Definition Geobacter metallireducens GS-15 chromosome, complete genome.
Accession NC_007517
Length 3,997,420

Click here to switch to the map view.

The map label for this gene is 78221778

Identifier: 78221778

GI number: 78221778

Start: 597124

End: 597966

Strand: Direct

Name: 78221778

Synonym: Gmet_0557

Alternate gene names: NA

Gene position: 597124-597966 (Clockwise)

Preceding gene: 78221777

Following gene: 78221779

Centisome position: 14.94

GC content: 54.57

Gene sequence:

>843_bases
ATGAAGAAACGATTTCTGGCAACAGCGGTAATGGCGGCCATCATGGCCTGGGGAGCGATTGTGAACGCGGGACCTGGCAA
GATAAAAAATACGGTTCACAATATGTCGAGCGTTGCGCCATCCGGGTTTGTAGGGACGAGGCACTGGTACAGCACCGACA
CTGATGAGGTCTGCGTTTTCTGCCACACGCCCCACAACGCCAAGCCGGCCCAACCCTTGTGGAACAAGGTGAATCCTACC
CAGGCTTTCAATATGTACACCTCGTCAACCACTCTGACATCGGTGGCCAAGAAGGTAACAGCGCCGAGCCCCGAATCACT
GTTGTGCCTGAGTTGTCATGACGGCCGCACGGCTATCAACGTTCTCCACAACAGCTCTGCCGGAATTGATGCTGGCGGTG
GGGACAAAAAGCTGATGATTGGGGGGGTATATGATGATCCCACGGCCCCGGCGGGGGTTACCGGCATTCCGATGAATATA
GACACTTTTACGATACCCAATACCTATAGGGCCAACCTCGGTAGGACTGAAGCTGACAGGTACGCCGGCACCAATCTCAT
GGACGACCATCCCATCTCCTTCTCCTATACCGCCGCCTATAACGAAAAGGTGGGCAGCGGATCAAGCGCCATTAATCCGA
TTGCCACTCCCTTGTCAAAGGGGCTGCGGTTTTTCGGTTCCAACAACCGCATGGAGTGTTCCACCTGCCACGATCCCCAT
GTGGATTACGGCATGGATTTCGATGGCAATCCGACCTATAGCGGCGGCAATACTGCATTAAGACCATTTCTCGTACGCGA
TAATACCGGCAGCGCCATGTGCCTGGCCTGCCACAACAAATAG

Upstream 100 bases:

>100_bases
TCATGAGAAAGGCCCTCGGCATGCCGAGCTGGTAGAACCCCTCGGGGTGGATGCAGGACGCAGCGCGGCGTAAGGGATTA
CACGCAACGAGGTTTTCAAG

Downstream 100 bases:

>100_bases
GACGTGTCTGCCTTGCTCAGGAGCTCGCCATGTATGGAATGATAATGAAAGCCTCTGTAGTGATACTGCTGGCGATAATG
GTCCCGGTTTCAGCGAGTGC

Product: cytochrome c family protein

Products: NA

Alternate protein names: Multiheme C-Type Cytochrome

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MKKRFLATAVMAAIMAWGAIVNAGPGKIKNTVHNMSSVAPSGFVGTRHWYSTDTDEVCVFCHTPHNAKPAQPLWNKVNPT
QAFNMYTSSTTLTSVAKKVTAPSPESLLCLSCHDGRTAINVLHNSSAGIDAGGGDKKLMIGGVYDDPTAPAGVTGIPMNI
DTFTIPNTYRANLGRTEADRYAGTNLMDDHPISFSYTAAYNEKVGSGSSAINPIATPLSKGLRFFGSNNRMECSTCHDPH
VDYGMDFDGNPTYSGGNTALRPFLVRDNTGSAMCLACHNK

Sequences:

>Translated_280_residues
MKKRFLATAVMAAIMAWGAIVNAGPGKIKNTVHNMSSVAPSGFVGTRHWYSTDTDEVCVFCHTPHNAKPAQPLWNKVNPT
QAFNMYTSSTTLTSVAKKVTAPSPESLLCLSCHDGRTAINVLHNSSAGIDAGGGDKKLMIGGVYDDPTAPAGVTGIPMNI
DTFTIPNTYRANLGRTEADRYAGTNLMDDHPISFSYTAAYNEKVGSGSSAINPIATPLSKGLRFFGSNNRMECSTCHDPH
VDYGMDFDGNPTYSGGNTALRPFLVRDNTGSAMCLACHNK
>Mature_280_residues
MKKRFLATAVMAAIMAWGAIVNAGPGKIKNTVHNMSSVAPSGFVGTRHWYSTDTDEVCVFCHTPHNAKPAQPLWNKVNPT
QAFNMYTSSTTLTSVAKKVTAPSPESLLCLSCHDGRTAINVLHNSSAGIDAGGGDKKLMIGGVYDDPTAPAGVTGIPMNI
DTFTIPNTYRANLGRTEADRYAGTNLMDDHPISFSYTAAYNEKVGSGSSAINPIATPLSKGLRFFGSNNRMECSTCHDPH
VDYGMDFDGNPTYSGGNTALRPFLVRDNTGSAMCLACHNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29875; Mature: 29875

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: PS51008 MULTIHEME_CYTC L=rr

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRFLATAVMAAIMAWGAIVNAGPGKIKNTVHNMSSVAPSGFVGTRHWYSTDTDEVCVF
CCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEE
CHTPHNAKPAQPLWNKVNPTQAFNMYTSSTTLTSVAKKVTAPSPESLLCLSCHDGRTAIN
EECCCCCCCCCHHHCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCEEEEEECCCCEEEE
VLHNSSAGIDAGGGDKKLMIGGVYDDPTAPAGVTGIPMNIDTFTIPNTYRANLGRTEADR
EEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHH
YAGTNLMDDHPISFSYTAAYNEKVGSGSSAINPIATPLSKGLRFFGSNNRMECSTCHDPH
HCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCC
VDYGMDFDGNPTYSGGNTALRPFLVRDNTGSAMCLACHNK
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCC
>Mature Secondary Structure
MKKRFLATAVMAAIMAWGAIVNAGPGKIKNTVHNMSSVAPSGFVGTRHWYSTDTDEVCVF
CCCHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEE
CHTPHNAKPAQPLWNKVNPTQAFNMYTSSTTLTSVAKKVTAPSPESLLCLSCHDGRTAIN
EECCCCCCCCCHHHCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCEEEEEECCCCEEEE
VLHNSSAGIDAGGGDKKLMIGGVYDDPTAPAGVTGIPMNIDTFTIPNTYRANLGRTEADR
EEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHH
YAGTNLMDDHPISFSYTAAYNEKVGSGSSAINPIATPLSKGLRFFGSNNRMECSTCHDPH
HCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCC
VDYGMDFDGNPTYSGGNTALRPFLVRDNTGSAMCLACHNK
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA