| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is 78221958
Identifier: 78221958
GI number: 78221958
Start: 812209
End: 813420
Strand: Reverse
Name: 78221958
Synonym: Gmet_0738
Alternate gene names: NA
Gene position: 813420-812209 (Counterclockwise)
Preceding gene: 304570567
Following gene: 78221952
Centisome position: 20.35
GC content: 60.73
Gene sequence:
>1212_bases ATGCATAACGACATCATCCAGACAGCCGTAGCCGAAACCATGGCCCGGATCAACGCATTCGTCCGGGTCCTGGAACAGGA CGAAATCCCGCTGATCCTCAACCGGCTCAAGGAAGAGGTCGATCATGAAATCGCCCTTACGGGGCAGATAGCGGGACGGC GGCGGGAACTCATGGCCCGGGTGAAGGGGGAAACCGACTACGGTGCGCTGCGGGAAATCCACGACGAATTGAATGGGCTG GAACTGGAACGGTTTCTCAAGATTCAGTCGGTGACCGCCCTCCACGCCTCATGCACGGAGTACCGGGATGTCCTGGCGGG ACGGGCGCTGGAACTGGTGGAGCAGGAAATGGCAGCCACCGGCAAAGGAAGCCCTCCGCGCTCCTACGCCCTCTGCAGCA TGGGGAGCGACGGCCGGGAGGAGCAGACCCTCATCACCGACCAGGACTACCTGATCGTCTACGGCGACGAAGGCGGCGAG GCGGCCGACCAGTGGTTCAGGGAATTCTCGGAGACTCTGGTGGAGCGCATGGCGGAGATGGGATTCAAGAAGTGCACCGG CGACATCATGCCGTCGAACCCCACCTGGCGGGGCTCCTACGGCCAATGGAAGAAAAAGCTCCTGGCCATCGTCCGCTACG AGTACGAGGATTACGCCAAAAACCTCATGGACCTCATCGTCCTCTCCGACGCCCGCCACGTGGCGGGGGACAAGGACCTG GCCAACGACCTGGTGGGACTCATCCGGGGACTGGAGCAGGACTACTTCCAGGTACTCTGGGGGATGGCCAAGGCGGCAAC GGAGATGAAGCTGGCCCTCGGCTTCCTGAACCGGCTCTGGACCGAAGGTTCAGGGGAGCACAAGGGAGAGTTCAACCTGA AGCTCCTCGCCTGGGCACCACTCGTCATGAACGTTCGGATTCTCGCCATCAACCAGGGGATACCGGCCACGAACACCGTG CGGCGAATCGAGCTGCTCCAGAAGGAGGGGAGCTTCTCGGCGACCTTTGCCCAGGGGCTCGTTGACGCTTACACCACCTT GACGAAGCACCGGATCCTCCTCCAGATCAAGGTCATCAAGGGAATCGACAAGAGCTCCTACTACCTGAACCCCTACACCC TCCCCGCCGACGAACGGGAGGAGATCCGCCAGGCTCTCATCAAAATCGAGGATCTCCAGCGCACCATTCATACGAATTTC TCAATCATGTAA
Upstream 100 bases:
>100_bases GGCCATCGACCACTAGAACGGCTTTTTAATTCGGTATAATTTGTGCTAGGATTAGGGGAAAGCGTTGCTTTCCCCTTTTT TATCCCGCGCGAGGATCTGC
Downstream 100 bases:
>100_bases CTTCTGTCACTGCGGCAGCACCGCTAAATGGACAGAAGCTGCCTCCAACTCCGCAGACCGAACTGGTGGGTCCCGCTCTC ATCTTGCTTAGGTTCAAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Nucleotidyltransferase; Signal-Transduction Protein; Signal Transduction Protein; Signal Transduction Protein With CBS Domains; Signal-Transduction Protein With CBS Domains; Nucleotidyltransferase Family; Signal Protein; CBS Domain Protein; Inosine-5-Monophosphate Dehydrogenase; DNA Polymerase III Subunit Epsilon; Endonuclease/Nucleotidyltransferase; Multidomain-Containing Protein; Nucleotidyltransferase Domain Family Protein; CBS Signal-Transduction Protein; Cyclic Nucleotide-Regulated Nucleotidyltransferase; Methyl-Accepting Chemotaxis Protein A; Nucleotidyltransferases
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MHNDIIQTAVAETMARINAFVRVLEQDEIPLILNRLKEEVDHEIALTGQIAGRRRELMARVKGETDYGALREIHDELNGL ELERFLKIQSVTALHASCTEYRDVLAGRALELVEQEMAATGKGSPPRSYALCSMGSDGREEQTLITDQDYLIVYGDEGGE AADQWFREFSETLVERMAEMGFKKCTGDIMPSNPTWRGSYGQWKKKLLAIVRYEYEDYAKNLMDLIVLSDARHVAGDKDL ANDLVGLIRGLEQDYFQVLWGMAKAATEMKLALGFLNRLWTEGSGEHKGEFNLKLLAWAPLVMNVRILAINQGIPATNTV RRIELLQKEGSFSATFAQGLVDAYTTLTKHRILLQIKVIKGIDKSSYYLNPYTLPADEREEIRQALIKIEDLQRTIHTNF SIM
Sequences:
>Translated_403_residues MHNDIIQTAVAETMARINAFVRVLEQDEIPLILNRLKEEVDHEIALTGQIAGRRRELMARVKGETDYGALREIHDELNGL ELERFLKIQSVTALHASCTEYRDVLAGRALELVEQEMAATGKGSPPRSYALCSMGSDGREEQTLITDQDYLIVYGDEGGE AADQWFREFSETLVERMAEMGFKKCTGDIMPSNPTWRGSYGQWKKKLLAIVRYEYEDYAKNLMDLIVLSDARHVAGDKDL ANDLVGLIRGLEQDYFQVLWGMAKAATEMKLALGFLNRLWTEGSGEHKGEFNLKLLAWAPLVMNVRILAINQGIPATNTV RRIELLQKEGSFSATFAQGLVDAYTTLTKHRILLQIKVIKGIDKSSYYLNPYTLPADEREEIRQALIKIEDLQRTIHTNF SIM >Mature_403_residues MHNDIIQTAVAETMARINAFVRVLEQDEIPLILNRLKEEVDHEIALTGQIAGRRRELMARVKGETDYGALREIHDELNGL ELERFLKIQSVTALHASCTEYRDVLAGRALELVEQEMAATGKGSPPRSYALCSMGSDGREEQTLITDQDYLIVYGDEGGE AADQWFREFSETLVERMAEMGFKKCTGDIMPSNPTWRGSYGQWKKKLLAIVRYEYEDYAKNLMDLIVLSDARHVAGDKDL ANDLVGLIRGLEQDYFQVLWGMAKAATEMKLALGFLNRLWTEGSGEHKGEFNLKLLAWAPLVMNVRILAINQGIPATNTV RRIELLQKEGSFSATFAQGLVDAYTTLTKHRILLQIKVIKGIDKSSYYLNPYTLPADEREEIRQALIKIEDLQRTIHTNF SIM
Specific function: Unknown
COG id: COG2905
COG function: function code T; Predicted signal-transduction protein containing cAMP-binding and CBS domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45649; Mature: 45649
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHNDIIQTAVAETMARINAFVRVLEQDEIPLILNRLKEEVDHEIALTGQIAGRRRELMAR CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHH VKGETDYGALREIHDELNGLELERFLKIQSVTALHASCTEYRDVLAGRALELVEQEMAAT HCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GKGSPPRSYALCSMGSDGREEQTLITDQDYLIVYGDEGGEAADQWFREFSETLVERMAEM CCCCCCCCEEEEECCCCCCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHC GFKKCTGDIMPSNPTWRGSYGQWKKKLLAIVRYEYEDYAKNLMDLIVLSDARHVAGDKDL CHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHH ANDLVGLIRGLEQDYFQVLWGMAKAATEMKLALGFLNRLWTEGSGEHKGEFNLKLLAWAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECH LVMNVRILAINQGIPATNTVRRIELLQKEGSFSATFAQGLVDAYTTLTKHRILLQIKVIK HHHCEEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEHH GIDKSSYYLNPYTLPADEREEIRQALIKIEDLQRTIHTNFSIM CCCCCCEEECCEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MHNDIIQTAVAETMARINAFVRVLEQDEIPLILNRLKEEVDHEIALTGQIAGRRRELMAR CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHH VKGETDYGALREIHDELNGLELERFLKIQSVTALHASCTEYRDVLAGRALELVEQEMAAT HCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GKGSPPRSYALCSMGSDGREEQTLITDQDYLIVYGDEGGEAADQWFREFSETLVERMAEM CCCCCCCCEEEEECCCCCCCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHC GFKKCTGDIMPSNPTWRGSYGQWKKKLLAIVRYEYEDYAKNLMDLIVLSDARHVAGDKDL CHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHH ANDLVGLIRGLEQDYFQVLWGMAKAATEMKLALGFLNRLWTEGSGEHKGEFNLKLLAWAP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECH LVMNVRILAINQGIPATNTVRRIELLQKEGSFSATFAQGLVDAYTTLTKHRILLQIKVIK HHHCEEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEHH GIDKSSYYLNPYTLPADEREEIRQALIKIEDLQRTIHTNFSIM CCCCCCEEECCEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA