Definition Geobacter metallireducens GS-15 chromosome, complete genome.
Accession NC_007517
Length 3,997,420

Click here to switch to the map view.

The map label for this gene is 78221761

Identifier: 78221761

GI number: 78221761

Start: 579122

End: 579970

Strand: Reverse

Name: 78221761

Synonym: Gmet_0540

Alternate gene names: NA

Gene position: 579970-579122 (Counterclockwise)

Preceding gene: 78221763

Following gene: 78221751

Centisome position: 14.51

GC content: 64.78

Gene sequence:

>849_bases
ATGGGACGGGTGGCAGGAGAGGCACCCCTCGCCCGGCGCTTTCCCCACGCAGGCGGCAAGCACCAGGCAGAGCAGGATCA
GAAGGGGGAGACGAGCGACCAATTTTCCCCCCTGAAGAACATGGCCAGGACCGTCATTGACACGATGGCCGCAAAGACGG
CGATGGTGGTCCAGGCAGCGGCGCGGTTCCCCTCACCAAACCAGACGGCGCGCTCGGGGCGGTGCATACCGAGCCACGGC
AGGGCCAGGAACCAGAGGGAGAGCCCCACGATGATCCAGGCAAAGCCGTTGCCGTGGCTCACCACCTCCTGGGTCCAGAG
GAGAAACCAGGCCGATTTGGCAGGATTCGGCGGCGCGCCCGGATTCGCTGGGTCCAGAAGCGGCGCAGGGATAACCATGG
CCAGCAGCGCCAGGGCCACCAGCCCCCCCCAGAAAGCCCGCTTGACGAGGCGAAAAAAGTGGGGGGAACTCCTTACGTAT
TCGCCACTGCCGCGCGGTCCCCGCCTCAAGTCGTTTTTCACTTCCATCCTTTCAGCCATTGAGCCCTCACAGATACGGCA
GTATCCCCTTTGTCTTGCGCACCCGGTAGAAGTGGAGAAACGACAGGGCCAGCACCGCCACGGGGACAACTACCACATGG
AGCGCGTAAAAGCGCAGCAGCGACAGGGGTTCCCCCACTCCGTCGGGGACGAGGACGGCCTTCAGCCACGGACCTCCAGG
CAGGGTGGCCAGAAGCTCCATACCGGTTCGGGTCGCCCAGAAGGCCAACTGGTCCATGGGGAGGAGATAGCCGGTGTACG
CCTCGAACACCGACAGCGCCAGAAGCCCCACCCCCACCACCCAGGTTAG

Upstream 100 bases:

>100_bases
GGGCAAGTTCCGCCGGAATGAGCCGATGGTGGGCAATGGCTTTGCGGACGCTCTTCCCGTTCCCCCGGTGGCAGGAGACA
CAACTCCCCCGCTCGGCGTA

Downstream 100 bases:

>100_bases
CTCCCGCGGCGGCCGGTAGGCGCCGGAGAGCACCACCCGAAGGACATGGAGGAACAGCAGGACCAAAAGTCCGTGGGAGG
CAAGCCGGTGGAGTCCCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MGRVAGEAPLARRFPHAGGKHQAEQDQKGETSDQFSPLKNMARTVIDTMAAKTAMVVQAAARFPSPNQTARSGRCIPSHG
RARNQRESPTMIQAKPLPWLTTSWVQRRNQADLAGFGGAPGFAGSRSGAGITMASSARATSPPQKARLTRRKKWGELLTY
SPLPRGPRLKSFFTSILSAIEPSQIRQYPLCLAHPVEVEKRQGQHRHGDNYHMERVKAQQRQGFPHSVGDEDGLQPRTSR
QGGQKLHTGSGRPEGQLVHGEEIAGVRLEHRQRQKPHPHHPG

Sequences:

>Translated_282_residues
MGRVAGEAPLARRFPHAGGKHQAEQDQKGETSDQFSPLKNMARTVIDTMAAKTAMVVQAAARFPSPNQTARSGRCIPSHG
RARNQRESPTMIQAKPLPWLTTSWVQRRNQADLAGFGGAPGFAGSRSGAGITMASSARATSPPQKARLTRRKKWGELLTY
SPLPRGPRLKSFFTSILSAIEPSQIRQYPLCLAHPVEVEKRQGQHRHGDNYHMERVKAQQRQGFPHSVGDEDGLQPRTSR
QGGQKLHTGSGRPEGQLVHGEEIAGVRLEHRQRQKPHPHHPG
>Mature_281_residues
GRVAGEAPLARRFPHAGGKHQAEQDQKGETSDQFSPLKNMARTVIDTMAAKTAMVVQAAARFPSPNQTARSGRCIPSHGR
ARNQRESPTMIQAKPLPWLTTSWVQRRNQADLAGFGGAPGFAGSRSGAGITMASSARATSPPQKARLTRRKKWGELLTYS
PLPRGPRLKSFFTSILSAIEPSQIRQYPLCLAHPVEVEKRQGQHRHGDNYHMERVKAQQRQGFPHSVGDEDGLQPRTSRQ
GGQKLHTGSGRPEGQLVHGEEIAGVRLEHRQRQKPHPHHPG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31053; Mature: 30921

Theoretical pI: Translated: 11.74; Mature: 11.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRVAGEAPLARRFPHAGGKHQAEQDQKGETSDQFSPLKNMARTVIDTMAAKTAMVVQAA
CCCCCCCCCHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARFPSPNQTARSGRCIPSHGRARNQRESPTMIQAKPLPWLTTSWVQRRNQADLAGFGGAP
HHCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCC
GFAGSRSGAGITMASSARATSPPQKARLTRRKKWGELLTYSPLPRGPRLKSFFTSILSAI
CCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHC
EPSQIRQYPLCLAHPVEVEKRQGQHRHGDNYHMERVKAQQRQGFPHSVGDEDGLQPRTSR
CHHHHHHCCCHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH
QGGQKLHTGSGRPEGQLVHGEEIAGVRLEHRQRQKPHPHHPG
CCCCEECCCCCCCCCEEECCCCCCCCHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
GRVAGEAPLARRFPHAGGKHQAEQDQKGETSDQFSPLKNMARTVIDTMAAKTAMVVQAA
CCCCCCCCHHHHCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARFPSPNQTARSGRCIPSHGRARNQRESPTMIQAKPLPWLTTSWVQRRNQADLAGFGGAP
HHCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCC
GFAGSRSGAGITMASSARATSPPQKARLTRRKKWGELLTYSPLPRGPRLKSFFTSILSAI
CCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHC
EPSQIRQYPLCLAHPVEVEKRQGQHRHGDNYHMERVKAQQRQGFPHSVGDEDGLQPRTSR
CHHHHHHCCCHHCCCCHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH
QGGQKLHTGSGRPEGQLVHGEEIAGVRLEHRQRQKPHPHHPG
CCCCEECCCCCCCCCEEECCCCCCCCHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA