| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is 78221926
Identifier: 78221926
GI number: 78221926
Start: 776204
End: 776860
Strand: Reverse
Name: 78221926
Synonym: Gmet_0706
Alternate gene names: NA
Gene position: 776860-776204 (Counterclockwise)
Preceding gene: 78221929
Following gene: 78221910
Centisome position: 19.43
GC content: 63.77
Gene sequence:
>657_bases ATGACCGACATCCCCAAATCATCGGGCGAGCGCTTCATCGAACGCATCATGGGGGAGCTGGACCCCACGTCGGAACGCTT CCAGGTCCTGGAGACCGCCAAGCGCTTCAAGTCATCATGGGTGGAACTGGGGGACCGGCTCCTGGCCGTCAGCTCACGGG ACCTCTACAAGGAATGGGGCTACGGAAGCTTCGAGGATTACTGCACCAAGGAGATCAGGATCAAGAAGGAGACGGCCCAG AAGCTGACTCTCGCGTACCGCTTCATGGAGAAGAACGAGCCGGAGCTCATGGCGCGCCGCGAAGAGCCCCGCCCCTTCCC CGACTACCGCTCCATCGACCTCCTGCGCCAGGCCCGGGAGGAGAAGGGGTTCTCCGACGAGGAGTACGCGGATCTGCGCA AGAGCGTGGTGGAACAGGAACGGAGCCATCCCACCGTCCTAAAACAGTTCAAGGAAGTGGCCAAGACCCGCGAGGAGCCC GTGAGCGACCCGTCGGTCCCCCTGAAAGCGGCCCTCGGCGCGGCGCGACGCCTCGACACCGCCCTGCGTGGGGTAGAGGA GCTTCCCGGCGACTACCGGGAGATGGTGGAGCGCCTCATTGCATCTCTGGAAGAAGAGCTGGAGGGGCTGCAGGTGGTCG TGGAACACCGCGCATAA
Upstream 100 bases:
>100_bases CCCCAGCCAAGGCAAAACATGGCGCCGATTCATTCTGCCGTTGGTGCGGGAGGCGTTCTGTGGTATCACTCGAAAAAGAA CCGAACAAGGAGAACCGATC
Downstream 100 bases:
>100_bases GAAAGCCAAGACGGCATAAACGCGAAGAGGCGACGGGAAATCCCGCCGCCTCTTCTGTTTTTCAGGTTTTTCCCGGTCCC GATCCCCGGTCCCGGGTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MTDIPKSSGERFIERIMGELDPTSERFQVLETAKRFKSSWVELGDRLLAVSSRDLYKEWGYGSFEDYCTKEIRIKKETAQ KLTLAYRFMEKNEPELMARREEPRPFPDYRSIDLLRQAREEKGFSDEEYADLRKSVVEQERSHPTVLKQFKEVAKTREEP VSDPSVPLKAALGAARRLDTALRGVEELPGDYREMVERLIASLEEELEGLQVVVEHRA
Sequences:
>Translated_218_residues MTDIPKSSGERFIERIMGELDPTSERFQVLETAKRFKSSWVELGDRLLAVSSRDLYKEWGYGSFEDYCTKEIRIKKETAQ KLTLAYRFMEKNEPELMARREEPRPFPDYRSIDLLRQAREEKGFSDEEYADLRKSVVEQERSHPTVLKQFKEVAKTREEP VSDPSVPLKAALGAARRLDTALRGVEELPGDYREMVERLIASLEEELEGLQVVVEHRA >Mature_217_residues TDIPKSSGERFIERIMGELDPTSERFQVLETAKRFKSSWVELGDRLLAVSSRDLYKEWGYGSFEDYCTKEIRIKKETAQK LTLAYRFMEKNEPELMARREEPRPFPDYRSIDLLRQAREEKGFSDEEYADLRKSVVEQERSHPTVLKQFKEVAKTREEPV SDPSVPLKAALGAARRLDTALRGVEELPGDYREMVERLIASLEEELEGLQVVVEHRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25374; Mature: 25243
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDIPKSSGERFIERIMGELDPTSERFQVLETAKRFKSSWVELGDRLLAVSSRDLYKEWG CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC YGSFEDYCTKEIRIKKETAQKLTLAYRFMEKNEPELMARREEPRPFPDYRSIDLLRQARE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHH EKGFSDEEYADLRKSVVEQERSHPTVLKQFKEVAKTREEPVSDPSVPLKAALGAARRLDT HCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH ALRGVEELPGDYREMVERLIASLEEELEGLQVVVEHRA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TDIPKSSGERFIERIMGELDPTSERFQVLETAKRFKSSWVELGDRLLAVSSRDLYKEWG CCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC YGSFEDYCTKEIRIKKETAQKLTLAYRFMEKNEPELMARREEPRPFPDYRSIDLLRQARE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHH EKGFSDEEYADLRKSVVEQERSHPTVLKQFKEVAKTREEPVSDPSVPLKAALGAARRLDT HCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH ALRGVEELPGDYREMVERLIASLEEELEGLQVVVEHRA HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA