| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221789
Identifier: 78221789
GI number: 78221789
Start: 610848
End: 611753
Strand: Direct
Name: 78221789
Synonym: Gmet_0568
Alternate gene names: NA
Gene position: 610848-611753 (Clockwise)
Preceding gene: 78221788
Following gene: 78221790
Centisome position: 15.28
GC content: 62.14
Gene sequence:
>906_bases ATGATACGTTCAACCTTCAGGCGTTTTCTGCTGTTGTTCCTCCCCCTGCTCCTCCTTGCCGGCTGCAAGGGCGAAGGGAG CCGCCCCGTGGTGAAGATCGGCTACATGCTCTGCAACAACGAGCAGGAAACCATGTCCCGCTTCCTCCCCCTGACCCGCT ACCTTTCCGATAAGTGCGGCGTCGACTTCGTGGCGGTGCCGGTGGATACCCACGATTTCGAGAAACGGTTCAAGGCCGGG GAGTTCACCTTCACCCATTCCAACTCCCTCATCTACGTCATCCTCCACGAGAACGAGGGGGTTCAACTGCTGGCCTCGGA GAAACGGGGGAAATTCGGCGCCCGCAGTGCCGGCGCCCTCATCGCCCGCAAGGGGAGCGGCATCGAAAAGCTCGCCGACA TCCGGGGGAAGCGCCTCGCCTTCGGCCCCATGCTGGCCCCCACCGGGTATCTGGCCGAGTACGACCTGATGCTTTCCGCC GGCATCAACCCGGAGCACGACCTGGGGACCTACTCCATTCCTCCCGGCTCCTACAAGCATGAAAAGCTCATCTACGGCGT CCTCTACGGCCAGTACGACGTGGCCGCCGCCCCCATCCTCGACCTTGAAACCATGACCCGGGAGGGGAAAATCGCTGCCG ACGATTTCGTCATCCTCGCCCAGAGCAAACCGGTTCCCTACTGCACCTTCGGCGTGGCCAAGGGGGCCGACCCGGCCCTG GTGAAGAAGGTAAAGGAGGCGCTCCTGGCCCTGAAACCCGCCGACACCGCCGAGGTGGACGGCGAACGGATCAAGGTGCT GAAGGCTGCCTGGATCGACGGCTACGAGGAACTCCTCGACAGCGACTACGACTCCATCCGCGAAATGGCGAAACGGGTGA ATATGCCGCCGTATCAGAAGTACTAA
Upstream 100 bases:
>100_bases TGCCGCGGAAGGGCATACGTCGTGCATCAATCGCTGGAGGGGGAAGACCCCGCATGCTGGTAAGGTATTGCCGGCCACTC ACCGTCACAGGAAACCATAG
Downstream 100 bases:
>100_bases GAAATTTAATAACACGGAGAAACTGAGGGCACGGAGAAAAAACCAAGCCTGACAGATAAGTTGTGAATCGATGCTGCTAT GCTCAGTCATGGATTTTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MIRSTFRRFLLLFLPLLLLAGCKGEGSRPVVKIGYMLCNNEQETMSRFLPLTRYLSDKCGVDFVAVPVDTHDFEKRFKAG EFTFTHSNSLIYVILHENEGVQLLASEKRGKFGARSAGALIARKGSGIEKLADIRGKRLAFGPMLAPTGYLAEYDLMLSA GINPEHDLGTYSIPPGSYKHEKLIYGVLYGQYDVAAAPILDLETMTREGKIAADDFVILAQSKPVPYCTFGVAKGADPAL VKKVKEALLALKPADTAEVDGERIKVLKAAWIDGYEELLDSDYDSIREMAKRVNMPPYQKY
Sequences:
>Translated_301_residues MIRSTFRRFLLLFLPLLLLAGCKGEGSRPVVKIGYMLCNNEQETMSRFLPLTRYLSDKCGVDFVAVPVDTHDFEKRFKAG EFTFTHSNSLIYVILHENEGVQLLASEKRGKFGARSAGALIARKGSGIEKLADIRGKRLAFGPMLAPTGYLAEYDLMLSA GINPEHDLGTYSIPPGSYKHEKLIYGVLYGQYDVAAAPILDLETMTREGKIAADDFVILAQSKPVPYCTFGVAKGADPAL VKKVKEALLALKPADTAEVDGERIKVLKAAWIDGYEELLDSDYDSIREMAKRVNMPPYQKY >Mature_301_residues MIRSTFRRFLLLFLPLLLLAGCKGEGSRPVVKIGYMLCNNEQETMSRFLPLTRYLSDKCGVDFVAVPVDTHDFEKRFKAG EFTFTHSNSLIYVILHENEGVQLLASEKRGKFGARSAGALIARKGSGIEKLADIRGKRLAFGPMLAPTGYLAEYDLMLSA GINPEHDLGTYSIPPGSYKHEKLIYGVLYGQYDVAAAPILDLETMTREGKIAADDFVILAQSKPVPYCTFGVAKGADPAL VKKVKEALLALKPADTAEVDGERIKVLKAAWIDGYEELLDSDYDSIREMAKRVNMPPYQKY
Specific function: Unknown
COG id: COG3221
COG function: function code P; ABC-type phosphate/phosphonate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33369; Mature: 33369
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRSTFRRFLLLFLPLLLLAGCKGEGSRPVVKIGYMLCNNEQETMSRFLPLTRYLSDKCG CCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHCC VDFVAVPVDTHDFEKRFKAGEFTFTHSNSLIYVILHENEGVQLLASEKRGKFGARSAGAL CCEEEEECCCHHHHHHHCCCCEEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCCCCEE IARKGSGIEKLADIRGKRLAFGPMLAPTGYLAEYDLMLSAGINPEHDLGTYSIPPGSYKH EEECCCCHHHHHHCCCCEEEECCCCCCCCCHHEEEEEEECCCCCCCCCCCEECCCCCCCC EKLIYGVLYGQYDVAAAPILDLETMTREGKIAADDFVILAQSKPVPYCTFGVAKGADPAL CEEEEEEEECCCCHHHCCEECHHHHCCCCCEECCCEEEEECCCCCCEEEECCCCCCCHHH VKKVKEALLALKPADTAEVDGERIKVLKAAWIDGYEELLDSDYDSIREMAKRVNMPPYQK HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHCCCCCCCC Y C >Mature Secondary Structure MIRSTFRRFLLLFLPLLLLAGCKGEGSRPVVKIGYMLCNNEQETMSRFLPLTRYLSDKCG CCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHCC VDFVAVPVDTHDFEKRFKAGEFTFTHSNSLIYVILHENEGVQLLASEKRGKFGARSAGAL CCEEEEECCCHHHHHHHCCCCEEEEECCCEEEEEEECCCCEEEEECCCCCCCCCCCCCEE IARKGSGIEKLADIRGKRLAFGPMLAPTGYLAEYDLMLSAGINPEHDLGTYSIPPGSYKH EEECCCCHHHHHHCCCCEEEECCCCCCCCCHHEEEEEEECCCCCCCCCCCEECCCCCCCC EKLIYGVLYGQYDVAAAPILDLETMTREGKIAADDFVILAQSKPVPYCTFGVAKGADPAL CEEEEEEEECCCCHHHCCEECHHHHCCCCCEECCCEEEEECCCCCCEEEECCCCCCCHHH VKKVKEALLALKPADTAEVDGERIKVLKAAWIDGYEELLDSDYDSIREMAKRVNMPPYQK HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHHHHHHCCCHHHHHHHHHHCCCCCCCC Y C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA