| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222101
Identifier: 78222101
GI number: 78222101
Start: 970433
End: 971257
Strand: Reverse
Name: 78222101
Synonym: Gmet_0881
Alternate gene names: NA
Gene position: 971257-970433 (Counterclockwise)
Preceding gene: 78222102
Following gene: 78222097
Centisome position: 24.3
GC content: 59.88
Gene sequence:
>825_bases ATGATCGATTTCGCCGCCTATGCCCTTTCGGGGGAACTGGACCTGAACCGCTTGGCGGGGTCCCTCGGATTTCCCCGGCG CTATCGCTGGGAAGAGCCCATGGTGCTCGACCTGACAAGCCTCAGACCTCTTCCGGGGGATATGGGAGAAACCAAGAGGG TCTATCTCTACTACTTCGGCGGGGTGGTCTTCGTGAACTGCACGGAGGAGGAGATCGGCTCTTTCTTCTGGAGCATGGGG CACCATGGGGAGGCATTTAAGGAGTACCCTGCCGTCCGGTACCGGGACGAGTATTCCCTGAAGCGGGGGGAGGGGGAACG GGTTGAGGTCACCAACGACGTGGCGACCATGCCGGGGTACGATCCGGCCTACGTGGACACCATCTGTTTCGTCATCGCCA AGTCGGTGGCCCTGGAGCGGATCGAGGAGCGGGTTGACCAGGTTCTCGACGAGATGGAAACCATCATCGCCCTTCTCGAC CGGGGGAAGTTGGGAATCTCGGACCGGCGCCTGGCAAAGCTGGCGGCCAACGTCCTCACCTACAAATACCAGTCCATCTC CCACATCATGGTCCTGGAGAAGCCGGAATTCACCTGGGAGAACCCCGTGGCAGACCGGCTCTACCTGACCATGGCCAACA TCTTTGAGCTGAACCAGCGCTACAACGAGATCAAGCACAAGGGGGAGACGCTCCTGGACATCACCGGCGTCTTCACGAGC CTCGCCCACGCCCGCCGCGCCTCACGGCTGGAATGGATCATCATCATCCTCATCTTCATCGAGATCGTGATCTACATCTT CGAGCTGATGCGCAAGACAGGCTAA
Upstream 100 bases:
>100_bases GGAAGGCGTACCGGAGTGTACGCCTTTTTTCATTTCTCCAGGGGAGGTCAGGATTTGCGTCCACGTATCCCGTCGGGTAA GCTTTTTTCAGGAGGATGCG
Downstream 100 bases:
>100_bases AATCCGCCGCACAGGGCGAAATGCTCACCCTCCCGGGCAGTTGTGTCGAAGTGCTTGTGGCAGGCTCCGCAGCTCACAAC ACCGACAGCGAATTTCTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MIDFAAYALSGELDLNRLAGSLGFPRRYRWEEPMVLDLTSLRPLPGDMGETKRVYLYYFGGVVFVNCTEEEIGSFFWSMG HHGEAFKEYPAVRYRDEYSLKRGEGERVEVTNDVATMPGYDPAYVDTICFVIAKSVALERIEERVDQVLDEMETIIALLD RGKLGISDRRLAKLAANVLTYKYQSISHIMVLEKPEFTWENPVADRLYLTMANIFELNQRYNEIKHKGETLLDITGVFTS LAHARRASRLEWIIIILIFIEIVIYIFELMRKTG
Sequences:
>Translated_274_residues MIDFAAYALSGELDLNRLAGSLGFPRRYRWEEPMVLDLTSLRPLPGDMGETKRVYLYYFGGVVFVNCTEEEIGSFFWSMG HHGEAFKEYPAVRYRDEYSLKRGEGERVEVTNDVATMPGYDPAYVDTICFVIAKSVALERIEERVDQVLDEMETIIALLD RGKLGISDRRLAKLAANVLTYKYQSISHIMVLEKPEFTWENPVADRLYLTMANIFELNQRYNEIKHKGETLLDITGVFTS LAHARRASRLEWIIIILIFIEIVIYIFELMRKTG >Mature_274_residues MIDFAAYALSGELDLNRLAGSLGFPRRYRWEEPMVLDLTSLRPLPGDMGETKRVYLYYFGGVVFVNCTEEEIGSFFWSMG HHGEAFKEYPAVRYRDEYSLKRGEGERVEVTNDVATMPGYDPAYVDTICFVIAKSVALERIEERVDQVLDEMETIIALLD RGKLGISDRRLAKLAANVLTYKYQSISHIMVLEKPEFTWENPVADRLYLTMANIFELNQRYNEIKHKGETLLDITGVFTS LAHARRASRLEWIIIILIFIEIVIYIFELMRKTG
Specific function: Unknown
COG id: COG1723
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31648; Mature: 31648
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDFAAYALSGELDLNRLAGSLGFPRRYRWEEPMVLDLTSLRPLPGDMGETKRVYLYYFG CCCCEEEEECCCCCHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEC GVVFVNCTEEEIGSFFWSMGHHGEAFKEYPAVRYRDEYSLKRGEGERVEVTNDVATMPGY CEEEEECCHHHHHHHHHHCCCCCCHHHHCCCCEECCCCCCCCCCCCEEEECCCCCCCCCC DPAYVDTICFVIAKSVALERIEERVDQVLDEMETIIALLDRGKLGISDRRLAKLAANVLT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH YKYQSISHIMVLEKPEFTWENPVADRLYLTMANIFELNQRYNEIKHKGETLLDITGVFTS HHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LAHARRASRLEWIIIILIFIEIVIYIFELMRKTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIDFAAYALSGELDLNRLAGSLGFPRRYRWEEPMVLDLTSLRPLPGDMGETKRVYLYYFG CCCCEEEEECCCCCHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEC GVVFVNCTEEEIGSFFWSMGHHGEAFKEYPAVRYRDEYSLKRGEGERVEVTNDVATMPGY CEEEEECCHHHHHHHHHHCCCCCCHHHHCCCCEECCCCCCCCCCCCEEEECCCCCCCCCC DPAYVDTICFVIAKSVALERIEERVDQVLDEMETIIALLDRGKLGISDRRLAKLAANVLT CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH YKYQSISHIMVLEKPEFTWENPVADRLYLTMANIFELNQRYNEIKHKGETLLDITGVFTS HHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LAHARRASRLEWIIIILIFIEIVIYIFELMRKTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA