| Definition | Geobacter metallireducens GS-15 chromosome, complete genome. |
|---|---|
| Accession | NC_007517 |
| Length | 3,997,420 |
Click here to switch to the map view.
The map label for this gene is 78221685
Identifier: 78221685
GI number: 78221685
Start: 511771
End: 512625
Strand: Reverse
Name: 78221685
Synonym: Gmet_0464
Alternate gene names: NA
Gene position: 512625-511771 (Counterclockwise)
Preceding gene: 78221709
Following gene: 78221683
Centisome position: 12.82
GC content: 59.06
Gene sequence:
>855_bases ATGAACAAAGAACTTGAAACCCTCATCATGTCCGCCGTCGACCTTCCCACGATCCCCGTAGTGGCCACCAAGGTCATCGA ACTGATCGAGCAGGAAGACGTCACCATCGAAAAACTGGCCACTGCAGTCTCCTCCGACCCGGCTGTGGCTGCCCGCATCC TCAAGCTCTCCAACTCGGCCTACTACGGCTGCCAGCGGCAGATCAACACCCTCTCCGCCGCCATCATGCTCCTGGGCTTC AAGACCCTGAAGAGCCTCGTCATCGCCGCATCGCTCAAGCAGCTCAACAGGCGGTTCGGGCTCACGGAGAAGATGCTCTG GGAACATTCCGTCGGCGCGGCCCTGGCGGGAAGGGTCATTGCCACCCAGGGAAGGTTCATCAACGAGGAAACGGGCTTTC TGGTGGGGCTTTTCCACGACCTTGGCAAAACCATTATGAGTAACCGCGACCCCCAGAAGTTCCAGGGGGTGATGATGCGC TGCTACAACGAAGGAATCCCTTTCGCGGAGGCGGAGCGGAGCGTTTACCCGTACTCCCATGCCGAAGTGGGTGCACTGGT CATCCGGAAGTGGAACTTCCCCGAGTCCCTCTCCACCGCCATCATGCACCACCATCAGTTCGGGAGCGCCCCCATCACCG ACCAGTACGACCTCTTCCTCACCGCCACGGCGAGCCTGGCCAACAAGTTCTGCAAGAAACTCGGGATCGGCGACCGGGAT GCCGACGACGACCTGAACCTGACCAATGCACCCGAGGCAATGCTCCTCGGCTTCACTTCCGATACAGCGGAAAAGGCATT GGCAACGTTCCAGGAAACCTTCGAGGAGAACAAGAGTTTCTTCCTGAACGATTGA
Upstream 100 bases:
>100_bases GGTTCCGCGCAATCGGATAGAGGTATGGGCGAGGTATTTGCAACGTACGGTGAGAGACTTTTTTCGCCGCACATTCGCCA CACGCGACAGGTAATATACC
Downstream 100 bases:
>100_bases TGTTAATCGTCAATGGCAACAAAAAACCGCCATAGGCGGTTTTTTGACGCAAACACATATATGAAGTCAGACAAAAAACC GCCCGCTGCCTCAGCATAAT
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MNKELETLIMSAVDLPTIPVVATKVIELIEQEDVTIEKLATAVSSDPAVAARILKLSNSAYYGCQRQINTLSAAIMLLGF KTLKSLVIAASLKQLNRRFGLTEKMLWEHSVGAALAGRVIATQGRFINEETGFLVGLFHDLGKTIMSNRDPQKFQGVMMR CYNEGIPFAEAERSVYPYSHAEVGALVIRKWNFPESLSTAIMHHHQFGSAPITDQYDLFLTATASLANKFCKKLGIGDRD ADDDLNLTNAPEAMLLGFTSDTAEKALATFQETFEENKSFFLND
Sequences:
>Translated_284_residues MNKELETLIMSAVDLPTIPVVATKVIELIEQEDVTIEKLATAVSSDPAVAARILKLSNSAYYGCQRQINTLSAAIMLLGF KTLKSLVIAASLKQLNRRFGLTEKMLWEHSVGAALAGRVIATQGRFINEETGFLVGLFHDLGKTIMSNRDPQKFQGVMMR CYNEGIPFAEAERSVYPYSHAEVGALVIRKWNFPESLSTAIMHHHQFGSAPITDQYDLFLTATASLANKFCKKLGIGDRD ADDDLNLTNAPEAMLLGFTSDTAEKALATFQETFEENKSFFLND >Mature_284_residues MNKELETLIMSAVDLPTIPVVATKVIELIEQEDVTIEKLATAVSSDPAVAARILKLSNSAYYGCQRQINTLSAAIMLLGF KTLKSLVIAASLKQLNRRFGLTEKMLWEHSVGAALAGRVIATQGRFINEETGFLVGLFHDLGKTIMSNRDPQKFQGVMMR CYNEGIPFAEAERSVYPYSHAEVGALVIRKWNFPESLSTAIMHHHQFGSAPITDQYDLFLTATASLANKFCKKLGIGDRD ADDDLNLTNAPEAMLLGFTSDTAEKALATFQETFEENKSFFLND
Specific function: Unknown
COG id: COG1639
COG function: function code T; Predicted signal transduction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR013976 [H]
Pfam domain/function: PF02518 HATPase_c; PF08668 HDOD [H]
EC number: NA
Molecular weight: Translated: 31376; Mature: 31376
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKELETLIMSAVDLPTIPVVATKVIELIEQEDVTIEKLATAVSSDPAVAARILKLSNSA CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCCC YYGCQRQINTLSAAIMLLGFKTLKSLVIAASLKQLNRRFGLTEKMLWEHSVGAALAGRVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH ATQGRFINEETGFLVGLFHDLGKTIMSNRDPQKFQGVMMRCYNEGIPFAEAERSVYPYSH CCCCCEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCC AEVGALVIRKWNFPESLSTAIMHHHQFGSAPITDQYDLFLTATASLANKFCKKLGIGDRD HHHHHHEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHEEEHHHHHHHHHHHHCCCCCCC ADDDLNLTNAPEAMLLGFTSDTAEKALATFQETFEENKSFFLND CCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEECCC >Mature Secondary Structure MNKELETLIMSAVDLPTIPVVATKVIELIEQEDVTIEKLATAVSSDPAVAARILKLSNSA CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCCC YYGCQRQINTLSAAIMLLGFKTLKSLVIAASLKQLNRRFGLTEKMLWEHSVGAALAGRVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH ATQGRFINEETGFLVGLFHDLGKTIMSNRDPQKFQGVMMRCYNEGIPFAEAERSVYPYSH CCCCCEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCC AEVGALVIRKWNFPESLSTAIMHHHQFGSAPITDQYDLFLTATASLANKFCKKLGIGDRD HHHHHHEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHEEEHHHHHHHHHHHHCCCCCCC ADDDLNLTNAPEAMLLGFTSDTAEKALATFQETFEENKSFFLND CCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]