| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78222001
Identifier: 78222001
GI number: 78222001
Start: 861062
End: 861907
Strand: Direct
Name: 78222001
Synonym: Gmet_0781
Alternate gene names: NA
Gene position: 861062-861907 (Clockwise)
Preceding gene: 78221995
Following gene: 78222002
Centisome position: 21.54
GC content: 60.76
Gene sequence:
>846_bases ATGAGGCATTCGATTGGTCCAGCGTTGTCACTGGTTGCCGCATTGATGTTTTTTGCGCTGCTGACGGGGCCGTGCCGAGT GGAAGCCGCCGGGGCCGAAACCATCCGGGTGAATGGTTCCGGCAGTGCCCTGTACGTAATGAGGCCGCTGATCAAGGCGT ATCTCAAGGCCCACCCCGGAGTCCGCATCGAAATGGAAAAGCCCCTGGGGAGTTCCGGGGCCGTAAAGGCCCTTCTTGCA GGGGGGCTGGATATGGTTGTCAGCAGCAAGGTGCTCAAGTCGGAAGAGGCGGCGCAGGGAGGCATTTCCCGGGAATACGG CAAAATGCCTCTGGTCGTCGTGACAGGGAAGCAGGTATCCAAAAGGGATATCACCACGAAGGAACTGGAGGATATCTATT CCGGAAAGGTGAGAACCTGGCCCAATGGCGAGCCGATCCGGCTGGTGCTGCGGCCCGATGCCGATATCGACACCACGATC CTTGCGGGGCTCTCCCCTGCCATGGGCAAGGCGATGAAGGCGGCCCACTCCCATCCCGGCATGATTGTCGCGGTGACGGA TCCCGAATCCGATGAAGCGGTCGCAAAGACTCCCGGCTCCCTGGGTACCGCCGCCCTGTCGTCGATCCTGGTGGAGAAGG CCCCTCTGAATGTTCTCGCCCTGAACGGAATCAAGCCCTCCGTGAAGACCCTGGCCAACGGGACGTATCCCCTTGCCAAG GATATCCGCTTCATCACCACGAAGCATACTCCGCCCGCCACCCTCAAATTCATCGATTTCATCTACTCGCCTCAGGGCCG GGCCATCGCCGGTAAGGCAGGGGTTCTCGTTCCCGTGGGGCGGTAA
Upstream 100 bases:
>100_bases GCATGTTTTGTCGCTTTGGCCATGGCATTGCCATGGATACGCTGTAATCGTCATGACCGACAGAGTGGCTATACCGCAAT CAGCCTGAGGAGGGTCTTTG
Downstream 100 bases:
>100_bases AAAGGGCCTGTGACAACACTCTACAGATCCATAGCCCGTCTCACCACTCTCTTTGCGGGGGCCATAACCATTACCGTGGC GGTTCTGGTCCCTGCCGGCT
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MRHSIGPALSLVAALMFFALLTGPCRVEAAGAETIRVNGSGSALYVMRPLIKAYLKAHPGVRIEMEKPLGSSGAVKALLA GGLDMVVSSKVLKSEEAAQGGISREYGKMPLVVVTGKQVSKRDITTKELEDIYSGKVRTWPNGEPIRLVLRPDADIDTTI LAGLSPAMGKAMKAAHSHPGMIVAVTDPESDEAVAKTPGSLGTAALSSILVEKAPLNVLALNGIKPSVKTLANGTYPLAK DIRFITTKHTPPATLKFIDFIYSPQGRAIAGKAGVLVPVGR
Sequences:
>Translated_281_residues MRHSIGPALSLVAALMFFALLTGPCRVEAAGAETIRVNGSGSALYVMRPLIKAYLKAHPGVRIEMEKPLGSSGAVKALLA GGLDMVVSSKVLKSEEAAQGGISREYGKMPLVVVTGKQVSKRDITTKELEDIYSGKVRTWPNGEPIRLVLRPDADIDTTI LAGLSPAMGKAMKAAHSHPGMIVAVTDPESDEAVAKTPGSLGTAALSSILVEKAPLNVLALNGIKPSVKTLANGTYPLAK DIRFITTKHTPPATLKFIDFIYSPQGRAIAGKAGVLVPVGR >Mature_281_residues MRHSIGPALSLVAALMFFALLTGPCRVEAAGAETIRVNGSGSALYVMRPLIKAYLKAHPGVRIEMEKPLGSSGAVKALLA GGLDMVVSSKVLKSEEAAQGGISREYGKMPLVVVTGKQVSKRDITTKELEDIYSGKVRTWPNGEPIRLVLRPDADIDTTI LAGLSPAMGKAMKAAHSHPGMIVAVTDPESDEAVAKTPGSLGTAALSSILVEKAPLNVLALNGIKPSVKTLANGTYPLAK DIRFITTKHTPPATLKFIDFIYSPQGRAIAGKAGVLVPVGR
Specific function: Unknown
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29453; Mature: 29453
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHSIGPALSLVAALMFFALLTGPCRVEAAGAETIRVNGSGSALYVMRPLIKAYLKAHPG CCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCEEHHHHHHHHHHHHCCCC VRIEMEKPLGSSGAVKALLAGGLDMVVSSKVLKSEEAAQGGISREYGKMPLVVVTGKQVS EEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEEEECCCCC KRDITTKELEDIYSGKVRTWPNGEPIRLVLRPDADIDTTILAGLSPAMGKAMKAAHSHPG CCCCCHHHHHHHHCCCEEECCCCCCEEEEECCCCCCCHHHHHCCCHHHHHHHHHHCCCCC MIVAVTDPESDEAVAKTPGSLGTAALSSILVEKAPLNVLALNGIKPSVKTLANGTYPLAK EEEEEECCCCCCHHHCCCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHCCCCCCHHH DIRFITTKHTPPATLKFIDFIYSPQGRAIAGKAGVLVPVGR CEEEEEECCCCCHHHHHHHHHCCCCCCEEECCCCEEEECCC >Mature Secondary Structure MRHSIGPALSLVAALMFFALLTGPCRVEAAGAETIRVNGSGSALYVMRPLIKAYLKAHPG CCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCCCEEHHHHHHHHHHHHCCCC VRIEMEKPLGSSGAVKALLAGGLDMVVSSKVLKSEEAAQGGISREYGKMPLVVVTGKQVS EEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEEEECCCCC KRDITTKELEDIYSGKVRTWPNGEPIRLVLRPDADIDTTILAGLSPAMGKAMKAAHSHPG CCCCCHHHHHHHHCCCEEECCCCCCEEEEECCCCCCCHHHHHCCCHHHHHHHHHHCCCCC MIVAVTDPESDEAVAKTPGSLGTAALSSILVEKAPLNVLALNGIKPSVKTLANGTYPLAK EEEEEECCCCCCHHHCCCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHCCCCCCHHH DIRFITTKHTPPATLKFIDFIYSPQGRAIAGKAGVLVPVGR CEEEEEECCCCCHHHHHHHHHCCCCCCEEECCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA