| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is 78221753
Identifier: 78221753
GI number: 78221753
Start: 572210
End: 573457
Strand: Direct
Name: 78221753
Synonym: Gmet_0532
Alternate gene names: NA
Gene position: 572210-573457 (Clockwise)
Preceding gene: 78221752
Following gene: 78221754
Centisome position: 14.31
GC content: 56.97
Gene sequence:
>1248_bases ATGATTAATATGCGCAAGATATCCACCATCTCCGGCGTCGCCCTCGGTACGGCACTGCTGGCAGGCACGGCCTTTGCCGG CCCCCGCATTACCTTCGGACCTGAGGACCAGGGCGCCCTCCAGATCGACTACAAGGGGCAGTTCCAGATGACGGTTCGCG ACAACGGTTCCGGCGCTGACGGCAACAGCACCACCACCAACTTCAACTTCCGCCGCAACCGTCTCGCCTTCATGGGCAAG TACGGTGACATGGTGAGCCTCTATGTCCAGACCGAGTTCACCGAGGACCCCAATGTCGGCACCCTCGGTGTTTCCGACCA GAGTGCCAACACCGAATTCCAGTTGCTGGACGCAGTTGTGCGGTTCAAACTCAACGATGCCTTCCGGGTCAACGTGGGCA AGTTCAAGTACGGCTTCTCCCGTGAGAACCTCGAGGCGTGCGAGATGCCTCTGACCCTCGACCGCTCTCTCTTTATCCGG GCCCCTTTCGTTTCTACCCGCGATATGGGGGTTGGAATCTGGGGTAACGTCCTGGAAGACAAGATCCAGTACCGTGCCGA CGTGATGGAAGGGCGCAAGGCTGGTGATGAAGATGGTAACGGTCACAAATCACCCGACTCCAGCTTCCGTTATACGTTCC GGGGTCATGTGTCGCTGCTGGATCCCGAGTCGGATTATGGCTATAAGGGGACCTACATGGGCAAGAAGCAGGTTCTCACC TTTGGCGCTGCCTACCAGTTCGAGCCCGACGTGGTGTACGGCAACCCCGCAGCCAAATCCGACAAGAAAGATTACCAGGC ATGGACCGTTGACGGCTTCTTCGAGTATCCCGTGGAAGCGGTCGGAACCTTCACCCTGTCGGCCGCCTATGCGGACTATG ACCTGGACAAATCCTACAATACGGCCATAAACGCTCTGACTGAGCCTGATAAAGACGCAATTGGCCTCAATGGCGAGAAG AACGGCTGGTACATGAAGGCCGGCTACATGCTTCCCAACCTGCCGCTCCAGTTCTTCGGTCGCTATGAGAAGTGGAGTTT CGCCATGCTCAACAATATCTACGATCAGGACGTTACCTGGTACGGCGGCGGGGTTAATTACTACATCTGGGGCCAGAACC TGAAGCTCACGGCTGAAATCAGCCGAACCGATTTCGACAAGGAAGGGGTGGCGAGCGGCATCCAGGGAACTAACCTGAAG ACCGAGGACTTCACCACCTTCGTAACACAGCTCCAGCTTCTCTTCTAG
Upstream 100 bases:
>100_bases CAGGCGGCGGTGGTGGCGGCGGCTGCTAGAAGCGAGTTGTGATATCCCTGACACCCCCGCCCGACGGGGCGGGGGATCTA CCATGAAAAGGAGCGAATGC
Downstream 100 bases:
>100_bases GACGGAGCGCAACCCAATTCACGCAGGAGGAAAAGAGAATGAAAAAAATCATGATGTCCATCGCAGCAGCCCTTGTGGCG GTTTCAATGGCGGCCGTTGC
Product: phosphate-selective porin O and P
Products: NA
Alternate protein names: Outer Membrane Porin FmdC; Phosphate-Selective Porin O And P Superfamily Protein
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MINMRKISTISGVALGTALLAGTAFAGPRITFGPEDQGALQIDYKGQFQMTVRDNGSGADGNSTTTNFNFRRNRLAFMGK YGDMVSLYVQTEFTEDPNVGTLGVSDQSANTEFQLLDAVVRFKLNDAFRVNVGKFKYGFSRENLEACEMPLTLDRSLFIR APFVSTRDMGVGIWGNVLEDKIQYRADVMEGRKAGDEDGNGHKSPDSSFRYTFRGHVSLLDPESDYGYKGTYMGKKQVLT FGAAYQFEPDVVYGNPAAKSDKKDYQAWTVDGFFEYPVEAVGTFTLSAAYADYDLDKSYNTAINALTEPDKDAIGLNGEK NGWYMKAGYMLPNLPLQFFGRYEKWSFAMLNNIYDQDVTWYGGGVNYYIWGQNLKLTAEISRTDFDKEGVASGIQGTNLK TEDFTTFVTQLQLLF
Sequences:
