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The map label for this gene is rpfG [H]

Identifier: 78222069

GI number: 78222069

Start: 934081

End: 936213

Strand: Reverse

Name: rpfG [H]

Synonym: Gmet_0849

Alternate gene names: 78222069

Gene position: 936213-934081 (Counterclockwise)

Preceding gene: 304570569

Following gene: 78222068

Centisome position: 23.42

GC content: 57.38

Gene sequence:

>2133_bases
ATGAATTCACTGAAAGTCAAAATACTCGGGACGATAACCCTTATTGTGTGCTTACTCGTCTCCGTAGTCAGCATCCTGGA
ATACCAGCACCAGAAACGGCTAATAACGCAGATATCCGCCCAAAACGCCGTCCTTCTTACCACGACGCTTCAAAGCACCA
TTGAGAACGTGATGATGAGTGGCCGGACCGACGAGGTGCAACGCATCCTCGGCCGGCTAAAGGAAAAGGACAAGATCGAG
AACCTGCGGATTTTTGACGAAGCGGGACGTATCCTCAACTCCGCCATCAAGCCGGAAATCGGCCTTCAGGTCGGTCCCGC
CGACCTTGCGATGTACAAGGAGGGAAAACGAATCGCTCTCGTTAATGTCGGCAACGAAGACAGCGACAAGATTTTCAAGA
GCATTGCCCCCATATATAACAAACCGGCGTGCCACGCCTGCCACGATGCCGGCACCACGCTCCTCGGCGCCCTTGAGGTT
GAGCTCTCCATAAGGTACCTTGAGTCGTATCTGGACCAGGACAAGTTCTTCATGTCGGTCTCGATGCTCACCATGGTCGT
CCTCATCCTCGCCACCATTTTCATTTTCCTCCACGCCTACGTGAACCGTCCGCTCAAGGCCATTATCTCGTCCATGCAAG
GGATAGAGCGGGGCGATTTCGACGTCAAGACCGATATTGCCAGCAGCACCGAGATGAAAGCCCTCTCCGACAACTTCAAC
ATGATGGTGAGCAAACTCCGCTACTTCGTAGACACCACCATCGGCCACGAACGGGAACTGGCACGGGCCCAGTCAAAACT
TGCCCATCACCACGAGATGCACCTCATGAACCAGAAGCTGGAGGATCAGCTCCGGGAGATCGAAAACCTCAACGTCGGCA
TGGAGGAGCGGATCGAGGAGATCGAGGAGGCCAACTACCGCATCGCCGACCTCGCCAGCGAACTCGAAGACAAGAACGTC
AACCTGGAGCGGGCCGTGGCCCGCCTCTCGACCCTGTACAAGGTTGGCCTTGCCGTCAACTCCACCATGGAGAGTAAAAA
GATCTTCGACCTCATCGTCCGCACTGCCGTTGAGACACTCAATGCTGAGATCGGTTATATCATTCTCTACAACCAGCAGG
GACGGAACCTGCTAGTCACCACGCTCCTGGGGCACGAAGTGACGCCGGAAGCCTCTACCATCCTGCAGATGAAGCCGTCG
AGCGTCTCGACCTGGGTCGTTGAAAACCGAACTCCGCTCCTCATTCCCGACATCAACGAGTTTCCCCAGTTCGACCGCTT
CAGCGCCCTGGGCTATGAGCGCAAAAACCTCATCTGCGCGCCGCTTATGATCAAGGACGAGATCATCGGCACCATCACCG
CCGTCAACAAGCGGGACAGTTCCACCTACAACGCGGAAGAACTGGAGCTTCTCGTCACCATCGCCGCCCAGGCGAGCATC
GCCATCAAGAACGCCCAGCTCTACGACGAGCAGCAGGCCACCTATCTCCATACGATCCAGGCACTGGTCTCCGCCATCGA
GGCCAGCGACAGCTACACCCGTGGCCATTCAGAGCGGGTGACCCGCTACTCTTTGGAGCTAGCCCGCAAACTGACGCTCC
CCCCCGAACGGCTCAAAATTATCGAGCGGGCCGCCATCCTCCATGACATCGGAAAGATCGGCATCGACCTGAACCTTCTC
CACAAAGAAGGAAAGCTCTCTCCCGAGGAAATTCACGACCTCCAGCAGCATCCAGTCATCGGCATGAGGATTCTGGAGCC
CATCGACTTCCTCCAGGACGTCCGCATCTGCATCGGCCAACACCACGAGCGGTACGACGGCCGGGGCTACCCGAACCGCA
TCCCTGCCGGCGAACTCCTTCTGGAGTCGCGCATCCTCGCCATCGCCGACGCCTTTGACGCCATGACATCAGACCGCCCC
TACCGCAAAGCGCTTCCCGTTGAAGCGGCGGCAAAGGAACTGATCGACCATGCCGGAGCCCAGTTCGACCCGGAACTGGT
GCCTCACTTTATCGAACTCATCGAGAGCGGCACCTTCGGCTTCTCCTGCGATAAATCCGACATGGAAGAGACCCCGATGC
GGGAACGGCGCAAAGTGGTCCCCCTCAGCGACTACGGCATCCGCATCGGTTGA

Upstream 100 bases:

>100_bases
ACAGGATTAGCACAAACTAACCGCCATATAGCCATATTTCAGACCCAAAACGGCCACGATAAACACCGGCGTTGCCAGGG
GCAGTCGGTATATTGACGCT

Downstream 100 bases:

>100_bases
CCCCTTCCCCTAATCCGTCATCGCATTACGATTTGCCCCCTTCCCGTGATCGTGGTATAAGGTCTCCCTGACCACCACGC
CACTCCGACAGCACAACTAT

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 710; Mature: 710

Protein sequence:

>710_residues
MNSLKVKILGTITLIVCLLVSVVSILEYQHQKRLITQISAQNAVLLTTTLQSTIENVMMSGRTDEVQRILGRLKEKDKIE
NLRIFDEAGRILNSAIKPEIGLQVGPADLAMYKEGKRIALVNVGNEDSDKIFKSIAPIYNKPACHACHDAGTTLLGALEV
ELSIRYLESYLDQDKFFMSVSMLTMVVLILATIFIFLHAYVNRPLKAIISSMQGIERGDFDVKTDIASSTEMKALSDNFN
MMVSKLRYFVDTTIGHERELARAQSKLAHHHEMHLMNQKLEDQLREIENLNVGMEERIEEIEEANYRIADLASELEDKNV
NLERAVARLSTLYKVGLAVNSTMESKKIFDLIVRTAVETLNAEIGYIILYNQQGRNLLVTTLLGHEVTPEASTILQMKPS
SVSTWVVENRTPLLIPDINEFPQFDRFSALGYERKNLICAPLMIKDEIIGTITAVNKRDSSTYNAEELELLVTIAAQASI
AIKNAQLYDEQQATYLHTIQALVSAIEASDSYTRGHSERVTRYSLELARKLTLPPERLKIIERAAILHDIGKIGIDLNLL
HKEGKLSPEEIHDLQQHPVIGMRILEPIDFLQDVRICIGQHHERYDGRGYPNRIPAGELLLESRILAIADAFDAMTSDRP
YRKALPVEAAAKELIDHAGAQFDPELVPHFIELIESGTFGFSCDKSDMEETPMRERRKVVPLSDYGIRIG

Sequences:

>Translated_710_residues
MNSLKVKILGTITLIVCLLVSVVSILEYQHQKRLITQISAQNAVLLTTTLQSTIENVMMSGRTDEVQRILGRLKEKDKIE
NLRIFDEAGRILNSAIKPEIGLQVGPADLAMYKEGKRIALVNVGNEDSDKIFKSIAPIYNKPACHACHDAGTTLLGALEV
ELSIRYLESYLDQDKFFMSVSMLTMVVLILATIFIFLHAYVNRPLKAIISSMQGIERGDFDVKTDIASSTEMKALSDNFN
MMVSKLRYFVDTTIGHERELARAQSKLAHHHEMHLMNQKLEDQLREIENLNVGMEERIEEIEEANYRIADLASELEDKNV
NLERAVARLSTLYKVGLAVNSTMESKKIFDLIVRTAVETLNAEIGYIILYNQQGRNLLVTTLLGHEVTPEASTILQMKPS
SVSTWVVENRTPLLIPDINEFPQFDRFSALGYERKNLICAPLMIKDEIIGTITAVNKRDSSTYNAEELELLVTIAAQASI
AIKNAQLYDEQQATYLHTIQALVSAIEASDSYTRGHSERVTRYSLELARKLTLPPERLKIIERAAILHDIGKIGIDLNLL
HKEGKLSPEEIHDLQQHPVIGMRILEPIDFLQDVRICIGQHHERYDGRGYPNRIPAGELLLESRILAIADAFDAMTSDRP
YRKALPVEAAAKELIDHAGAQFDPELVPHFIELIESGTFGFSCDKSDMEETPMRERRKVVPLSDYGIRIG
>Mature_710_residues
MNSLKVKILGTITLIVCLLVSVVSILEYQHQKRLITQISAQNAVLLTTTLQSTIENVMMSGRTDEVQRILGRLKEKDKIE
NLRIFDEAGRILNSAIKPEIGLQVGPADLAMYKEGKRIALVNVGNEDSDKIFKSIAPIYNKPACHACHDAGTTLLGALEV
ELSIRYLESYLDQDKFFMSVSMLTMVVLILATIFIFLHAYVNRPLKAIISSMQGIERGDFDVKTDIASSTEMKALSDNFN
MMVSKLRYFVDTTIGHERELARAQSKLAHHHEMHLMNQKLEDQLREIENLNVGMEERIEEIEEANYRIADLASELEDKNV
NLERAVARLSTLYKVGLAVNSTMESKKIFDLIVRTAVETLNAEIGYIILYNQQGRNLLVTTLLGHEVTPEASTILQMKPS
SVSTWVVENRTPLLIPDINEFPQFDRFSALGYERKNLICAPLMIKDEIIGTITAVNKRDSSTYNAEELELLVTIAAQASI
AIKNAQLYDEQQATYLHTIQALVSAIEASDSYTRGHSERVTRYSLELARKLTLPPERLKIIERAAILHDIGKIGIDLNLL
HKEGKLSPEEIHDLQQHPVIGMRILEPIDFLQDVRICIGQHHERYDGRGYPNRIPAGELLLESRILAIADAFDAMTSDRP
YRKALPVEAAAKELIDHAGAQFDPELVPHFIELIESGTFGFSCDKSDMEETPMRERRKVVPLSDYGIRIG

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 79942; Mature: 79942

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: PS50885 HAMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLKVKILGTITLIVCLLVSVVSILEYQHQKRLITQISAQNAVLLTTTLQSTIENVMMS
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHC
GRTDEVQRILGRLKEKDKIENLRIFDEAGRILNSAIKPEIGLQVGPADLAMYKEGKRIAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHCCCCEEEE
VNVGNEDSDKIFKSIAPIYNKPACHACHDAGTTLLGALEVELSIRYLESYLDQDKFFMSV
EECCCCCHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH
SMLTMVVLILATIFIFLHAYVNRPLKAIISSMQGIERGDFDVKTDIASSTEMKALSDNFN
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
MMVSKLRYFVDTTIGHERELARAQSKLAHHHEMHLMNQKLEDQLREIENLNVGMEERIEE
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
IEEANYRIADLASELEDKNVNLERAVARLSTLYKVGLAVNSTMESKKIFDLIVRTAVETL
HHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
NAEIGYIILYNQQGRNLLVTTLLGHEVTPEASTILQMKPSSVSTWVVENRTPLLIPDINE
CCCCCEEEEECCCCCEEEEEEECCCCCCCCHHHEEEECCCCCEEEEEECCCEEECCCCCC
FPQFDRFSALGYERKNLICAPLMIKDEIIGTITAVNKRDSSTYNAEELELLVTIAAQASI
CCCCCHHHHCCCCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHEEEHHHHHE
AIKNAQLYDEQQATYLHTIQALVSAIEASDSYTRGHSERVTRYSLELARKLTLPPERLKI
EEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH
IERAAILHDIGKIGIDLNLLHKEGKLSPEEIHDLQQHPVIGMRILEPIDFLQDVRICIGQ
HHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
HHERYDGRGYPNRIPAGELLLESRILAIADAFDAMTSDRPYRKALPVEAAAKELIDHAGA
CHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHCCC
QFDPELVPHFIELIESGTFGFSCDKSDMEETPMRERRKVVPLSDYGIRIG
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MNSLKVKILGTITLIVCLLVSVVSILEYQHQKRLITQISAQNAVLLTTTLQSTIENVMMS
CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHC
GRTDEVQRILGRLKEKDKIENLRIFDEAGRILNSAIKPEIGLQVGPADLAMYKEGKRIAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCHHHHHHCCCCEEEE
VNVGNEDSDKIFKSIAPIYNKPACHACHDAGTTLLGALEVELSIRYLESYLDQDKFFMSV
EECCCCCHHHHHHHHHHHCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH
SMLTMVVLILATIFIFLHAYVNRPLKAIISSMQGIERGDFDVKTDIASSTEMKALSDNFN
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
MMVSKLRYFVDTTIGHERELARAQSKLAHHHEMHLMNQKLEDQLREIENLNVGMEERIEE
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
IEEANYRIADLASELEDKNVNLERAVARLSTLYKVGLAVNSTMESKKIFDLIVRTAVETL
HHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
NAEIGYIILYNQQGRNLLVTTLLGHEVTPEASTILQMKPSSVSTWVVENRTPLLIPDINE
CCCCCEEEEECCCCCEEEEEEECCCCCCCCHHHEEEECCCCCEEEEEECCCEEECCCCCC
FPQFDRFSALGYERKNLICAPLMIKDEIIGTITAVNKRDSSTYNAEELELLVTIAAQASI
CCCCCHHHHCCCCCCCEEEECHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHEEEHHHHHE
AIKNAQLYDEQQATYLHTIQALVSAIEASDSYTRGHSERVTRYSLELARKLTLPPERLKI
EEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH
IERAAILHDIGKIGIDLNLLHKEGKLSPEEIHDLQQHPVIGMRILEPIDFLQDVRICIGQ
HHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
HHERYDGRGYPNRIPAGELLLESRILAIADAFDAMTSDRPYRKALPVEAAAKELIDHAGA
CHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHCCC
QFDPELVPHFIELIESGTFGFSCDKSDMEETPMRERRKVVPLSDYGIRIG
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]