| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222015
Identifier: 78222015
GI number: 78222015
Start: 875753
End: 876505
Strand: Reverse
Name: 78222015
Synonym: Gmet_0795
Alternate gene names: NA
Gene position: 876505-875753 (Counterclockwise)
Preceding gene: 78222016
Following gene: 78222012
Centisome position: 21.93
GC content: 66.4
Gene sequence:
>753_bases ATGGCACAGCAATTCAAGGACTATTTTTCCGAGAAATCGGACGTCTATCGTTCCTACCGCCCCGGCTACCCCACCGAGCT CTTCGCCTGGCTGGCGGGACTGCCGGCGCGGCGCGACGCGGCCCTGGACTGCGGCTGCGGCACCGGCCAGGCATCGGTAG CCCTGGCGGAACACTTCGCCCGGGTCTACGCCGTCGACCCCAGTGCCGGGCAGATCAAGAGCGCCACCCCCCACAAGCGG GTGGAGTACCGGGTGGCACCGGCGGAAGAAACCGGCCTCCCCGACGCCAGCGTCGACCTGGTGATCGCTGCCCAGGCCCT CCACTGGTTCGACTTCAGCCGCTTCTACGCCGAGGTGCGCCGGGTAGCCCGGGGAGGTGCTGTCTTTGCCGCCTTCACCT ATGGGCTCCTTGCCATCGATGATGAGATCGACCGGATCATAGGCCGCTTCTACCGCGACGTCATAGGCCCCTACTGGCCC CCCGAGCGGGCCCACGTGGACGCCGGCTACCGGACCCTCCCCTTCCCTTTTGCCGAGATCGAGACCCCAACCTTTGCCAT GAAGGCGGAATGGGACCTGGGGCACCTGATGGGCTACTTCGAGACATGGTCTGCGGTGAAGGAATACCGGCGGCTGAGGG GGGATGATCCGTTGGAGCTCGTGGCAGGGGACCTGGCAACAGCCTGGGGGGACCCGGCGCTTGTCAGGCAGGTCTCGTGG CCCCTGGTTCTCCGGGCGGGGAGGATAGAATAA
Upstream 100 bases:
>100_bases GATTTCAGGGTGGCCGGTATCGCCTGCGGTCCCCACCCGGTTTTCGAGACGAGTTGCGTCATCGACTTTGCCGGTTGGTT CACTGAGAGGTAAAACCACC
Downstream 100 bases:
>100_bases AAAAGTTTTAGTTCTCCCCCTTCTTCCGGAGAACCACCCGGCGCCCCTTGGCAATGCGCCGCTCCTTCCCCTTCCGTTCC TGCCGGGCAGCCACGTCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MAQQFKDYFSEKSDVYRSYRPGYPTELFAWLAGLPARRDAALDCGCGTGQASVALAEHFARVYAVDPSAGQIKSATPHKR VEYRVAPAEETGLPDASVDLVIAAQALHWFDFSRFYAEVRRVARGGAVFAAFTYGLLAIDDEIDRIIGRFYRDVIGPYWP PERAHVDAGYRTLPFPFAEIETPTFAMKAEWDLGHLMGYFETWSAVKEYRRLRGDDPLELVAGDLATAWGDPALVRQVSW PLVLRAGRIE
Sequences:
>Translated_250_residues MAQQFKDYFSEKSDVYRSYRPGYPTELFAWLAGLPARRDAALDCGCGTGQASVALAEHFARVYAVDPSAGQIKSATPHKR VEYRVAPAEETGLPDASVDLVIAAQALHWFDFSRFYAEVRRVARGGAVFAAFTYGLLAIDDEIDRIIGRFYRDVIGPYWP PERAHVDAGYRTLPFPFAEIETPTFAMKAEWDLGHLMGYFETWSAVKEYRRLRGDDPLELVAGDLATAWGDPALVRQVSW PLVLRAGRIE >Mature_249_residues AQQFKDYFSEKSDVYRSYRPGYPTELFAWLAGLPARRDAALDCGCGTGQASVALAEHFARVYAVDPSAGQIKSATPHKRV EYRVAPAEETGLPDASVDLVIAAQALHWFDFSRFYAEVRRVARGGAVFAAFTYGLLAIDDEIDRIIGRFYRDVIGPYWPP ERAHVDAGYRTLPFPFAEIETPTFAMKAEWDLGHLMGYFETWSAVKEYRRLRGDDPLELVAGDLATAWGDPALVRQVSWP LVLRAGRIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322003, Length=128, Percent_Identity=31.25, Blast_Score=76, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 28045; Mature: 27914
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQQFKDYFSEKSDVYRSYRPGYPTELFAWLAGLPARRDAALDCGCGTGQASVALAEHFA CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHH RVYAVDPSAGQIKSATPHKRVEYRVAPAEETGLPDASVDLVIAAQALHWFDFSRFYAEVR HHEEECCCCCCCCCCCCCCCEEEEECCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RVARGGAVFAAFTYGLLAIDDEIDRIIGRFYRDVIGPYWPPERAHVDAGYRTLPFPFAEI HHHCCCHHHHHHHHHHHHEHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCEECCCCHHHC ETPTFAMKAEWDLGHLMGYFETWSAVKEYRRLRGDDPLELVAGDLATAWGDPALVRQVSW CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHCC PLVLRAGRIE CCEEECCCCC >Mature Secondary Structure AQQFKDYFSEKSDVYRSYRPGYPTELFAWLAGLPARRDAALDCGCGTGQASVALAEHFA CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHHHH RVYAVDPSAGQIKSATPHKRVEYRVAPAEETGLPDASVDLVIAAQALHWFDFSRFYAEVR HHEEECCCCCCCCCCCCCCCEEEEECCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RVARGGAVFAAFTYGLLAIDDEIDRIIGRFYRDVIGPYWPPERAHVDAGYRTLPFPFAEI HHHCCCHHHHHHHHHHHHEHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCEECCCCHHHC ETPTFAMKAEWDLGHLMGYFETWSAVKEYRRLRGDDPLELVAGDLATAWGDPALVRQVSW CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHCC PLVLRAGRIE CCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]