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The map label for this gene is yrbE [C]

Identifier: 78222008

GI number: 78222008

Start: 868982

End: 869755

Strand: Reverse

Name: yrbE [C]

Synonym: Gmet_0788

Alternate gene names: 78222008

Gene position: 869755-868982 (Counterclockwise)

Preceding gene: 78222009

Following gene: 78222007

Centisome position: 21.76

GC content: 62.02

Gene sequence:

>774_bases
GTGCTCCGCACCTTCCTCGAAAAACTGGGCGCCGTCACCATCTTCATCTTCCGGGAAATGGGCCGGATGCTGATCTTTCT
CGTCATGGCCCTCGTGAACATCATCATCCGGCCCGGCAGGCCCTTCCATATTTTCAAACAGATCCACTTCATCGGCACCA
AATCCCTCTTCGTCATAACCCTCACCGCCTCGTTCACCGGTATGGTCCTGGGGCTCCAGGGGTACTACACCCTGGCCAAG
TTCGGCTCCGAGGGGATGCTCGGCTCGGCGGTGGCCCTCTCCCTCATCCGCGAGTTGGGGCCGGTCCTCACGGCCCTCAT
GGTGGTGGGGCGTGCCGGCAGCGCCATAACCGCCGAAATCGGGATCATGAAGATAACCGAACAGATCGACGCGATGAAGA
CCATGGCGCTGGAACCGTTCAAGTACCTGATCTCGCCGAAGATCGTCGGGGCGCTGGTGGCCGTGCCGCTTCTGTGCGCC
ATCTTCGACGTGGTCGGCATCTACGGCGGGTACCTGGTGGGGGTCAAACTCCTGGGGGTTAACCCCGGCGCCTATTTCCA
CGAGATGGAGCGGAGCGTGGAGTGGAAGGACGTCTGGTCCGGGTTCGTCAAATCCATCTCCTTCGGCGGCATCCTCGCCT
GGGTCTGCTGCTACAAGGGATACCACGCCAGCCACGGCGCCGAGGGGGTGTCGCGGGCCACCACCGAGGCGGTGGTCATG
TCGTCGGTCTTGGTGCTGGTGTGGGACTACTTCCTCACGTCGGTGATGCTGTAA

Upstream 100 bases:

>100_bases
AACTTCCTCTCCACGGACTTCATCCTCTGAGTGTGGCTTTACTTCGGCGACTCTTCGTCATATACTCTGTCGCACCTATC
AATTTTATCGGGAGAGAACC

Downstream 100 bases:

>100_bases
TTTATGATCAAACTCGTTGACATCCACAAGTCATTCGACTCCCAGACAGTGCTGGACGGCCTTTCCCTGGAAATACCCGA
GGGGAAGATCACGGCGGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MLRTFLEKLGAVTIFIFREMGRMLIFLVMALVNIIIRPGRPFHIFKQIHFIGTKSLFVITLTASFTGMVLGLQGYYTLAK
FGSEGMLGSAVALSLIRELGPVLTALMVVGRAGSAITAEIGIMKITEQIDAMKTMALEPFKYLISPKIVGALVAVPLLCA
IFDVVGIYGGYLVGVKLLGVNPGAYFHEMERSVEWKDVWSGFVKSISFGGILAWVCCYKGYHASHGAEGVSRATTEAVVM
SSVLVLVWDYFLTSVML

Sequences:

>Translated_257_residues
MLRTFLEKLGAVTIFIFREMGRMLIFLVMALVNIIIRPGRPFHIFKQIHFIGTKSLFVITLTASFTGMVLGLQGYYTLAK
FGSEGMLGSAVALSLIRELGPVLTALMVVGRAGSAITAEIGIMKITEQIDAMKTMALEPFKYLISPKIVGALVAVPLLCA
IFDVVGIYGGYLVGVKLLGVNPGAYFHEMERSVEWKDVWSGFVKSISFGGILAWVCCYKGYHASHGAEGVSRATTEAVVM
SSVLVLVWDYFLTSVML
>Mature_257_residues
MLRTFLEKLGAVTIFIFREMGRMLIFLVMALVNIIIRPGRPFHIFKQIHFIGTKSLFVITLTASFTGMVLGLQGYYTLAK
FGSEGMLGSAVALSLIRELGPVLTALMVVGRAGSAITAEIGIMKITEQIDAMKTMALEPFKYLISPKIVGALVAVPLLCA
IFDVVGIYGGYLVGVKLLGVNPGAYFHEMERSVEWKDVWSGFVKSISFGGILAWVCCYKGYHASHGAEGVSRATTEAVVM
SSVLVLVWDYFLTSVML

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=260, Percent_Identity=42.6923076923077, Blast_Score=199, Evalue=2e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 28035; Mature: 28035

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRTFLEKLGAVTIFIFREMGRMLIFLVMALVNIIIRPGRPFHIFKQIHFIGTKSLFVIT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEE
LTASFTGMVLGLQGYYTLAKFGSEGMLGSAVALSLIRELGPVLTALMVVGRAGSAITAEI
EECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
GIMKITEQIDAMKTMALEPFKYLISPKIVGALVAVPLLCAIFDVVGIYGGYLVGVKLLGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC
NPGAYFHEMERSVEWKDVWSGFVKSISFGGILAWVCCYKGYHASHGAEGVSRATTEAVVM
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
SSVLVLVWDYFLTSVML
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLRTFLEKLGAVTIFIFREMGRMLIFLVMALVNIIIRPGRPFHIFKQIHFIGTKSLFVIT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEE
LTASFTGMVLGLQGYYTLAKFGSEGMLGSAVALSLIRELGPVLTALMVVGRAGSAITAEI
EECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
GIMKITEQIDAMKTMALEPFKYLISPKIVGALVAVPLLCAIFDVVGIYGGYLVGVKLLGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEC
NPGAYFHEMERSVEWKDVWSGFVKSISFGGILAWVCCYKGYHASHGAEGVSRATTEAVVM
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
SSVLVLVWDYFLTSVML
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA