| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221766
Identifier: 78221766
GI number: 78221766
Start: 582467
End: 583444
Strand: Reverse
Name: 78221766
Synonym: Gmet_0545
Alternate gene names: NA
Gene position: 583444-582467 (Counterclockwise)
Preceding gene: 78221767
Following gene: 78221765
Centisome position: 14.6
GC content: 61.35
Gene sequence:
>978_bases GTGCACCGTGTCGGCTTTACCACCACTATCCCGCTGGAAGTGATCCTTGCGGCGGAAAAGGTCCCCGTGGACCTGAACAA CGTCTTCATCACCAGCCCCCGGAGCCACCAGCTCATCGAGGAGGCAGAGGTGGACGGCTTCCCCCGCAGCACCTGCAGCT GGATCAAGGGGATGTACGCGGCGATCCTCGAAAAGGGGATAAAAGAACTGATAGCGGTAACCGAGGGGGATTGCAGCAAC ACCCGGGCGCTCATGGAAGTGCTCTCCCTCAAGGGGGTGGAGACGGTCCCCTTTGCCTATCCCCATGACCGGCAGCCGGA GAGCATCCGGTTCGAAATCGAGAAGCTCATGCGCCATTTCGGCGTGGGATGGGACGCGGTCAACCTCTCCCGGGAACGGC TGGGGCGCATCCGGCGCAAAGTCAGGGAAATCGACCGTCTCACCTGGGAGGAGAACCGGGTGACCGGCGCGGAAAACCAC TACTATCAAGTCTGCACGTCGGACATGAACAGCGATCCGGACCGCTTCGAGGCCGACGTGGACGCCTTCCTGGCCGAGGC GAAAAACCGCACCCCCTTCAAGGACACGCTGCGGCTCGCCTACATCGGGGTCCCCCCCATCTTCGACGACCTTTACCAGT TCACGGAGAGCCTGGGGGCACGGGTGGTGTTCAATGAAACCCAGCGCCAGTTCGCCATGCCCTACGACACGCAGGACATG GTTGAGCAGTACCATGTTTACACCTATCCCTATGACATCTTCCACCGCCTCTCCGACATCCTTCTGGAGCTGGAGCGGCG CAAGGTGGACGCGGTCATCCACTACGTCCAGTCCTTCTGCTTCCGGCAGATCGAGGACATGATCGTGCGCCAGAAGGTGC CTCTCCCCATCCTGACCCTAGAGGGGGACAAGCCGACCCCCCTGGACGCCCGCACAAAAATCCGGATCGAGGGATTCCTC GAAATGCTGGCAGGGTAA
Upstream 100 bases:
>100_bases AACGAACTTTCCCTCAGCTCCACCCTCCCCTTTGCCTTTGGCGGGCTCGTGATTGGCGGCTTCCTCATCTATTTCCTCTT CATCAAATCGGAGTAGCCCC
Downstream 100 bases:
>100_bases CGAACTATGCGGATCGGCATAGATTTGGGAAGCAGAAAAGCCAAGTTCGCCCTCCTGGACGGGGAGCGGATCGTGCGACT GGCGGACCACGACACCGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: 2-Hydroxyglutaryl-CoA Dehydratase Subunit; Benzoyl-CoA Reductase/2-Hydroxyglutaryl-CoA Dehydratase; 2-Hydroxyglutaryl-CoA Dehydratase Subunit D; 2-Hydroxyglutaryl-Coa Dehydratase Subunit
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MHRVGFTTTIPLEVILAAEKVPVDLNNVFITSPRSHQLIEEAEVDGFPRSTCSWIKGMYAAILEKGIKELIAVTEGDCSN TRALMEVLSLKGVETVPFAYPHDRQPESIRFEIEKLMRHFGVGWDAVNLSRERLGRIRRKVREIDRLTWEENRVTGAENH YYQVCTSDMNSDPDRFEADVDAFLAEAKNRTPFKDTLRLAYIGVPPIFDDLYQFTESLGARVVFNETQRQFAMPYDTQDM VEQYHVYTYPYDIFHRLSDILLELERRKVDAVIHYVQSFCFRQIEDMIVRQKVPLPILTLEGDKPTPLDARTKIRIEGFL EMLAG
Sequences:
>Translated_325_residues MHRVGFTTTIPLEVILAAEKVPVDLNNVFITSPRSHQLIEEAEVDGFPRSTCSWIKGMYAAILEKGIKELIAVTEGDCSN TRALMEVLSLKGVETVPFAYPHDRQPESIRFEIEKLMRHFGVGWDAVNLSRERLGRIRRKVREIDRLTWEENRVTGAENH YYQVCTSDMNSDPDRFEADVDAFLAEAKNRTPFKDTLRLAYIGVPPIFDDLYQFTESLGARVVFNETQRQFAMPYDTQDM VEQYHVYTYPYDIFHRLSDILLELERRKVDAVIHYVQSFCFRQIEDMIVRQKVPLPILTLEGDKPTPLDARTKIRIEGFL EMLAG >Mature_325_residues MHRVGFTTTIPLEVILAAEKVPVDLNNVFITSPRSHQLIEEAEVDGFPRSTCSWIKGMYAAILEKGIKELIAVTEGDCSN TRALMEVLSLKGVETVPFAYPHDRQPESIRFEIEKLMRHFGVGWDAVNLSRERLGRIRRKVREIDRLTWEENRVTGAENH YYQVCTSDMNSDPDRFEADVDAFLAEAKNRTPFKDTLRLAYIGVPPIFDDLYQFTESLGARVVFNETQRQFAMPYDTQDM VEQYHVYTYPYDIFHRLSDILLELERRKVDAVIHYVQSFCFRQIEDMIVRQKVPLPILTLEGDKPTPLDARTKIRIEGFL EMLAG
Specific function: Unknown
COG id: COG1775
COG function: function code E; Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37642; Mature: 37642
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRVGFTTTIPLEVILAAEKVPVDLNNVFITSPRSHQLIEEAEVDGFPRSTCSWIKGMYA CCCCCCCEECHHHHEEECCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHH AILEKGIKELIAVTEGDCSNTRALMEVLSLKGVETVPFAYPHDRQPESIRFEIEKLMRHF HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH GVGWDAVNLSRERLGRIRRKVREIDRLTWEENRVTGAENHYYQVCTSDMNSDPDRFEADV CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHH DAFLAEAKNRTPFKDTLRLAYIGVPPIFDDLYQFTESLGARVVFNETQRQFAMPYDTQDM HHHHHHHCCCCCHHHHHEEEEECCCHHHHHHHHHHHHHCCEEEEECHHHHHCCCCCHHHH VEQYHVYTYPYDIFHRLSDILLELERRKVDAVIHYVQSFCFRQIEDMIVRQKVPLPILTL HHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE EGDKPTPLDARTKIRIEGFLEMLAG CCCCCCCCCCCCEEHHHHHHHHHCC >Mature Secondary Structure MHRVGFTTTIPLEVILAAEKVPVDLNNVFITSPRSHQLIEEAEVDGFPRSTCSWIKGMYA CCCCCCCEECHHHHEEECCCCCCCCCCEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHH AILEKGIKELIAVTEGDCSNTRALMEVLSLKGVETVPFAYPHDRQPESIRFEIEKLMRHF HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH GVGWDAVNLSRERLGRIRRKVREIDRLTWEENRVTGAENHYYQVCTSDMNSDPDRFEADV CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHH DAFLAEAKNRTPFKDTLRLAYIGVPPIFDDLYQFTESLGARVVFNETQRQFAMPYDTQDM HHHHHHHCCCCCHHHHHEEEEECCCHHHHHHHHHHHHHCCEEEEECHHHHHCCCCCHHHH VEQYHVYTYPYDIFHRLSDILLELERRKVDAVIHYVQSFCFRQIEDMIVRQKVPLPILTL HHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEE EGDKPTPLDARTKIRIEGFLEMLAG CCCCCCCCCCCCEEHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA