| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221763
Identifier: 78221763
GI number: 78221763
Start: 580657
End: 581247
Strand: Reverse
Name: 78221763
Synonym: Gmet_0542
Alternate gene names: NA
Gene position: 581247-580657 (Counterclockwise)
Preceding gene: 78221764
Following gene: 78221761
Centisome position: 14.54
GC content: 61.42
Gene sequence:
>591_bases ATGGGGGGGACCGTCCTTAATCTCACCCGTGAACTGGAACAGCTCGTAACCCACATCGCGGGCCACGTTCCGGAGATGTG CCACATCGATCCGTCCCGGCTCCTGATCTGCATCTCGTCAACCCGGAGCGGGGGCATCCGGGGAACATACGCCAAGATCC ACCCCCTCCGGTTCCCCGGAGGGGCGAAGAGCATCGAACGGCAGCGGGGTCGCCACACCTACCGGAGCACCATGCCGTCA GTGACCCACCGGGGCAATGAAATCCTCTACGTCATCTACTTCCTGGTCCCCCGCTTTTTCGACCTCACCCCCAGGGAAAA ACTCATCACCATCTTCCACGAACTCTTCCACATCTCGCCCGCCTTCGACGGCGACATCCGCCGCTTTCCGGGCCGCAATT TCGCCCACGGCAGCTCCACGCGAAAGTTCAACGCATACATGGGAACCCTCGTGGATGCCTACCTGGCAGAGCACGGGGAA CCGGCTATCCCGGCCTTTCTCGACGGCACCATGGCGGAACTACGCAACCGCCACCACACCATCGTGGGGAGAAGGTTCCG CATCCCGTTGATAAAAACGGAACGGTGCTAA
Upstream 100 bases:
>100_bases CGGCATCCCCTTCCCCAAGGAACACCCGGTGAAACCGGCCGACGGCCCCATGCGCTGCCTGTTCTGCCACAAATTCAAGT CGAAGTAATCTGCCTGCGCC
Downstream 100 bases:
>100_bases TCGATTTTCAGCATCTCTGTCAGTTGTTTTTTTTCAGTGAGAGAAAGGCGCACCGGCGGCATCGGGGTGTCCGGCCGCAC GGCCCTGGGATTGTCGAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MGGTVLNLTRELEQLVTHIAGHVPEMCHIDPSRLLICISSTRSGGIRGTYAKIHPLRFPGGAKSIERQRGRHTYRSTMPS VTHRGNEILYVIYFLVPRFFDLTPREKLITIFHELFHISPAFDGDIRRFPGRNFAHGSSTRKFNAYMGTLVDAYLAEHGE PAIPAFLDGTMAELRNRHHTIVGRRFRIPLIKTERC
Sequences:
>Translated_196_residues MGGTVLNLTRELEQLVTHIAGHVPEMCHIDPSRLLICISSTRSGGIRGTYAKIHPLRFPGGAKSIERQRGRHTYRSTMPS VTHRGNEILYVIYFLVPRFFDLTPREKLITIFHELFHISPAFDGDIRRFPGRNFAHGSSTRKFNAYMGTLVDAYLAEHGE PAIPAFLDGTMAELRNRHHTIVGRRFRIPLIKTERC >Mature_195_residues GGTVLNLTRELEQLVTHIAGHVPEMCHIDPSRLLICISSTRSGGIRGTYAKIHPLRFPGGAKSIERQRGRHTYRSTMPSV THRGNEILYVIYFLVPRFFDLTPREKLITIFHELFHISPAFDGDIRRFPGRNFAHGSSTRKFNAYMGTLVDAYLAEHGEP AIPAFLDGTMAELRNRHHTIVGRRFRIPLIKTERC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22334; Mature: 22203
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGTVLNLTRELEQLVTHIAGHVPEMCHIDPSRLLICISSTRSGGIRGTYAKIHPLRFPG CCCHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHEEEEEECCCCCCCCCCCEEEEEEECCC GAKSIERQRGRHTYRSTMPSVTHRGNEILYVIYFLVPRFFDLTPREKLITIFHELFHISP CHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC AFDGDIRRFPGRNFAHGSSTRKFNAYMGTLVDAYLAEHGEPAIPAFLDGTMAELRNRHHT CCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH IVGRRFRIPLIKTERC HHCCEEECCEEECCCC >Mature Secondary Structure GGTVLNLTRELEQLVTHIAGHVPEMCHIDPSRLLICISSTRSGGIRGTYAKIHPLRFPG CCHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHEEEEEECCCCCCCCCCCEEEEEEECCC GAKSIERQRGRHTYRSTMPSVTHRGNEILYVIYFLVPRFFDLTPREKLITIFHELFHISP CHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC AFDGDIRRFPGRNFAHGSSTRKFNAYMGTLVDAYLAEHGEPAIPAFLDGTMAELRNRHHT CCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH IVGRRFRIPLIKTERC HHCCEEECCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA