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The map label for this gene is smf [H]

Identifier: 78222110

GI number: 78222110

Start: 980811

End: 981887

Strand: Direct

Name: smf [H]

Synonym: Gmet_0890

Alternate gene names: 78222110

Gene position: 980811-981887 (Clockwise)

Preceding gene: 78222109

Following gene: 78222111

Centisome position: 24.54

GC content: 67.13

Gene sequence:

>1077_bases
ATGGATCATTATCACTGGTTTGCCCTCAAATCCGTCCCCCTCGTGGGGAACGTCCTCTTCCGGCGGCTCCTGGAGCGCTT
CGGCTCCCCCGAGGCGGTCTTCGGAGCGTCCGATGTCGATCTCCGTTCCGTCAAGGGGGTGAGTCCGGCGGTGGTGGCCT
CCCTCCGAAGCCATGACCCGCACCCCTTTGCCGACCGGGAGTGTGCGGCGGTCAGGCGCACGGGGTGCCGCATCGTAACC
ATCCTCGATGATGAGTATCCACCGCTCCTGCGGGAGATCGCCGACCCGCCCCCCTTCCTTTATGTGCGGGGAAGCCTCGC
CGGTATCGGCACTTCCGTGGCGGTGGTGGGTTCCCGTCGGGCCTCTGCCTATGGCAGGACGGTGACCGAGCGCATGGCCG
AGGAGCTTGCCCGGAACGGTGTCACCGTGATTTCCGGCCTGGCTCGCGGGGTCGACACCGCGGCCCACCGGGGAGCCCTG
AAAGGGGATGGGACAACCGTCGGGGTGCTCGGGTGCGGCGTGGACGTGGTCTATCCGGCCGAGAACCGGCAGCTCTTCCG
AGAGATGGCCGAACAGGGAGCGGTGGTGTCCGAGTTCCCCCTGGGGACCGCCCCCCTGGCCGAGAACTTCCCCCGTCGAA
ACCGGATCATCAGCGGCATCTCCCACGGGGTCCTCGTGGTGGAGGCGGCGGAGCGGAGCGGCTCCCTGGTCACGGCCCGC
ATCGCCCTCGACCAGGGGCGCGATGTCTACGCCATTCCCGGCAACATCACCAGCGACGGGAGCCGGGGGGCTAACCGCCT
CATCCGCGAGGGGGCGAAGCTGGTGGAAAGCGTGGAGGATATCCTGGAAGAACTCCCCGGGGGAAGGGTGGCCCGCAGGG
GAGTGCCGGCGCCGGCGCCCGACCTCCCGCCTGCCGAGGCGGCGGTCTTTGCGCTCCTGGCCCCTGAGCCGCTCCATATC
GATGAGATCATTGCCAAAAGCGCGTTGACAGTGGGGGAGCTTTCGGCTATGTTGTTGCGCCTGGAACTCAAGGGGGCCGT
AACTCAGCTTCCCGGCAAGTATTTTTGCACAAATTGA

Upstream 100 bases:

>100_bases
GACACCATCTACCGGGGGGACCGGGTAGAGGCCAGGACAAACAGATAACCCCTTCTTTGCGGGGGCCGGTCCGGCCGGTC
CCCGCTTCTCGTTCTTGCCC

Downstream 100 bases:

>100_bases
CCCGCCTGGCATGCCAGGCGTTACTTACCTATTATTGGATTTTTTTTATGCCACAACACCTCGTCATCGTCGAATCTCCG
GCCAAGGCCAAGACCATCGA

Product: SMF protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MDHYHWFALKSVPLVGNVLFRRLLERFGSPEAVFGASDVDLRSVKGVSPAVVASLRSHDPHPFADRECAAVRRTGCRIVT
ILDDEYPPLLREIADPPPFLYVRGSLAGIGTSVAVVGSRRASAYGRTVTERMAEELARNGVTVISGLARGVDTAAHRGAL
KGDGTTVGVLGCGVDVVYPAENRQLFREMAEQGAVVSEFPLGTAPLAENFPRRNRIISGISHGVLVVEAAERSGSLVTAR
IALDQGRDVYAIPGNITSDGSRGANRLIREGAKLVESVEDILEELPGGRVARRGVPAPAPDLPPAEAAVFALLAPEPLHI
DEIIAKSALTVGELSAMLLRLELKGAVTQLPGKYFCTN

Sequences:

>Translated_358_residues
MDHYHWFALKSVPLVGNVLFRRLLERFGSPEAVFGASDVDLRSVKGVSPAVVASLRSHDPHPFADRECAAVRRTGCRIVT
ILDDEYPPLLREIADPPPFLYVRGSLAGIGTSVAVVGSRRASAYGRTVTERMAEELARNGVTVISGLARGVDTAAHRGAL
KGDGTTVGVLGCGVDVVYPAENRQLFREMAEQGAVVSEFPLGTAPLAENFPRRNRIISGISHGVLVVEAAERSGSLVTAR
IALDQGRDVYAIPGNITSDGSRGANRLIREGAKLVESVEDILEELPGGRVARRGVPAPAPDLPPAEAAVFALLAPEPLHI
DEIIAKSALTVGELSAMLLRLELKGAVTQLPGKYFCTN
>Mature_358_residues
MDHYHWFALKSVPLVGNVLFRRLLERFGSPEAVFGASDVDLRSVKGVSPAVVASLRSHDPHPFADRECAAVRRTGCRIVT
ILDDEYPPLLREIADPPPFLYVRGSLAGIGTSVAVVGSRRASAYGRTVTERMAEELARNGVTVISGLARGVDTAAHRGAL
KGDGTTVGVLGCGVDVVYPAENRQLFREMAEQGAVVSEFPLGTAPLAENFPRRNRIISGISHGVLVVEAAERSGSLVTAR
IALDQGRDVYAIPGNITSDGSRGANRLIREGAKLVESVEDILEELPGGRVARRGVPAPAPDLPPAEAAVFALLAPEPLHI
DEIIAKSALTVGELSAMLLRLELKGAVTQLPGKYFCTN

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=280, Percent_Identity=46.4285714285714, Blast_Score=206, Evalue=2e-54,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488
- InterPro:   IPR010994 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 38105; Mature: 38105

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHYHWFALKSVPLVGNVLFRRLLERFGSPEAVFGASDVDLRSVKGVSPAVVASLRSHDP
CCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHCCCCHHHHHHHHCCCC
HPFADRECAAVRRTGCRIVTILDDEYPPLLREIADPPPFLYVRGSLAGIGTSVAVVGSRR
CCCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHCCCCCEEEEECCHHCCCCEEEEECCCH
ASAYGRTVTERMAEELARNGVTVISGLARGVDTAAHRGALKGDGTTVGVLGCGVDVVYPA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEEEECC
ENRQLFREMAEQGAVVSEFPLGTAPLAENFPRRNRIISGISHGVLVVEAAERSGSLVTAR
CHHHHHHHHHHCCCEEEECCCCCCCHHHCCCHHHHHHHHCCCCEEEEEECCCCCCEEEEE
IALDQGRDVYAIPGNITSDGSRGANRLIREGAKLVESVEDILEELPGGRVARRGVPAPAP
EEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCC
DLPPAEAAVFALLAPEPLHIDEIIAKSALTVGELSAMLLRLELKGAVTQLPGKYFCTN
CCCCHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCC
>Mature Secondary Structure
MDHYHWFALKSVPLVGNVLFRRLLERFGSPEAVFGASDVDLRSVKGVSPAVVASLRSHDP
CCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHCCCCHHHHHHHHCCCC
HPFADRECAAVRRTGCRIVTILDDEYPPLLREIADPPPFLYVRGSLAGIGTSVAVVGSRR
CCCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHCCCCCEEEEECCHHCCCCEEEEECCCH
ASAYGRTVTERMAEELARNGVTVISGLARGVDTAAHRGALKGDGTTVGVLGCGVDVVYPA
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEEEECC
ENRQLFREMAEQGAVVSEFPLGTAPLAENFPRRNRIISGISHGVLVVEAAERSGSLVTAR
CHHHHHHHHHHCCCEEEECCCCCCCHHHCCCHHHHHHHHCCCCEEEEEECCCCCCEEEEE
IALDQGRDVYAIPGNITSDGSRGANRLIREGAKLVESVEDILEELPGGRVARRGVPAPAP
EEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCC
DLPPAEAAVFALLAPEPLHIDEIIAKSALTVGELSAMLLRLELKGAVTQLPGKYFCTN
CCCCHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]