>Translated_415_residues MINMRKISTISGVALGTALLAGTAFAGPRITFGPEDQGALQIDYKGQFQMTVRDNGSGADGNSTTTNFNFRRNRLAFMGK YGDMVSLYVQTEFTEDPNVGTLGVSDQSANTEFQLLDAVVRFKLNDAFRVNVGKFKYGFSRENLEACEMPLTLDRSLFIR APFVSTRDMGVGIWGNVLEDKIQYRADVMEGRKAGDEDGNGHKSPDSSFRYTFRGHVSLLDPESDYGYKGTYMGKKQVLT FGAAYQFEPDVVYGNPAAKSDKKDYQAWTVDGFFEYPVEAVGTFTLSAAYADYDLDKSYNTAINALTEPDKDAIGLNGEK NGWYMKAGYMLPNLPLQFFGRYEKWSFAMLNNIYDQDVTWYGGGVNYYIWGQNLKLTAEISRTDFDKEGVASGIQGTNLK TEDFTTFVTQLQLLF >Mature_415_residues MINMRKISTISGVALGTALLAGTAFAGPRITFGPEDQGALQIDYKGQFQMTVRDNGSGADGNSTTTNFNFRRNRLAFMGK YGDMVSLYVQTEFTEDPNVGTLGVSDQSANTEFQLLDAVVRFKLNDAFRVNVGKFKYGFSRENLEACEMPLTLDRSLFIR APFVSTRDMGVGIWGNVLEDKIQYRADVMEGRKAGDEDGNGHKSPDSSFRYTFRGHVSLLDPESDYGYKGTYMGKKQVLT FGAAYQFEPDVVYGNPAAKSDKKDYQAWTVDGFFEYPVEAVGTFTLSAAYADYDLDKSYNTAINALTEPDKDAIGLNGEK NGWYMKAGYMLPNLPLQFFGRYEKWSFAMLNNIYDQDVTWYGGGVNYYIWGQNLKLTAEISRTDFDKEGVASGIQGTNLK TEDFTTFVTQLQLLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46367; Mature: 46367
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINMRKISTISGVALGTALLAGTAFAGPRITFGPEDQGALQIDYKGQFQMTVRDNGSGAD CCCCEEECHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEECCEEEEEEECCCCCCC GNSTTTNFNFRRNRLAFMGKYGDMVSLYVQTEFTEDPNVGTLGVSDQSANTEFQLLDAVV CCCCEEEEEEECCEEEEEECCCCEEEEEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHH RFKLNDAFRVNVGKFKYGFSRENLEACEMPLTLDRSLFIRAPFVSTRDMGVGIWGNVLED HEECCCEEEEEECCEEECCCCCCHHHHCCCEEECCEEEEEECCCCCCCCCCCCCHHHHHH KIQYRADVMEGRKAGDEDGNGHKSPDSSFRYTFRGHVSLLDPESDYGYKGTYMGKKQVLT HHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCEEECCCEEEEE FGAAYQFEPDVVYGNPAAKSDKKDYQAWTVDGFFEYPVEAVGTFTLSAAYADYDLDKSYN EEEEEEECCCEEECCCCCCCCCCCCEEEEECCHHHCCHHHHEEEEEEEEEECCCCCCCCC TAINALTEPDKDAIGLNGEKNGWYMKAGYMLPNLPLQFFGRYEKWSFAMLNNIYDQDVTW HHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHCCCCCCCHHHHHHHHCCCCCEE YGGGVNYYIWGQNLKLTAEISRTDFDKEGVASGIQGTNLKTEDFTTFVTQLQLLF ECCCEEEEEECCCEEEEEEECCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MINMRKISTISGVALGTALLAGTAFAGPRITFGPEDQGALQIDYKGQFQMTVRDNGSGAD CCCCEEECHHHHHHHHHHHHHCCCCCCCEEEECCCCCCEEEEEECCEEEEEEECCCCCCC GNSTTTNFNFRRNRLAFMGKYGDMVSLYVQTEFTEDPNVGTLGVSDQSANTEFQLLDAVV CCCCEEEEEEECCEEEEEECCCCEEEEEEEEECCCCCCCCEEECCCCCCCCHHHHHHHHH RFKLNDAFRVNVGKFKYGFSRENLEACEMPLTLDRSLFIRAPFVSTRDMGVGIWGNVLED HEECCCEEEEEECCEEECCCCCCHHHHCCCEEECCEEEEEECCCCCCCCCCCCCHHHHHH KIQYRADVMEGRKAGDEDGNGHKSPDSSFRYTFRGHVSLLDPESDYGYKGTYMGKKQVLT HHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCEEECCCEEEEE FGAAYQFEPDVVYGNPAAKSDKKDYQAWTVDGFFEYPVEAVGTFTLSAAYADYDLDKSYN EEEEEEECCCEEECCCCCCCCCCCCEEEEECCHHHCCHHHHEEEEEEEEEECCCCCCCCC TAINALTEPDKDAIGLNGEKNGWYMKAGYMLPNLPLQFFGRYEKWSFAMLNNIYDQDVTW HHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHCCCCCCCHHHHHHHHCCCCCEE YGGGVNYYIWGQNLKLTAEISRTDFDKEGVASGIQGTNLKTEDFTTFVTQLQLLF ECCCEEEEEECCCEEEEEEECCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA