| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221783
Identifier: 78221783
GI number: 78221783
Start: 605166
End: 606110
Strand: Direct
Name: 78221783
Synonym: Gmet_0562
Alternate gene names: NA
Gene position: 605166-606110 (Clockwise)
Preceding gene: 78221782
Following gene: 78221784
Centisome position: 15.14
GC content: 62.54
Gene sequence:
>945_bases GTGCCCGTGACACAGCCCGATCTCCTTAAACGGACGGTCCGCTTCCTCGCCTCGACGGAACTGGCCGTTATCCTGTTCCT GGCAACAGCCCTCCTGGCCATCCCCGGCACCTTCACCGACAGCAGGGCACTCTACGTCCATCCGGTTTTCCTCTGCCTAC TGGGGGGGCTGGCCCTGAACCTCGTCCTCTGCACGGTGCGCCGGTTCCGGTCCATTTCGGTGCCGGTGCTGATCCTGCAC CTGGGAGTGCTGGTGGTCTGCGGCGGCGTCATGGCCCGGGCTTTCGGCTACGTGGCCACCGTCAACATCTATGAGGGAAC CACGGTGGACACGGTCTACCGGTGGGACCTGAAACGGGATGTTCCCCTGGGCGCCGCGCTGACCATCAAGCGGATCAACC GGGAGTATTACCCGATCCCGGTCAAGGTGGGAGTACTCAGGGGGACGGTGAAGGATTCCCTCCACACCCTGAAGACCGGC GACAGCTTCGCGGCGGGACCCTACCGCGTAACGGCGGATTCGCTCCAGTTCCCCGCGGAAGTCCTCAAACTCTCCGTCTT TCAGGACGGACGGCTGATAGGCACCTGCGACACCGGGGGGCTGAGGGCGCTCCCGGCGAACTTCCCCTACGATTTCAAGC TGGTGGCGTTCCAGAATCCGGTCATGAAGCGCCTCTGGGTCGATCTGGCCCTCACGCGCGATTCCGCTCCCGCGGTGTCG GGAACGGCCGCGGTCAATGACCCCTTTATCTGGAACGGGCTCTATTTCTACAATACCCAAGTGGATGTGGATAAGGTGGG CACGCCTTTTGCTGGGATCCAGGTGGTGAGGGATCCCGGAAGACCCTGTGTTTTCGCCGGGTTCGCCATCATGGGGTTCG GGTCGATTCTGTCATGCGCCCGGCGGTTGAGGAAGGAACAACGGAAAAAGACGGTTTCGGAATAG
Upstream 100 bases:
>100_bases GACGCCTATGCCCGGTTGCTCAAGTCGTCGGATGCCGGCGGCAAGTCCCGCAAGGCGGTCAGGGATTTCCTCAAGGCGAA GAAGCTGATCTGATTCATCC
Downstream 100 bases:
>100_bases TCGGCATGGATGGGACTGCATGGCTGTAAACATCTTCGGATCAAAACCAAAGGAGGCGTGCGAGGTCCACGGACACCATT CGGGGTCCGGGAACCGGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MPVTQPDLLKRTVRFLASTELAVILFLATALLAIPGTFTDSRALYVHPVFLCLLGGLALNLVLCTVRRFRSISVPVLILH LGVLVVCGGVMARAFGYVATVNIYEGTTVDTVYRWDLKRDVPLGAALTIKRINREYYPIPVKVGVLRGTVKDSLHTLKTG DSFAAGPYRVTADSLQFPAEVLKLSVFQDGRLIGTCDTGGLRALPANFPYDFKLVAFQNPVMKRLWVDLALTRDSAPAVS GTAAVNDPFIWNGLYFYNTQVDVDKVGTPFAGIQVVRDPGRPCVFAGFAIMGFGSILSCARRLRKEQRKKTVSE
Sequences:
>Translated_314_residues MPVTQPDLLKRTVRFLASTELAVILFLATALLAIPGTFTDSRALYVHPVFLCLLGGLALNLVLCTVRRFRSISVPVLILH LGVLVVCGGVMARAFGYVATVNIYEGTTVDTVYRWDLKRDVPLGAALTIKRINREYYPIPVKVGVLRGTVKDSLHTLKTG DSFAAGPYRVTADSLQFPAEVLKLSVFQDGRLIGTCDTGGLRALPANFPYDFKLVAFQNPVMKRLWVDLALTRDSAPAVS GTAAVNDPFIWNGLYFYNTQVDVDKVGTPFAGIQVVRDPGRPCVFAGFAIMGFGSILSCARRLRKEQRKKTVSE >Mature_313_residues PVTQPDLLKRTVRFLASTELAVILFLATALLAIPGTFTDSRALYVHPVFLCLLGGLALNLVLCTVRRFRSISVPVLILHL GVLVVCGGVMARAFGYVATVNIYEGTTVDTVYRWDLKRDVPLGAALTIKRINREYYPIPVKVGVLRGTVKDSLHTLKTGD SFAAGPYRVTADSLQFPAEVLKLSVFQDGRLIGTCDTGGLRALPANFPYDFKLVAFQNPVMKRLWVDLALTRDSAPAVSG TAAVNDPFIWNGLYFYNTQVDVDKVGTPFAGIQVVRDPGRPCVFAGFAIMGFGSILSCARRLRKEQRKKTVSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34387; Mature: 34256
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVTQPDLLKRTVRFLASTELAVILFLATALLAIPGTFTDSRALYVHPVFLCLLGGLALN CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHH LVLCTVRRFRSISVPVLILHLGVLVVCGGVMARAFGYVATVNIYEGTTVDTVYRWDLKRD HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCEEEEEEEECCCCC VPLGAALTIKRINREYYPIPVKVGVLRGTVKDSLHTLKTGDSFAAGPYRVTADSLQFPAE CCCCHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHCCHH VLKLSVFQDGRLIGTCDTGGLRALPANFPYDFKLVAFQNPVMKRLWVDLALTRDSAPAVS HHEEHEECCCCEEEEECCCCCEECCCCCCCCEEEEEECCHHHHHHHHHHEEECCCCCCCC GTAAVNDPFIWNGLYFYNTQVDVDKVGTPFAGIQVVRDPGRPCVFAGFAIMGFGSILSCA CCCCCCCCEEECCEEEEECEEEHHHCCCCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHH RRLRKEQRKKTVSE HHHHHHHHHHCCCC >Mature Secondary Structure PVTQPDLLKRTVRFLASTELAVILFLATALLAIPGTFTDSRALYVHPVFLCLLGGLALN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHH LVLCTVRRFRSISVPVLILHLGVLVVCGGVMARAFGYVATVNIYEGTTVDTVYRWDLKRD HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCEEEEEEEECCCCC VPLGAALTIKRINREYYPIPVKVGVLRGTVKDSLHTLKTGDSFAAGPYRVTADSLQFPAE CCCCHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHCCCCCCCCCCEEEEHHHHHCCHH VLKLSVFQDGRLIGTCDTGGLRALPANFPYDFKLVAFQNPVMKRLWVDLALTRDSAPAVS HHEEHEECCCCEEEEECCCCCEECCCCCCCCEEEEEECCHHHHHHHHHHEEECCCCCCCC GTAAVNDPFIWNGLYFYNTQVDVDKVGTPFAGIQVVRDPGRPCVFAGFAIMGFGSILSCA CCCCCCCCEEECCEEEEECEEEHHHCCCCCCCEEEEECCCCCEEEHHHHHHHHHHHHHHH RRLRKEQRKKTVSE HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA