| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is 78221752
Identifier: 78221752
GI number: 78221752
Start: 570801
End: 572138
Strand: Direct
Name: 78221752
Synonym: Gmet_0531
Alternate gene names: NA
Gene position: 570801-572138 (Clockwise)
Preceding gene: 78221735
Following gene: 78221753
Centisome position: 14.28
GC content: 58.74
Gene sequence:
>1338_bases ATGGCGAAACAGGCATGGAGGAAGGGACGCATCATTCTGAGCGGCATGCTCGGCGTGGTTGCGCTGGCTATGCTGACGTT GTGGGGCTGCGGCGGGGGCGGGGGGAAAAGCTATGACACGCCCAGTCTGAACGGGCCTGCTCCGGTGGCGACGAAGACCG CTACTCCGCTGGTCGACGCGGTGACGCTCAAGGGATGGCTCGATGCCGGGCTGGTAAACAAGGCGGCAGGAAGTGAGCGG GTTGTCATCCTCGAGTTTTCAGGTAGCTACGTAGATACTAGCGTTACGCCGAATGTGACCAAGCTTCGCTACAACGATGG TCACATTCCCGGGGCGATCAGGGTTGATCTGACGGCTGAACTGATGGCAAACCGTGTTGAAGGGCCTGCCGAGTTCGCCC AGATGGTGGCCAGCGGCGCGCAGATGGACGCGCTCATCAAGCGGTGCGGCATCGACGAGAATACAACCATTGTTTTTACG ACCTCTGAAGCGGAGATGAACTCCAATACCCTCTGGAATATTACCCGCCCCTATACTACGTTCCGCTACTGGGGCTTCCC AAAAGAGCGTCTGAAGGTGCTTGACGGCGGCAACAAGGCTTGGGTTGCGGCTGCCTATCCCATGACAACGGTTGCTCCGA CCATCACCGCTTCCACGTACAATGTGACTCCCCTCAATACCAACAGGGTCAAGGCAAATCTACGCGCATCGCTCTCTGAG ATGATTGCGGCGGTGAATGCCGGTACTGGCCTGATCATCGATGGCAGGACCGATGGCGTTCCCGGTTCAACGACCGATCT GGTTGAAAGTTCCAAATATGTGGTCTTCGAAGGGCGGATGACCGGCGGCAGCGGGTACTCACATGTGAACCTTGTTGATG CAACGACTAAAAAATTCAAGGATCCCGCCGTTGTCGCGGCGGATATGACCACCAAAGGGCTCGATCTTACGAAGAATACC ATCTATGCCATGTGCCGTGCAGGCAACATCGCGTCGGCCCTGTTCTTCTACTTTGACGGTATTCTCTACAACGACGGATC CAAGAACGTCGTCTGGTACGACGGCTCCTGGGGACAGTGGGGCCTCATGTCGGATAACGCGGCCAAGGGAGGCAAGCTCC CTGTCGGTTCCGCCTGGGCGACCGATTCCCTTACGCTGCCCATCACGTATGATGCCGACCTTGGCCGTACGGTGGTTGAC ATCACCTACCGCCTTGATCCCACTGTGTCCCATGCCACGGCAACCGCCAACCAGATCGAAGATGCCGACAAGGCCTACCT GAGCCCGGTCACGTCCGGTGGCGGTGGCGCAGGCGGCGGTGGTGGCGGCGGCTGCTAG
Upstream 100 bases:
>100_bases TTAGGATTGCTTATGTTAAAGCATCTTATACGAAGATGCATTATTGCTGGCCGGGAATTGGAAGCCCGGTGAACCATCAT TACTGAGTGAAGGAGGTAGT
Downstream 100 bases:
>100_bases AAGCGAGTTGTGATATCCCTGACACCCCCGCCCGACGGGGCGGGGGATCTACCATGAAAAGGAGCGAATGCATGATTAAT ATGCGCAAGATATCCACCAT
Product: rhodanese-like protein
Products: NA
Alternate protein names: Rhodanese-like protein [H]
Number of amino acids: Translated: 445; Mature: 444
Protein sequence:
>445_residues MAKQAWRKGRIILSGMLGVVALAMLTLWGCGGGGGKSYDTPSLNGPAPVATKTATPLVDAVTLKGWLDAGLVNKAAGSER VVILEFSGSYVDTSVTPNVTKLRYNDGHIPGAIRVDLTAELMANRVEGPAEFAQMVASGAQMDALIKRCGIDENTTIVFT TSEAEMNSNTLWNITRPYTTFRYWGFPKERLKVLDGGNKAWVAAAYPMTTVAPTITASTYNVTPLNTNRVKANLRASLSE MIAAVNAGTGLIIDGRTDGVPGSTTDLVESSKYVVFEGRMTGGSGYSHVNLVDATTKKFKDPAVVAADMTTKGLDLTKNT IYAMCRAGNIASALFFYFDGILYNDGSKNVVWYDGSWGQWGLMSDNAAKGGKLPVGSAWATDSLTLPITYDADLGRTVVD ITYRLDPTVSHATATANQIEDADKAYLSPVTSGGGGAGGGGGGGC
Sequences:
>Translated_445_residues MAKQAWRKGRIILSGMLGVVALAMLTLWGCGGGGGKSYDTPSLNGPAPVATKTATPLVDAVTLKGWLDAGLVNKAAGSER VVILEFSGSYVDTSVTPNVTKLRYNDGHIPGAIRVDLTAELMANRVEGPAEFAQMVASGAQMDALIKRCGIDENTTIVFT TSEAEMNSNTLWNITRPYTTFRYWGFPKERLKVLDGGNKAWVAAAYPMTTVAPTITASTYNVTPLNTNRVKANLRASLSE MIAAVNAGTGLIIDGRTDGVPGSTTDLVESSKYVVFEGRMTGGSGYSHVNLVDATTKKFKDPAVVAADMTTKGLDLTKNT IYAMCRAGNIASALFFYFDGILYNDGSKNVVWYDGSWGQWGLMSDNAAKGGKLPVGSAWATDSLTLPITYDADLGRTVVD ITYRLDPTVSHATATANQIEDADKAYLSPVTSGGGGAGGGGGGGC >Mature_444_residues AKQAWRKGRIILSGMLGVVALAMLTLWGCGGGGGKSYDTPSLNGPAPVATKTATPLVDAVTLKGWLDAGLVNKAAGSERV VILEFSGSYVDTSVTPNVTKLRYNDGHIPGAIRVDLTAELMANRVEGPAEFAQMVASGAQMDALIKRCGIDENTTIVFTT SEAEMNSNTLWNITRPYTTFRYWGFPKERLKVLDGGNKAWVAAAYPMTTVAPTITASTYNVTPLNTNRVKANLRASLSEM IAAVNAGTGLIIDGRTDGVPGSTTDLVESSKYVVFEGRMTGGSGYSHVNLVDATTKKFKDPAVVAADMTTKGLDLTKNTI YAMCRAGNIASALFFYFDGILYNDGSKNVVWYDGSWGQWGLMSDNAAKGGKLPVGSAWATDSLTLPITYDADLGRTVVDI TYRLDPTVSHATATANQIEDADKAYLSPVTSGGGGAGGGGGGGC
Specific function: Unknown
COG id: COG2897
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 rhodanese domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 - InterPro: IPR001307 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: =2.8.1.1 [H]
Molecular weight: Translated: 46810; Mature: 46679
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: PS00888 CNMP_BINDING_1 ; PS00380 RHODANESE_1 ; PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKQAWRKGRIILSGMLGVVALAMLTLWGCGGGGGKSYDTPSLNGPAPVATKTATPLVDA CCCCHHHCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH VTLKGWLDAGLVNKAAGSERVVILEFSGSYVDTSVTPNVTKLRYNDGHIPGAIRVDLTAE EEHHHHHCCCHHHCCCCCCEEEEEEECCCEEECCCCCCEEEEEECCCCCCCEEEEEEEHH LMANRVEGPAEFAQMVASGAQMDALIKRCGIDENTTIVFTTSEAEMNSNTLWNITRPYTT HHHHCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEECCCEE FRYWGFPKERLKVLDGGNKAWVAAAYPMTTVAPTITASTYNVTPLNTNRVKANLRASLSE EEECCCCHHHHEEEECCCEEEEEEECCCHHCCCEEEECEEEECCCCCCHHHHHHHHHHHH MIAAVNAGTGLIIDGRTDGVPGSTTDLVESSKYVVFEGRMTGGSGYSHVNLVDATTKKFK HHHHHCCCCEEEEECCCCCCCCCCHHHHCCCCEEEEEEEECCCCCCCEEEEEECHHHHCC DPAVVAADMTTKGLDLTKNTIYAMCRAGNIASALFFYFDGILYNDGSKNVVWYDGSWGQW CCEEEEECCCCCCCCCCCHHEEEEECCCCHHHHHHHHHCCEEEECCCCEEEEECCCCCCC GLMSDNAAKGGKLPVGSAWATDSLTLPITYDADLGRTVVDITYRLDPTVSHATATANQIE CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCHHHHHHHHHH DADKAYLSPVTSGGGGAGGGGGGGC HCHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AKQAWRKGRIILSGMLGVVALAMLTLWGCGGGGGKSYDTPSLNGPAPVATKTATPLVDA CCCHHHCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH VTLKGWLDAGLVNKAAGSERVVILEFSGSYVDTSVTPNVTKLRYNDGHIPGAIRVDLTAE EEHHHHHCCCHHHCCCCCCEEEEEEECCCEEECCCCCCEEEEEECCCCCCCEEEEEEEHH LMANRVEGPAEFAQMVASGAQMDALIKRCGIDENTTIVFTTSEAEMNSNTLWNITRPYTT HHHHCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEECCCEE FRYWGFPKERLKVLDGGNKAWVAAAYPMTTVAPTITASTYNVTPLNTNRVKANLRASLSE EEECCCCHHHHEEEECCCEEEEEEECCCHHCCCEEEECEEEECCCCCCHHHHHHHHHHHH MIAAVNAGTGLIIDGRTDGVPGSTTDLVESSKYVVFEGRMTGGSGYSHVNLVDATTKKFK HHHHHCCCCEEEEECCCCCCCCCCHHHHCCCCEEEEEEEECCCCCCCEEEEEECHHHHCC DPAVVAADMTTKGLDLTKNTIYAMCRAGNIASALFFYFDGILYNDGSKNVVWYDGSWGQW CCEEEEECCCCCCCCCCCHHEEEEECCCCHHHHHHHHHCCEEEECCCCEEEEECCCCCCC GLMSDNAAKGGKLPVGSAWATDSLTLPITYDADLGRTVVDITYRLDPTVSHATATANQIE CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCHHHHHHHHHH DADKAYLSPVTSGGGGAGGGGGGGC HCHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]