHHHHHHC
GTEASGTGNMKFALNGALTIGTLDGANIEIMEEVGRDNIFIFGMNADEVEDLRRRGYNPR
CCCCCCCCCEEEEEECEEEEEECCCCCHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCCC
DYYSRNPELKKVLDMIAEGYFFPANRDLFRPIVDSLLNQGDHYMLLADYASYVACQEEVS
HHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHH
RLYLDREQWARKAILNCAGMGKFSSDRTIAEYAREIWDVEPFEVHPVLEYRQHDVIPD
HHHHCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCEECHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362 [H]