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The map label for this gene is bphB [H]

Identifier: 78221933

GI number: 78221933

Start: 784493

End: 786412

Strand: Reverse

Name: bphB [H]

Synonym: Gmet_0713

Alternate gene names: 78221933

Gene position: 786412-784493 (Counterclockwise)

Preceding gene: 78221944

Following gene: 78221931

Centisome position: 19.67

GC content: 60.1

Gene sequence:

>1920_bases
ATGACCGAGAAGACAACCGTCCCGTGGCCCAGTGCCGCAATGGCGGCGGCAATCCTCGCCGGACTCTGGATCGCGAGTCG
CGGCAACTATCTCCTCTTCCACACGGTGACTGAGATGTTCTCGGTGCTGGTGTCGGGGGGAATTTTCGTCATCGCCTGGA
ATGCCCGCCGTTTCCCCACCAGCCCCTATCTCCTGTTCATCGGCATAGCCCATATCTGCGTGGGAGGGGTCGACCTCCTC
CACGCGATGGCATACAAGGGGATGGGGGTATTCCCCGGCAATGGCCCCAACCTTCCCACCCAGCTCTGGATCGCTGCCCG
CTACATCCAAAGCATCTCGCTTTTCATGGCCCCTCTTTTCATCGGACGCACATTTCGTCCCGGGGCCACGCTGGCAGCCT
ATCTGGCTGTGACGGCGACCTTGATTGCCGCAATTTTCGGAGGAATCTTCCCCCCGTGCTTTGCGGAAGGAACCGGGCTC
ACCCCCTTCAAGATCGGGAGCGAGTACTTCATTTCGGTAATATTTCTGGCCGCCCTTGCCTTCCTGAGAAGGAAGCGGGA
GTTCTTTGACCGGCGCATCGTGAACATTCTCTCCGCCGCCATCGTGCTCATGGCCATGGCCGAACTGGCCTTCACCATTT
ACGAGGACGTCTATGGCCTCAGCAACCTGGTGGGACATCTCCTCAAGGTTGCGGCGGTTTTCCTGATCTACAAGGGGACG
GTGGAGACCAGCCTGACGCGCCCCTATGACCTCCTGTTCCGGGAGTTGAAGGAGAGCGAGGAAAAATTCGCCAAGGCGTT
CCATACCGCCCCGACCATCATGGTTATTACCTCTCTTGCCGAGGGGAGGTACCTGGAGGTGAACGAGGCCTTCGAGAATA
CGCTGGGGTGGCGGCGCGAGGAGGTGCTTGGCCGCGCTTCCCGGGAAATGGGCATCTGGGTCGATCAGGAACAACGGGAC
GAGATCATGGGGACCTTGGAGAGGGGGGAGAAGGTACTCAATCGGGACGTCACCCTCCGCAAAAAACAAGGAGGAACCAT
CGAAGGACTCTATTCGGCGGTGGGGATCGAGCTTGACAACAGAAAGTGCCTCCTGGGGATCGTGCGGGACGTTACCGCAC
GGAGGCGGGCCGAACGCGAGGTGAAACTCCTCAACGCCGAATTGACACAACGGGCCCAAATGCTGGAGGACACCAACGGC
GAACTGGAAGTGACGGTGGAACAGCTGGAAGCGGTCAACCAGGAACTGGAAGCTGCCAACAAAGAGTTGGAGGCCTTCAG
CTACACGGTGTCCCACGACCTGAGGAGCCCCCTCACCAACATCAACGGCGCCGCCCAGGTCATTCAGGAGCTGTTCGGCC
AGGAGTTGGACCCGCAATGCGGGAGACTCGTCGATATCATCCACCGGGAGACGCTCCGCATGAACCGGCTCATCGACACG
CTGCTCAGATTCGCCCACATCTCCCGGGGCGAGATCTCCCCCGAGACGGTCGACCTGAGCGCATTGGCGAAGGAGGTGGC
CGGGGAGCTTCAGGCACGGCATCCCCAACGGCAGGTGTCATTCGCCATTGCCGGCAACCTGACAACCCACGGCGACCCAC
GGCTGATGAAAATCATCCTCGACAATCTCTTCGGCAACGCCTGGAAGTACACCGGCACACAGGAAGCGGCCCACATCGAA
TTCGGTACGATTCTGCAGGACGGCAAACCGGTATTTTTCGTGCGCGACAACGGCGTCGGTTTCAACATGGCCGACGCCCA
CCGCCTCTTCTTGCCCTTCCAGCGCCTCAACACGGAAGCATCCTTCAAGGGGGAAGGGATCGGCCTTGCCACGGTGGCCC
GAATTGTCCAGCGCCACAACGGACGGATCTGGGCGGAAGGAGAGAAGGGAAAAGGGGCCACTTTCTACTTCACTCTCTGA

Upstream 100 bases:

>100_bases
TGCGCCCGACAGCGGCATATCTGTATACTCTAGCCGGATTAGCGGTTTCTTTCCGAACAGCGACGCCACCGTTTCAATAA
ACAACGACGGAATCCATCTT

Downstream 100 bases:

>100_bases
TTTACCGCCCTTGTCCAGTCAAAGAAAAGCCCGCGAGATGATTCGCGGGCTTTTCTTGATAGGGCCTTAACACTGTGCCG
ACGACGGGGCAGCTCCCTCA

Product: PAS/PAC sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 639; Mature: 638

Protein sequence:

>639_residues
MTEKTTVPWPSAAMAAAILAGLWIASRGNYLLFHTVTEMFSVLVSGGIFVIAWNARRFPTSPYLLFIGIAHICVGGVDLL
HAMAYKGMGVFPGNGPNLPTQLWIAARYIQSISLFMAPLFIGRTFRPGATLAAYLAVTATLIAAIFGGIFPPCFAEGTGL
TPFKIGSEYFISVIFLAALAFLRRKREFFDRRIVNILSAAIVLMAMAELAFTIYEDVYGLSNLVGHLLKVAAVFLIYKGT
VETSLTRPYDLLFRELKESEEKFAKAFHTAPTIMVITSLAEGRYLEVNEAFENTLGWRREEVLGRASREMGIWVDQEQRD
EIMGTLERGEKVLNRDVTLRKKQGGTIEGLYSAVGIELDNRKCLLGIVRDVTARRRAEREVKLLNAELTQRAQMLEDTNG
ELEVTVEQLEAVNQELEAANKELEAFSYTVSHDLRSPLTNINGAAQVIQELFGQELDPQCGRLVDIIHRETLRMNRLIDT
LLRFAHISRGEISPETVDLSALAKEVAGELQARHPQRQVSFAIAGNLTTHGDPRLMKIILDNLFGNAWKYTGTQEAAHIE
FGTILQDGKPVFFVRDNGVGFNMADAHRLFLPFQRLNTEASFKGEGIGLATVARIVQRHNGRIWAEGEKGKGATFYFTL

Sequences:

>Translated_639_residues
MTEKTTVPWPSAAMAAAILAGLWIASRGNYLLFHTVTEMFSVLVSGGIFVIAWNARRFPTSPYLLFIGIAHICVGGVDLL
HAMAYKGMGVFPGNGPNLPTQLWIAARYIQSISLFMAPLFIGRTFRPGATLAAYLAVTATLIAAIFGGIFPPCFAEGTGL
TPFKIGSEYFISVIFLAALAFLRRKREFFDRRIVNILSAAIVLMAMAELAFTIYEDVYGLSNLVGHLLKVAAVFLIYKGT
VETSLTRPYDLLFRELKESEEKFAKAFHTAPTIMVITSLAEGRYLEVNEAFENTLGWRREEVLGRASREMGIWVDQEQRD
EIMGTLERGEKVLNRDVTLRKKQGGTIEGLYSAVGIELDNRKCLLGIVRDVTARRRAEREVKLLNAELTQRAQMLEDTNG
ELEVTVEQLEAVNQELEAANKELEAFSYTVSHDLRSPLTNINGAAQVIQELFGQELDPQCGRLVDIIHRETLRMNRLIDT
LLRFAHISRGEISPETVDLSALAKEVAGELQARHPQRQVSFAIAGNLTTHGDPRLMKIILDNLFGNAWKYTGTQEAAHIE
FGTILQDGKPVFFVRDNGVGFNMADAHRLFLPFQRLNTEASFKGEGIGLATVARIVQRHNGRIWAEGEKGKGATFYFTL
>Mature_638_residues
TEKTTVPWPSAAMAAAILAGLWIASRGNYLLFHTVTEMFSVLVSGGIFVIAWNARRFPTSPYLLFIGIAHICVGGVDLLH
AMAYKGMGVFPGNGPNLPTQLWIAARYIQSISLFMAPLFIGRTFRPGATLAAYLAVTATLIAAIFGGIFPPCFAEGTGLT
PFKIGSEYFISVIFLAALAFLRRKREFFDRRIVNILSAAIVLMAMAELAFTIYEDVYGLSNLVGHLLKVAAVFLIYKGTV
ETSLTRPYDLLFRELKESEEKFAKAFHTAPTIMVITSLAEGRYLEVNEAFENTLGWRREEVLGRASREMGIWVDQEQRDE
IMGTLERGEKVLNRDVTLRKKQGGTIEGLYSAVGIELDNRKCLLGIVRDVTARRRAEREVKLLNAELTQRAQMLEDTNGE
LEVTVEQLEAVNQELEAANKELEAFSYTVSHDLRSPLTNINGAAQVIQELFGQELDPQCGRLVDIIHRETLRMNRLIDTL
LRFAHISRGEISPETVDLSALAKEVAGELQARHPQRQVSFAIAGNLTTHGDPRLMKIILDNLFGNAWKYTGTQEAAHIEF
GTILQDGKPVFFVRDNGVGFNMADAHRLFLPFQRLNTEASFKGEGIGLATVARIVQRHNGRIWAEGEKGKGATFYFTL

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI145693157, Length=244, Percent_Identity=29.0983606557377, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1790861, Length=227, Percent_Identity=28.1938325991189, Blast_Score=82, Evalue=8e-17,
Organism=Escherichia coli, GI1786912, Length=222, Percent_Identity=33.7837837837838, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1788549, Length=227, Percent_Identity=29.5154185022026, Blast_Score=81, Evalue=3e-16,
Organism=Escherichia coli, GI1789149, Length=260, Percent_Identity=26.1538461538462, Blast_Score=77, Evalue=5e-15,
Organism=Escherichia coli, GI1789808, Length=193, Percent_Identity=29.5336787564767, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1786600, Length=348, Percent_Identity=27.0114942528736, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1790436, Length=217, Percent_Identity=28.110599078341, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1786783, Length=250, Percent_Identity=28.4, Blast_Score=70, Evalue=5e-13,
Organism=Escherichia coli, GI48994928, Length=234, Percent_Identity=24.7863247863248, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1788393, Length=253, Percent_Identity=27.6679841897233, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1787894, Length=261, Percent_Identity=26.0536398467433, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1790346, Length=203, Percent_Identity=26.1083743842365, Blast_Score=66, Evalue=9e-12,
Organism=Escherichia coli, GI1790551, Length=274, Percent_Identity=24.0875912408759, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI87082128, Length=222, Percent_Identity=23.8738738738739, Blast_Score=62, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 71085; Mature: 70954

Theoretical pI: Translated: 7.01; Mature: 7.01

Prosite motif: PS50112 PAS ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEKTTVPWPSAAMAAAILAGLWIASRGNYLLFHTVTEMFSVLVSGGIFVIAWNARRFPT
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCEEEEEECCCCCCC
SPYLLFIGIAHICVGGVDLLHAMAYKGMGVFPGNGPNLPTQLWIAARYIQSISLFMAPLF
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IGRTFRPGATLAAYLAVTATLIAAIFGGIFPPCFAEGTGLTPFKIGSEYFISVIFLAALA
HCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHH
FLRRKREFFDRRIVNILSAAIVLMAMAELAFTIYEDVYGLSNLVGHLLKVAAVFLIYKGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VETSLTRPYDLLFRELKESEEKFAKAFHTAPTIMVITSLAEGRYLEVNEAFENTLGWRRE
HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEHHHHHHHHHCCHHH
EVLGRASREMGIWVDQEQRDEIMGTLERGEKVLNRDVTLRKKQGGTIEGLYSAVGIELDN
HHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCEEECC
RKCLLGIVRDVTARRRAEREVKLLNAELTQRAQMLEDTNGELEVTVEQLEAVNQELEAAN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHH
KELEAFSYTVSHDLRSPLTNINGAAQVIQELFGQELDPQCGRLVDIIHRETLRMNRLIDT
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LLRFAHISRGEISPETVDLSALAKEVAGELQARHPQRQVSFAIAGNLTTHGDPRLMKIIL
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCCHHHHHHHH
DNLFGNAWKYTGTQEAAHIEFGTILQDGKPVFFVRDNGVGFNMADAHRLFLPFQRLNTEA
HHHCCCCEECCCCCCCCEEEHHHHEECCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCC
SFKGEGIGLATVARIVQRHNGRIWAEGEKGKGATFYFTL
CCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCEEEEEC
>Mature Secondary Structure 
TEKTTVPWPSAAMAAAILAGLWIASRGNYLLFHTVTEMFSVLVSGGIFVIAWNARRFPT
CCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCEEEEEECCCCCCC
SPYLLFIGIAHICVGGVDLLHAMAYKGMGVFPGNGPNLPTQLWIAARYIQSISLFMAPLF
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IGRTFRPGATLAAYLAVTATLIAAIFGGIFPPCFAEGTGLTPFKIGSEYFISVIFLAALA
HCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHH
FLRRKREFFDRRIVNILSAAIVLMAMAELAFTIYEDVYGLSNLVGHLLKVAAVFLIYKGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VETSLTRPYDLLFRELKESEEKFAKAFHTAPTIMVITSLAEGRYLEVNEAFENTLGWRRE
HHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEHHHHHHHHHCCHHH
EVLGRASREMGIWVDQEQRDEIMGTLERGEKVLNRDVTLRKKQGGTIEGLYSAVGIELDN
HHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCEEECC
RKCLLGIVRDVTARRRAEREVKLLNAELTQRAQMLEDTNGELEVTVEQLEAVNQELEAAN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHH
KELEAFSYTVSHDLRSPLTNINGAAQVIQELFGQELDPQCGRLVDIIHRETLRMNRLIDT
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LLRFAHISRGEISPETVDLSALAKEVAGELQARHPQRQVSFAIAGNLTTHGDPRLMKIIL
HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHEEEEEECCCCCCCCHHHHHHHH
DNLFGNAWKYTGTQEAAHIEFGTILQDGKPVFFVRDNGVGFNMADAHRLFLPFQRLNTEA
HHHCCCCEECCCCCCCCEEEHHHHEECCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCC
SFKGEGIGLATVARIVQRHNGRIWAEGEKGKGATFYFTL
CCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]