| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is yvdA [H]
Identifier: 78221994
GI number: 78221994
Start: 850145
End: 850690
Strand: Reverse
Name: yvdA [H]
Synonym: Gmet_0774
Alternate gene names: 78221994
Gene position: 850690-850145 (Counterclockwise)
Preceding gene: 78221996
Following gene: 304570568
Centisome position: 21.28
GC content: 62.82
Gene sequence:
>546_bases ATGACCCTTCTCGACACGATCCTCGACGCCAACAGGGAGTTCGTCCGCCCCGGGGTATTCCCTCCCCTTCCCAAGAACCC GAGGAAGCAGTTCGCCATCTTCACCTGCATGGATACCCGGCTCGTGGACTTTCTGGAACCGGCCATGGGAATCAAGCGCG GTGATGCTAAGGTCATCAAGAACGCCGGCAACACCATCGTCGACCCCATGAGCGGCGGCGTGGTGAGGAGCCTCGTGGCG GCCATTTTCATGCTCGGCGTGGAGGAAATCTTCGTAATCGGGCACCAGGACTGCGGCATGGCCAGCGTCGATGCCAAGGC CCTGAAAGAGCGGATGATTGCGCGGGGCGTGGATCCTGCGATCATCGAAGCCCAGGTGCCAGACCTGGCCCAGTGGATGG GGGCCTTCTCCTGCCCCGAGGAGAACGTCGGGCGGGTGGTTTCCGTTCTCCGCCAGAACCCTCTCATCCCCCGGGACGTG CCGATCCACGGCCTCATCTTCTGCCCCAACGACGGTCACCTGGACGTGGTAGTGAGGGGCTACTGA
Upstream 100 bases:
>100_bases TGCAAATGCGCGAAGCTCGTCATGAAAACGGTTGACAGGTCGCACCACGGCCGGGTTATATAGATGCACGCTCAAACCAT GCGAAAACGCGAGGTGCCCG
Downstream 100 bases:
>100_bases GCCCCGTGAGGAGCGACATGACCCACGACTCCCTCTTCAGCACCGCCGAACTGGAAACGGTTCCCCTTTTCCGCTTCGTC CCCCTGGAGTGCATCGAGGG
Product: carbonic anhydrase
Products: NA
Alternate protein names: Carbonate dehydratase [H]
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MTLLDTILDANREFVRPGVFPPLPKNPRKQFAIFTCMDTRLVDFLEPAMGIKRGDAKVIKNAGNTIVDPMSGGVVRSLVA AIFMLGVEEIFVIGHQDCGMASVDAKALKERMIARGVDPAIIEAQVPDLAQWMGAFSCPEENVGRVVSVLRQNPLIPRDV PIHGLIFCPNDGHLDVVVRGY
Sequences:
>Translated_181_residues MTLLDTILDANREFVRPGVFPPLPKNPRKQFAIFTCMDTRLVDFLEPAMGIKRGDAKVIKNAGNTIVDPMSGGVVRSLVA AIFMLGVEEIFVIGHQDCGMASVDAKALKERMIARGVDPAIIEAQVPDLAQWMGAFSCPEENVGRVVSVLRQNPLIPRDV PIHGLIFCPNDGHLDVVVRGY >Mature_180_residues TLLDTILDANREFVRPGVFPPLPKNPRKQFAIFTCMDTRLVDFLEPAMGIKRGDAKVIKNAGNTIVDPMSGGVVRSLVAA IFMLGVEEIFVIGHQDCGMASVDAKALKERMIARGVDPAIIEAQVPDLAQWMGAFSCPEENVGRVVSVLRQNPLIPRDVP IHGLIFCPNDGHLDVVVRGY
Specific function: Reversible hydration of carbon dioxide [H]
COG id: COG0288
COG function: function code P; Carbonic anhydrase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the beta-class carbonic anhydrase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001765 [H]
Pfam domain/function: PF00484 Pro_CA [H]
EC number: =4.2.1.1 [H]
Molecular weight: Translated: 19778; Mature: 19647
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLDTILDANREFVRPGVFPPLPKNPRKQFAIFTCMDTRLVDFLEPAMGIKRGDAKVIK CCHHHHHHHCCHHHCCCCCCCCCCCCCCHHEEEEEEHHHHHHHHHHHHHCCCCCCHHHHH NAGNTIVDPMSGGVVRSLVAAIFMLGVEEIFVIGHQDCGMASVDAKALKERMIARGVDPA CCCCEEECCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHCCCCCC IIEAQVPDLAQWMGAFSCPEENVGRVVSVLRQNPLIPRDVPIHGLIFCPNDGHLDVVVRG EEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEEC Y C >Mature Secondary Structure TLLDTILDANREFVRPGVFPPLPKNPRKQFAIFTCMDTRLVDFLEPAMGIKRGDAKVIK CHHHHHHHCCHHHCCCCCCCCCCCCCCHHEEEEEEHHHHHHHHHHHHHCCCCCCHHHHH NAGNTIVDPMSGGVVRSLVAAIFMLGVEEIFVIGHQDCGMASVDAKALKERMIARGVDPA CCCCEEECCCCCHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHCCCCCC IIEAQVPDLAQWMGAFSCPEENVGRVVSVLRQNPLIPRDVPIHGLIFCPNDGHLDVVVRG EEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCEEEEEEC Y C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]