| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
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The map label for this gene is engB
Identifier: 78221686
GI number: 78221686
Start: 512782
End: 513396
Strand: Direct
Name: engB
Synonym: Gmet_0465
Alternate gene names: 78221686
Gene position: 512782-513396 (Clockwise)
Preceding gene: 78221684
Following gene: 78221687
Centisome position: 12.83
GC content: 62.93
Gene sequence:
>615_bases GTGAAGGTATCAAGCGCAGAATTCGTCACGAGCGGCACCAGGCCGGCCCATTACCCGCCGCCGGAACTCCCGGAGGTGGC CTTTGCCGGTCGCTCCAATGTCGGAAAATCGTCACTCATCAATGTCCTCGTGAATCGCAAGGGGCTCGTCAGGACCAGTT CCACCCCCGGTCGGACCCAACTCATCAACTTTTTCCGGGTCAACGGGAGCCTCATGCTGGTGGACCTGCCCGGCTACGGG TTCGCGAAGGTACCCCTGGCAGTGAAGAAGGAATGGGGCCCCATGGTGGAGACCTACCTCTCCACTCGCCCCAACCTGAG TTGCGTAGTCCTCATCGTCGACATTCGCCGGGAGCCCACGGAGGAGGATCAGTTGATGCTCCAGTGGCTGCGGGCCTACA ACGTCGCCGTCCTTGTGGTGGTGACCAAGTGCGACAAGGTGTCCAAGAATGAGCGGGCCAAGCAGGCGGCGATCATCACC CGTACCTTGGGTCTCGCCCGGGACGAGATGGCCTTTTTCTCCGCCCTCTCCAAGGAGGGGCGCGACGAGGTGTGGGCGCG GATCGAGGTGATGCTGGCCGCTGGCCAGGAGGAGGCGGAGGAGTCGGGTGAGTGA
Upstream 100 bases:
>100_bases GTTGCAAATACCTCGCCCATACCTCTATCCGATTGCGCGGAACCCGCCGAGATGGTATGACTGTACCCGGCATCAACAAA GCTCTGACAGGGAGATAACG
Downstream 100 bases:
>100_bases ATGGCACTCCGTTTCAGCCGTTGACATTCAGTCGCCCCCTATGCTAGAACTAGCGGTACAACAAAATACATTTTACGTTC AGGTGCTTTTGCCTCATGGC
Product: ribosome biogenesis GTP-binding protein YsxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 204
Protein sequence:
>204_residues MKVSSAEFVTSGTRPAHYPPPELPEVAFAGRSNVGKSSLINVLVNRKGLVRTSSTPGRTQLINFFRVNGSLMLVDLPGYG FAKVPLAVKKEWGPMVETYLSTRPNLSCVVLIVDIRREPTEEDQLMLQWLRAYNVAVLVVVTKCDKVSKNERAKQAAIIT RTLGLARDEMAFFSALSKEGRDEVWARIEVMLAAGQEEAEESGE
Sequences:
>Translated_204_residues MKVSSAEFVTSGTRPAHYPPPELPEVAFAGRSNVGKSSLINVLVNRKGLVRTSSTPGRTQLINFFRVNGSLMLVDLPGYG FAKVPLAVKKEWGPMVETYLSTRPNLSCVVLIVDIRREPTEEDQLMLQWLRAYNVAVLVVVTKCDKVSKNERAKQAAIIT RTLGLARDEMAFFSALSKEGRDEVWARIEVMLAAGQEEAEESGE >Mature_204_residues MKVSSAEFVTSGTRPAHYPPPELPEVAFAGRSNVGKSSLINVLVNRKGLVRTSSTPGRTQLINFFRVNGSLMLVDLPGYG FAKVPLAVKKEWGPMVETYLSTRPNLSCVVLIVDIRREPTEEDQLMLQWLRAYNVAVLVVVTKCDKVSKNERAKQAAIIT RTLGLARDEMAFFSALSKEGRDEVWARIEVMLAAGQEEAEESGE
Specific function: Necessary for normal cell division and for the maintenance of normal septation
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain
Homologues:
Organism=Homo sapiens, GI56549685, Length=161, Percent_Identity=38.5093167701863, Blast_Score=102, Evalue=2e-22, Organism=Escherichia coli, GI145693205, Length=207, Percent_Identity=41.0628019323672, Blast_Score=152, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6320543, Length=142, Percent_Identity=33.8028169014084, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ENGB_GEOMG (Q39YG6)
Other databases:
- EMBL: CP000148 - RefSeq: YP_383433.1 - HSSP: O57939 - ProteinModelPortal: Q39YG6 - SMR: Q39YG6 - STRING: Q39YG6 - GeneID: 3739832 - GenomeReviews: CP000148_GR - KEGG: gme:Gmet_0465 - NMPDR: fig|269799.3.peg.493 - eggNOG: COG0218 - HOGENOM: HBG447097 - OMA: FIVNYSS - PhylomeDB: Q39YG6 - ProtClustDB: PRK00454 - BioCyc: GMET269799:GMET_0465-MONOMER - GO: GO:0005622 - HAMAP: MF_00321 - InterPro: IPR019987 - InterPro: IPR002917 - InterPro: IPR005225 - TIGRFAMs: TIGR03598 - TIGRFAMs: TIGR00231
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 22554; Mature: 22554
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVSSAEFVTSGTRPAHYPPPELPEVAFAGRSNVGKSSLINVLVNRKGLVRTSSTPGRTQ CCCCCCHHEECCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCEEECCCCCHHH LINFFRVNGSLMLVDLPGYGFAKVPLAVKKEWGPMVETYLSTRPNLSCVVLIVDIRREPT EEEEEEECCEEEEEECCCCCCEECCHHEHHHCCHHHHHHHCCCCCCEEEEEEEECCCCCC EEDQLMLQWLRAYNVAVLVVVTKCDKVSKNERAKQAAIITRTLGLARDEMAFFSALSKEG HHHHHHHHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC RDEVWARIEVMLAAGQEEAEESGE HHHHHHHHHHHHHCCCHHHHHCCC >Mature Secondary Structure MKVSSAEFVTSGTRPAHYPPPELPEVAFAGRSNVGKSSLINVLVNRKGLVRTSSTPGRTQ CCCCCCHHEECCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCEEECCCCCHHH LINFFRVNGSLMLVDLPGYGFAKVPLAVKKEWGPMVETYLSTRPNLSCVVLIVDIRREPT EEEEEEECCEEEEEECCCCCCEECCHHEHHHCCHHHHHHHCCCCCCEEEEEEEECCCCCC EEDQLMLQWLRAYNVAVLVVVTKCDKVSKNERAKQAAIITRTLGLARDEMAFFSALSKEG HHHHHHHHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC RDEVWARIEVMLAAGQEEAEESGE HHHHHHHHHHHHHCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA