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The map label for this gene is nudC [H]

Identifier: 78221934

GI number: 78221934

Start: 786612

End: 787508

Strand: Direct

Name: nudC [H]

Synonym: Gmet_0714

Alternate gene names: 78221934

Gene position: 786612-787508 (Clockwise)

Preceding gene: 78221932

Following gene: 78221935

Centisome position: 19.68

GC content: 68.12

Gene sequence:

>897_bases
ATGCCCTATCCCGACACGGCCAATCTCCCCTTTAACGCGACGGTCATCGCTGACGGTTTCACTCCCGAACCTCCCGATTC
GGGGGGAGGTGCCGGGCCGGGCGTCTGGGCCGTTCTCCGCGGAAACTCACTTGTGGTGGAAGAGCGGAGGGGAACCCTCG
CGCTTCCCGAGGGTGAGCGGCCGCAATGGCTTTCCGCCGGGCGGGAGACAATCACTATCGGCCGCTGGCACGGTCGTCCC
CTCAGGGTCGCCCGGATGTCGGCGCAGGACCCGCTTCCCTCCCCGTTCGTGGCCGAACCCTTCAACGCAACGGGTGAGCG
TCTTGATGACGCGACTCTCACCATCGGCGGCATGGCCCAGCAGATCCTCCATTGGGAACGCGACAGCCGCTTCTGCGCCC
GCTGCGGCGCTCCCCAGGAGCGCTTGCCGGGCACCTGGGGCAAGCGCTGCCCTCCATGCGGCGTCGAGCATTTTCCCCAC
ATCCACCCCTGCGCCATCGTCCTCGTGAAGCGGGGGGACGAGTTCCTCCTCACACGCAAGCCCGACTGGGCTCCGGGGCG
CTACGGGCTCGTGGCGGGATTTCTCGATTTCGGCGAATCCCTGGAGGAGTGCGCCCGTCGCGAGGTGCGGGAGGAAACCG
GGCTGGAGATCGGCGCCATCCGCTACGTGGGGAGCCAGTGCTGGCCCTTTCCGAGCCAGCTCATGGCGGGGTTCGTGGCC
GAGTACGCCGGGGGCGAGATATGCGTCGACCATGCCGAGTTGGAGGATGCCCGCTGGTTCAGCCCTGACGCCATGCCGGA
GTCGATCCCCCCCCGGCGGAGCATCGCCCGGTGGATCATCGATCGCTTCGCGATCGGGGACCGGGGACCGGGGACCAGGG
GCCGGGAAAACCCATAA

Upstream 100 bases:

>100_bases
AACAGGGATTTTTTCACGCCGGGCCGGTGAAATGGTTATCGGTTGTTGCGTCGCCGCACGCCGGCAGGTATCCTTGAGCG
AGTTCACCGGAGGTCTTCCC

Downstream 100 bases:

>100_bases
TACCATTCAGATTAAGGAGGATTGCCGTGTCATTTTTTTCAGTTCTCTGCCGTTTGGCCGTCGCCCTCTGGGTGGGAGGC
GCCGCCCTGTTCACCTTCGT

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MPYPDTANLPFNATVIADGFTPEPPDSGGGAGPGVWAVLRGNSLVVEERRGTLALPEGERPQWLSAGRETITIGRWHGRP
LRVARMSAQDPLPSPFVAEPFNATGERLDDATLTIGGMAQQILHWERDSRFCARCGAPQERLPGTWGKRCPPCGVEHFPH
IHPCAIVLVKRGDEFLLTRKPDWAPGRYGLVAGFLDFGESLEECARREVREETGLEIGAIRYVGSQCWPFPSQLMAGFVA
EYAGGEICVDHAELEDARWFSPDAMPESIPPRRSIARWIIDRFAIGDRGPGTRGRENP

Sequences:

>Translated_298_residues
MPYPDTANLPFNATVIADGFTPEPPDSGGGAGPGVWAVLRGNSLVVEERRGTLALPEGERPQWLSAGRETITIGRWHGRP
LRVARMSAQDPLPSPFVAEPFNATGERLDDATLTIGGMAQQILHWERDSRFCARCGAPQERLPGTWGKRCPPCGVEHFPH
IHPCAIVLVKRGDEFLLTRKPDWAPGRYGLVAGFLDFGESLEECARREVREETGLEIGAIRYVGSQCWPFPSQLMAGFVA
EYAGGEICVDHAELEDARWFSPDAMPESIPPRRSIARWIIDRFAIGDRGPGTRGRENP
>Mature_297_residues
PYPDTANLPFNATVIADGFTPEPPDSGGGAGPGVWAVLRGNSLVVEERRGTLALPEGERPQWLSAGRETITIGRWHGRPL
RVARMSAQDPLPSPFVAEPFNATGERLDDATLTIGGMAQQILHWERDSRFCARCGAPQERLPGTWGKRCPPCGVEHFPHI
HPCAIVLVKRGDEFLLTRKPDWAPGRYGLVAGFLDFGESLEECARREVREETGLEIGAIRYVGSQCWPFPSQLMAGFVAE
YAGGEICVDHAELEDARWFSPDAMPESIPPRRSIARWIIDRFAIGDRGPGTRGRENP

Specific function: Unknown

COG id: COG2816

COG function: function code L; NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI50593112, Length=166, Percent_Identity=40.3614457831325, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI13899267, Length=196, Percent_Identity=32.6530612244898, Blast_Score=109, Evalue=4e-24,
Organism=Escherichia coli, GI48994995, Length=227, Percent_Identity=33.4801762114537, Blast_Score=142, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI71986510, Length=174, Percent_Identity=34.4827586206897, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI212645999, Length=174, Percent_Identity=34.4827586206897, Blast_Score=89, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015375
- InterPro:   IPR022925
- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR015376 [H]

Pfam domain/function: PF00293 NUDIX; PF09296 NUDIX-like; PF09297 zf-NADH-PPase [H]

EC number: =3.6.1.22 [H]

Molecular weight: Translated: 32819; Mature: 32688

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYPDTANLPFNATVIADGFTPEPPDSGGGAGPGVWAVLRGNSLVVEERRGTLALPEGER
CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCEEECCCCCC
PQWLSAGRETITIGRWHGRPLRVARMSAQDPLPSPFVAEPFNATGERLDDATLTIGGMAQ
CHHHHCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHH
QILHWERDSRFCARCGAPQERLPGTWGKRCPPCGVEHFPHIHPCAIVLVKRGDEFLLTRK
HHHHHHHCCHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEECC
PDWAPGRYGLVAGFLDFGESLEECARREVREETGLEIGAIRYVGSQCWPFPSQLMAGFVA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHH
EYAGGEICVDHAELEDARWFSPDAMPESIPPRRSIARWIIDRFAIGDRGPGTRGRENP
HHCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
PYPDTANLPFNATVIADGFTPEPPDSGGGAGPGVWAVLRGNSLVVEERRGTLALPEGER
CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCEEECCCCCC
PQWLSAGRETITIGRWHGRPLRVARMSAQDPLPSPFVAEPFNATGERLDDATLTIGGMAQ
CHHHHCCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHH
QILHWERDSRFCARCGAPQERLPGTWGKRCPPCGVEHFPHIHPCAIVLVKRGDEFLLTRK
HHHHHHHCCHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEECC
PDWAPGRYGLVAGFLDFGESLEECARREVREETGLEIGAIRYVGSQCWPFPSQLMAGFVA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHH
EYAGGEICVDHAELEDARWFSPDAMPESIPPRRSIARWIIDRFAIGDRGPGTRGRENP
HHCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA