| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221984
Identifier: 78221984
GI number: 78221984
Start: 839242
End: 841086
Strand: Reverse
Name: 78221984
Synonym: Gmet_0764
Alternate gene names: NA
Gene position: 841086-839242 (Counterclockwise)
Preceding gene: 78221985
Following gene: 78221983
Centisome position: 21.04
GC content: 60.6
Gene sequence:
>1845_bases ATGAACAAAGACATCCGCCTCCACGGACATATCGACGATCGAATCGAGTATTACGCCATCGTGGCTGGCGAGGATGCCCA CCGGCGCTACTTCTTCAACGCCGCCGAGAGCAACGGGGCGCAGCTTCGCTTCTTCTCCCCCGGCAACGAGTTCGTCATCG GCCGCGGCGGCATACGACACGCAGGCAATGGCGGCTCATTCTGCGAGTACATGTTCGGCGTGGACCAGCCCATGGCTGAC CTGGCCAAGGGGGATGTCATCAACCGGCTCGTGGTCTACGGCGCCCGCTCCGGCGACGAGGGAGGGACGCTCCACTTCAG CGAACAGACCAGTGGGGAGTTGGGCTTCGACAAAATTTTCTTCGACGGCAACGCGGTGGCGAACTACTTCTTTTTCCTCG CCTCGGAACGCCTCGGCGCGAGCCTCCGCCAACAGCAGACAGCCATCGTCCGCGCCGTCGGCAAGGCCCTCAAGCGCTCT CCGACCGTGGGCGCCCATGACGAGAACACCCTCATCGACGAGGTGCTCGGGCTCCTGAACGACCCCGGCGCCCTCTTCTT TCTCTTCAAGCTGGTGAACATCCATCACCGGGAATATTACGACACCTTCCGCAGCCTCTACTTTGCCAGCAAGAAAATCT CCGACGAGGATTTCGCCGGGCTTTCGGACATTGCCGAGCGTCACAACATCGACCGCTACCAGCAGGAGCGGATCCGGATC GATGTCATGTACAAACATCCGGCCAATCGGCGGATCGTTGACGAATACAAGAACATCCTCATTGGCTGCCACCTCAAGGG GGAGATCAGCGCCCTGGAAAACGCCCGGCTCACCCGCCTTAAGACCCTGTCGGTGCGAAACAAGATTCCTGGTGCCCTCT TCTACGCCCTCGACGACATGCTGAAAAAAGACAAGAAGATCGGGGGGACCGAGGAGCACGAATCCATCGCCGAGACCCGC CAGATCCTCGAAGGGCTCTTCCTGCGGGAACGGGAGATCGAGAGCGCCATCGACCGGGAGGACATGGTGAGGCTTCTTTT CGCCAAAAAGCGCGCCTCCGAGGTCAGGGACCACACCTTCGAGGAGATTCTTCTGGACGCCAGCAAGGGGTGCGACGAGA GGATCCGCGACGGGGCGGACATGGCGCTCCTGGAGGGATTCTCCCACATCATCACCTATTTCGACCGGTTCGACGCCACG TCCCAGGCGGTGAACCAACTCGCGTTCATGGAAACCGTGCGCATCTCCGAGGAGATGATCCGGAGCCTCCTGGGAAACCG GAGCGCCTTCGAGGAGTTGCGGCCGGGGCTCTTCACCGAGATCTTCATTGACGGGATCCTGGAGAACAAGTATCTGGGCC GCTACGGACGGAGGAAGGTTACGGCGCTCGTGGCGGGGCTGCGGCTTATCGAGGAGAACCGACTCACCGTGGCGACGCTG CTGGACGAATTGCTGGCCATCGACCGCGAGGAGCGGCTCGCCATCGCCCTCCTGAACCATGTGCGGGACCGGATCAGGAA CTTCTACTCCAACTACGCCACCCGGGACGACCAGGCGACCATGAAACGCGAGGTGACCGAGGATCTGCGGAAACGGAAAA TCATAACCGGCTCCATCCCCTCACGGCTTTTTGACGAGACCATCGTTACCATCAAGAAGGAGGCGGTCTACCTCCATAAC CTCCTCCCCCAGATCATCGGCGAGAAGGACAGCGCCCTGCGGGAGGATTTCCTGGAGAACTCGGGCCTGGACCGCTTCTA CGTGGAGGAACTGGAGCGGGAATACTTCGAGCTGAACCGGCTCGACCTCGAACAACTCTACCAGATACGCAAAGGGCTCA GTTAA
Upstream 100 bases:
>100_bases GGGGATGAGTCGCGGCTCCCCGAAGGTGTTGAGTTTGCATACGACGGCATGGAGATTGCTTTGTAGACGGAGCTGACCAA ACAAGCGGCATAAGGTTCCC
Downstream 100 bases:
>100_bases GGCCGGGACCAAGGACCGGGGACCAGTAAAACCCACTTCCCAAAGCCGCGTTAGCCATGCTGCCACACCAGCCGCACCCA TGTGAACATGCGCTTCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 614; Mature: 614
Protein sequence:
>614_residues MNKDIRLHGHIDDRIEYYAIVAGEDAHRRYFFNAAESNGAQLRFFSPGNEFVIGRGGIRHAGNGGSFCEYMFGVDQPMAD LAKGDVINRLVVYGARSGDEGGTLHFSEQTSGELGFDKIFFDGNAVANYFFFLASERLGASLRQQQTAIVRAVGKALKRS PTVGAHDENTLIDEVLGLLNDPGALFFLFKLVNIHHREYYDTFRSLYFASKKISDEDFAGLSDIAERHNIDRYQQERIRI DVMYKHPANRRIVDEYKNILIGCHLKGEISALENARLTRLKTLSVRNKIPGALFYALDDMLKKDKKIGGTEEHESIAETR QILEGLFLREREIESAIDREDMVRLLFAKKRASEVRDHTFEEILLDASKGCDERIRDGADMALLEGFSHIITYFDRFDAT SQAVNQLAFMETVRISEEMIRSLLGNRSAFEELRPGLFTEIFIDGILENKYLGRYGRRKVTALVAGLRLIEENRLTVATL LDELLAIDREERLAIALLNHVRDRIRNFYSNYATRDDQATMKREVTEDLRKRKIITGSIPSRLFDETIVTIKKEAVYLHN LLPQIIGEKDSALREDFLENSGLDRFYVEELEREYFELNRLDLEQLYQIRKGLS
Sequences:
>Translated_614_residues MNKDIRLHGHIDDRIEYYAIVAGEDAHRRYFFNAAESNGAQLRFFSPGNEFVIGRGGIRHAGNGGSFCEYMFGVDQPMAD LAKGDVINRLVVYGARSGDEGGTLHFSEQTSGELGFDKIFFDGNAVANYFFFLASERLGASLRQQQTAIVRAVGKALKRS PTVGAHDENTLIDEVLGLLNDPGALFFLFKLVNIHHREYYDTFRSLYFASKKISDEDFAGLSDIAERHNIDRYQQERIRI DVMYKHPANRRIVDEYKNILIGCHLKGEISALENARLTRLKTLSVRNKIPGALFYALDDMLKKDKKIGGTEEHESIAETR QILEGLFLREREIESAIDREDMVRLLFAKKRASEVRDHTFEEILLDASKGCDERIRDGADMALLEGFSHIITYFDRFDAT SQAVNQLAFMETVRISEEMIRSLLGNRSAFEELRPGLFTEIFIDGILENKYLGRYGRRKVTALVAGLRLIEENRLTVATL LDELLAIDREERLAIALLNHVRDRIRNFYSNYATRDDQATMKREVTEDLRKRKIITGSIPSRLFDETIVTIKKEAVYLHN LLPQIIGEKDSALREDFLENSGLDRFYVEELEREYFELNRLDLEQLYQIRKGLS >Mature_614_residues MNKDIRLHGHIDDRIEYYAIVAGEDAHRRYFFNAAESNGAQLRFFSPGNEFVIGRGGIRHAGNGGSFCEYMFGVDQPMAD LAKGDVINRLVVYGARSGDEGGTLHFSEQTSGELGFDKIFFDGNAVANYFFFLASERLGASLRQQQTAIVRAVGKALKRS PTVGAHDENTLIDEVLGLLNDPGALFFLFKLVNIHHREYYDTFRSLYFASKKISDEDFAGLSDIAERHNIDRYQQERIRI DVMYKHPANRRIVDEYKNILIGCHLKGEISALENARLTRLKTLSVRNKIPGALFYALDDMLKKDKKIGGTEEHESIAETR QILEGLFLREREIESAIDREDMVRLLFAKKRASEVRDHTFEEILLDASKGCDERIRDGADMALLEGFSHIITYFDRFDAT SQAVNQLAFMETVRISEEMIRSLLGNRSAFEELRPGLFTEIFIDGILENKYLGRYGRRKVTALVAGLRLIEENRLTVATL LDELLAIDREERLAIALLNHVRDRIRNFYSNYATRDDQATMKREVTEDLRKRKIITGSIPSRLFDETIVTIKKEAVYLHN LLPQIIGEKDSALREDFLENSGLDRFYVEELEREYFELNRLDLEQLYQIRKGLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70449; Mature: 70449
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKDIRLHGHIDDRIEYYAIVAGEDAHRRYFFNAAESNGAQLRFFSPGNEFVIGRGGIRH CCCCEEEECCCCCCEEEEEEEECCCHHHHEEEECCCCCCCEEEEECCCCCEEEECCCCCC AGNGGSFCEYMFGVDQPMADLAKGDVINRLVVYGARSGDEGGTLHFSEQTSGELGFDKIF CCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCCCCCCEEEECCCCCCCCCCEEEE FDGNAVANYFFFLASERLGASLRQQQTAIVRAVGKALKRSPTVGAHDENTLIDEVLGLLN ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHC DPGALFFLFKLVNIHHREYYDTFRSLYFASKKISDEDFAGLSDIAERHNIDRYQQERIRI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHCCCHHHHHHHEEE DVMYKHPANRRIVDEYKNILIGCHLKGEISALENARLTRLKTLSVRNKIPGALFYALDDM EEEEECCCCCHHHHHHHCEEEEECCCCCHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHH LKKDKKIGGTEEHESIAETRQILEGLFLREREIESAIDREDMVRLLFAKKRASEVRDHTF HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH EEILLDASKGCDERIRDGADMALLEGFSHIITYFDRFDATSQAVNQLAFMETVRISEEMI HHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH RSLLGNRSAFEELRPGLFTEIFIDGILENKYLGRYGRRKVTALVAGLRLIEENRLTVATL HHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LDELLAIDREERLAIALLNHVRDRIRNFYSNYATRDDQATMKREVTEDLRKRKIITGSIP HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCH SRLFDETIVTIKKEAVYLHNLLPQIIGEKDSALREDFLENSGLDRFYVEELEREYFELNR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC LDLEQLYQIRKGLS CCHHHHHHHHHCCC >Mature Secondary Structure MNKDIRLHGHIDDRIEYYAIVAGEDAHRRYFFNAAESNGAQLRFFSPGNEFVIGRGGIRH CCCCEEEECCCCCCEEEEEEEECCCHHHHEEEECCCCCCCEEEEECCCCCEEEECCCCCC AGNGGSFCEYMFGVDQPMADLAKGDVINRLVVYGARSGDEGGTLHFSEQTSGELGFDKIF CCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHEECCCCCCCCEEEECCCCCCCCCCEEEE FDGNAVANYFFFLASERLGASLRQQQTAIVRAVGKALKRSPTVGAHDENTLIDEVLGLLN ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHC DPGALFFLFKLVNIHHREYYDTFRSLYFASKKISDEDFAGLSDIAERHNIDRYQQERIRI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHCCCHHHHHHHEEE DVMYKHPANRRIVDEYKNILIGCHLKGEISALENARLTRLKTLSVRNKIPGALFYALDDM EEEEECCCCCHHHHHHHCEEEEECCCCCHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHH LKKDKKIGGTEEHESIAETRQILEGLFLREREIESAIDREDMVRLLFAKKRASEVRDHTF HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH EEILLDASKGCDERIRDGADMALLEGFSHIITYFDRFDATSQAVNQLAFMETVRISEEMI HHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH RSLLGNRSAFEELRPGLFTEIFIDGILENKYLGRYGRRKVTALVAGLRLIEENRLTVATL HHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LDELLAIDREERLAIALLNHVRDRIRNFYSNYATRDDQATMKREVTEDLRKRKIITGSIP HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCH SRLFDETIVTIKKEAVYLHNLLPQIIGEKDSALREDFLENSGLDRFYVEELEREYFELNR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC LDLEQLYQIRKGLS CCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA