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The map label for this gene is ycgR [H]

Identifier: 78221784

GI number: 78221784

Start: 606130

End: 608031

Strand: Direct

Name: ycgR [H]

Synonym: Gmet_0563

Alternate gene names: 78221784

Gene position: 606130-608031 (Clockwise)

Preceding gene: 78221783

Following gene: 78221785

Centisome position: 15.16

GC content: 64.67

Gene sequence:

>1902_bases
ATGGCTGTAAACATCTTCGGATCAAAACCAAAGGAGGCGTGCGAGGTCCACGGACACCATTCGGGGTCCGGGAACCGGAT
GCTCGTCGCCATGATTCTCATCTCCCTCTCCCTGGTGGTGTGGCACGTCGGGTCCACCGGCACGGGGGGGCACCCGGCAG
CCTCCGGGGCCGCGCCGGTCCCGTTTCCCGTGCGGCTCGGCAGCGAGCTCCGGGATCTGTTCTTCAGCGATCACGGCGTC
CTGGCCGAACTCCGGGACGTGTTCCCCTACTTCCTCGTCGGCATCCTCATCGCCGGATATCTCCGCACCTTCAAGATCGC
CGTCAAGCTCCAGGCCAAGCTCCGGAAGTACGGCGTGCTCAGCGTCTTTATCGCCTCCTTCGTGGGGATCATCACCCCCC
TGTGCGCCTGCGGCACCGTGACCACCGCCATCAGCCTCCTGGTGGCGGGGATTCCCCTGGCGCCGGTCATGGCCCTCATG
GTGACCTCGCCGCTGCTGAGCCCCTCCACCTATCTCCTCACCCTGAACGATCTCGGCCCCGAATGGACCGCCATCAGGAC
CATCTCCGCTCTCTCCATGGGGATCTTCGCCGGTCTCGTCACCCACTTCCTCAGCAATCGGCCCGGGTTCCGGAAAAACG
AAATCTTCATCGAGGGGGCCCTGGTGAGGGGGGACTTCCACGACGAGGACTATCCCGACGAGCGGCTCCGGTGCAACTGC
CGGCGCCAGTTCGGCAACCGGATCGCCGTCAGGACCGGGAACAAGTTTCTCATCTTCCTGGCCAAGTCCGTGGAAATGCT
CTGGGTGGTGGGGAAGTACGTCATCGTCGGCGTCGTCATCGGGGCCGTGGTGGAGCGGTACATGCCCCAGGAGTGGGTCT
ACCGCTTCTTCGGCCAGGGGGACCCCCTCGGCATCCTCTGGGTGACCCTGGCATCGGTGCCCATGTTCCTGCACCAGATC
AGCGCCTCCAGCATCATCCACCACATCAAGGGCTCCCTTGGCGGAACCCTCGACGCCGGCGCGGCCCTGGCGTTCATGAT
CGGTGGGCCGGTCACCGCCGTGCCCACCATGGTGCTCTTCTGGAGCTTCTTCCGGAAGCGGGTCTTTTTCCTCTACATGT
TCGTCTGTCTCTCGGGAACGCTCCTCATTGCCTACGCGTTCCAGGCTCTCGTCTTCACGCCCGGCGTCGATATCGGGAAT
CCCCTGCTGAAGGGGGTCGCTTCGCTGTCGGGGGGGGAGGCCTCCGTCATTGCGAAGCAGGATGCCAACGTGCGGATGGT
TCTGGACCCGGGAGGCAAGGGGGTTGTCGCCACCTACAGCAACGCGGTTGACGGCCGGGGACCCGTGGTGTTCGACGGGG
TACGGGGGCGTTTCACCGCTTCCCTGGCCAACCGGTATGACAATCGGGCCTACATCGGCAACATCGCCGACTGGCTCGGG
GAGAACTCCCTCACCGCCGCCTCCGCCAAGATTCTCGTCTACAGCCTCGGCAATGGTGCCGGCGATGCCGCATCGCTCCT
GGGAGAGAAGACCCTGGCCGAGCTGGGTGCCAGGGGATTTACCGTCAAGGCGGTCGAAAGGCATGATGTGCCGCGAATTA
CCGAGGGGGTGCTGGCAGGCTGCGGCCAGGTGTGGCTCTTCTTCGGCGACGACCACGCCGACGGGTTGAACGATGCCGAA
GTGAAGCTCCTTGCGGACTTTAATGCCAACGGGGGGGGCGCCCTGATTGTGCCCGGCGTGGCGAACACCCGCGGGGCCAA
CCTCCTTGTGTCCCGCTATGGCGTGACCTTCTCCGGCGTTGCCGACAACGGTCCGGAGGTGCGGGTTTCCGCCGCGTCAA
CGGTTCTCAACCGGACCGCCGAGTGGCTCGGCTCCGTTCTGAAACTGGTAAAAAAGGCCTGA

Upstream 100 bases:

>100_bases
GCCATCATGGGGTTCGGGTCGATTCTGTCATGCGCCCGGCGGTTGAGGAAGGAACAACGGAAAAAGACGGTTTCGGAATA
GTCGGCATGGATGGGACTGC

Downstream 100 bases:

>100_bases
CACGGGTGCCGCCGGCGCCCTTCACGTATCCGGGATGAGATCACCATATTCAGGAGGAATGGCATGAAATCACAGGTTTT
TGATGTCCAGAAACTCAAGA

Product: permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 633; Mature: 632

Protein sequence:

>633_residues
MAVNIFGSKPKEACEVHGHHSGSGNRMLVAMILISLSLVVWHVGSTGTGGHPAASGAAPVPFPVRLGSELRDLFFSDHGV
LAELRDVFPYFLVGILIAGYLRTFKIAVKLQAKLRKYGVLSVFIASFVGIITPLCACGTVTTAISLLVAGIPLAPVMALM
VTSPLLSPSTYLLTLNDLGPEWTAIRTISALSMGIFAGLVTHFLSNRPGFRKNEIFIEGALVRGDFHDEDYPDERLRCNC
RRQFGNRIAVRTGNKFLIFLAKSVEMLWVVGKYVIVGVVIGAVVERYMPQEWVYRFFGQGDPLGILWVTLASVPMFLHQI
SASSIIHHIKGSLGGTLDAGAALAFMIGGPVTAVPTMVLFWSFFRKRVFFLYMFVCLSGTLLIAYAFQALVFTPGVDIGN
PLLKGVASLSGGEASVIAKQDANVRMVLDPGGKGVVATYSNAVDGRGPVVFDGVRGRFTASLANRYDNRAYIGNIADWLG
ENSLTAASAKILVYSLGNGAGDAASLLGEKTLAELGARGFTVKAVERHDVPRITEGVLAGCGQVWLFFGDDHADGLNDAE
VKLLADFNANGGGALIVPGVANTRGANLLVSRYGVTFSGVADNGPEVRVSAASTVLNRTAEWLGSVLKLVKKA

Sequences:

>Translated_633_residues
MAVNIFGSKPKEACEVHGHHSGSGNRMLVAMILISLSLVVWHVGSTGTGGHPAASGAAPVPFPVRLGSELRDLFFSDHGV
LAELRDVFPYFLVGILIAGYLRTFKIAVKLQAKLRKYGVLSVFIASFVGIITPLCACGTVTTAISLLVAGIPLAPVMALM
VTSPLLSPSTYLLTLNDLGPEWTAIRTISALSMGIFAGLVTHFLSNRPGFRKNEIFIEGALVRGDFHDEDYPDERLRCNC
RRQFGNRIAVRTGNKFLIFLAKSVEMLWVVGKYVIVGVVIGAVVERYMPQEWVYRFFGQGDPLGILWVTLASVPMFLHQI
SASSIIHHIKGSLGGTLDAGAALAFMIGGPVTAVPTMVLFWSFFRKRVFFLYMFVCLSGTLLIAYAFQALVFTPGVDIGN
PLLKGVASLSGGEASVIAKQDANVRMVLDPGGKGVVATYSNAVDGRGPVVFDGVRGRFTASLANRYDNRAYIGNIADWLG
ENSLTAASAKILVYSLGNGAGDAASLLGEKTLAELGARGFTVKAVERHDVPRITEGVLAGCGQVWLFFGDDHADGLNDAE
VKLLADFNANGGGALIVPGVANTRGANLLVSRYGVTFSGVADNGPEVRVSAASTVLNRTAEWLGSVLKLVKKA
>Mature_632_residues
AVNIFGSKPKEACEVHGHHSGSGNRMLVAMILISLSLVVWHVGSTGTGGHPAASGAAPVPFPVRLGSELRDLFFSDHGVL
AELRDVFPYFLVGILIAGYLRTFKIAVKLQAKLRKYGVLSVFIASFVGIITPLCACGTVTTAISLLVAGIPLAPVMALMV
TSPLLSPSTYLLTLNDLGPEWTAIRTISALSMGIFAGLVTHFLSNRPGFRKNEIFIEGALVRGDFHDEDYPDERLRCNCR
RQFGNRIAVRTGNKFLIFLAKSVEMLWVVGKYVIVGVVIGAVVERYMPQEWVYRFFGQGDPLGILWVTLASVPMFLHQIS
ASSIIHHIKGSLGGTLDAGAALAFMIGGPVTAVPTMVLFWSFFRKRVFFLYMFVCLSGTLLIAYAFQALVFTPGVDIGNP
LLKGVASLSGGEASVIAKQDANVRMVLDPGGKGVVATYSNAVDGRGPVVFDGVRGRFTASLANRYDNRAYIGNIADWLGE
NSLTAASAKILVYSLGNGAGDAASLLGEKTLAELGARGFTVKAVERHDVPRITEGVLAGCGQVWLFFGDDHADGLNDAEV
KLLADFNANGGGALIVPGVANTRGANLLVSRYGVTFSGVADNGPEVRVSAASTVLNRTAEWLGSVLKLVKKA

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0718 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005524 [H]

Pfam domain/function: PF03773 DUF318 [H]

EC number: NA

Molecular weight: Translated: 67439; Mature: 67308

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVNIFGSKPKEACEVHGHHSGSGNRMLVAMILISLSLVVWHVGSTGTGGHPAASGAAPV
CEEEECCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PFPVRLGSELRDLFFSDHGVLAELRDVFPYFLVGILIAGYLRTFKIAVKLQAKLRKYGVL
CCHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVFIASFVGIITPLCACGTVTTAISLLVAGIPLAPVMALMVTSPLLSPSTYLLTLNDLGP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEEECCCC
EWTAIRTISALSMGIFAGLVTHFLSNRPGFRKNEIFIEGALVRGDFHDEDYPDERLRCNC
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHH
RRQFGNRIAVRTGNKFLIFLAKSVEMLWVVGKYVIVGVVIGAVVERYMPQEWVYRFFGQG
HHHHCCEEEEEECCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC
DPLGILWVTLASVPMFLHQISASSIIHHIKGSLGGTLDAGAALAFMIGGPVTAVPTMVLF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEHEECCCHHHHHHHHHH
WSFFRKRVFFLYMFVCLSGTLLIAYAFQALVFTPGVDIGNPLLKGVASLSGGEASVIAKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEEEEC
DANVRMVLDPGGKGVVATYSNAVDGRGPVVFDGVRGRFTASLANRYDNRAYIGNIADWLG
CCCEEEEECCCCCEEEEEECCCCCCCCCEEECCCCCHHHHHHHHHCCCCEEECCHHHHCC
ENSLTAASAKILVYSLGNGAGDAASLLGEKTLAELGARGFTVKAVERHDVPRITEGVLAG
CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHCCCCHHHHHHHHC
CGQVWLFFGDDHADGLNDAEVKLLADFNANGGGALIVPGVANTRGANLLVSRYGVTFSGV
CCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCCEEEEEECCCEEECC
ADNGPEVRVSAASTVLNRTAEWLGSVLKLVKKA
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AVNIFGSKPKEACEVHGHHSGSGNRMLVAMILISLSLVVWHVGSTGTGGHPAASGAAPV
EEEECCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PFPVRLGSELRDLFFSDHGVLAELRDVFPYFLVGILIAGYLRTFKIAVKLQAKLRKYGVL
CCHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVFIASFVGIITPLCACGTVTTAISLLVAGIPLAPVMALMVTSPLLSPSTYLLTLNDLGP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEEECCCC
EWTAIRTISALSMGIFAGLVTHFLSNRPGFRKNEIFIEGALVRGDFHDEDYPDERLRCNC
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHH
RRQFGNRIAVRTGNKFLIFLAKSVEMLWVVGKYVIVGVVIGAVVERYMPQEWVYRFFGQG
HHHHCCEEEEEECCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC
DPLGILWVTLASVPMFLHQISASSIIHHIKGSLGGTLDAGAALAFMIGGPVTAVPTMVLF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHEEHEECCCHHHHHHHHHH
WSFFRKRVFFLYMFVCLSGTLLIAYAFQALVFTPGVDIGNPLLKGVASLSGGEASVIAKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCEEEEEEC
DANVRMVLDPGGKGVVATYSNAVDGRGPVVFDGVRGRFTASLANRYDNRAYIGNIADWLG
CCCEEEEECCCCCEEEEEECCCCCCCCCEEECCCCCHHHHHHHHHCCCCEEECCHHHHCC
ENSLTAASAKILVYSLGNGAGDAASLLGEKTLAELGARGFTVKAVERHDVPRITEGVLAG
CCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEHHHCCCCHHHHHHHHC
CGQVWLFFGDDHADGLNDAEVKLLADFNANGGGALIVPGVANTRGANLLVSRYGVTFSGV
CCEEEEEECCCCCCCCCCCCEEEEEEECCCCCCEEEECCCCCCCCCEEEEEECCCEEECC
ADNGPEVRVSAASTVLNRTAEWLGSVLKLVKKA
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]