Click here to switch to the map view.

The map label for this gene is hag [H]

Identifier: 78221663

GI number: 78221663

Start: 485967

End: 486911

Strand: Direct

Name: hag [H]

Synonym: Gmet_0442

Alternate gene names: 78221663

Gene position: 485967-486911 (Clockwise)

Preceding gene: 78221662

Following gene: 78221664

Centisome position: 12.16

GC content: 59.26

Gene sequence:

>945_bases
GTGAGGGAAACCTCGCCGGCCACCGCCGGGGCCCAGGCGGAAAATGGCAAGATCGACCTAACGCACACCTTAAAGGGGTA
CGGAAACCCCAAAACAATCTCACGGAGGATTTACACCATGGCACTCACAGTCAACACCAACGTCGCATCCCTCAACGCCC
AACGCAACCTCGCTTCGACCCAGGTATCCCTCAACCAGTCCCTGCAGCGCCTTTCTTCCGGCCTCCGGATCAATAGCGCC
GCCGACGACGCCGCCGGTCTCGCCATTTCCGAGGGGATGAAGGCGAAGATCCGCTCCATGAACCAGGCCGTCCGTAACGC
CAACGACGGTGTGTCTCTTGTGCAGACCGCTGAAGGCGCCCTGAACGAAGTGAGCAACATCCTGGGCCGGATGCGCGAAC
TTTCTACCCAGGCCGCAACCGGCACCCTGACCACCGCTCAGCGTTCCTACATCAACGGTGAATTCCAGCAACTCAGGTCG
GAGATTACCCGTATTGCCGCTGCCACCACGTTCAACGGCACGAACCTTCTCAGCTCCGCCAAGACCATCAAGATTCAGAT
CGGTACCGGCAACAGCTCCTTTGACAAGCTTTCCATTGCCCTGAGCTCCATGAACGCAAGTAACGCACTGCTCGTTAGGG
GCAGCATCGGTGGTGCCAGCGGTGGTATTGCCCAAGCCATGCTCGCAACCCTAGACACGGCGATCGACAAGGTTTCCAAG
ACCCGCGCTGGCCTCGGTGCCATCCAGAACCGCCTCCAGTCCACCATCAACAACCTGCAGGTTGCCGTGGAGAATACCTC
GGCTGCACAATCCCGGATTGCCGACGCCGATATCGCGTCGGAAACCGCTGCCATGACTCGTGCCAATATCTTGACTCAGG
CAGGCACCTCTATTCTGGCACAAGCCAACCAGGCTCCGCAGACAGCTTTGAGCCTGCTTCGCTAA

Upstream 100 bases:

>100_bases
GACGCCCGTCGGGAGGCTTTTTTGCAAAAAATCAGTAAATGTAATTTTTTTTCTAAAGTTTTTTTTGCCCCTGCCGATAA
CGTTACCAAGAGCAGCAAGC

Downstream 100 bases:

>100_bases
AACACGTTGACACTGCAGTAGTAAAGAGGGGTGGGCTTTGTTCCCCCCCCTCTTTTTTGGTTCTTCAGGGAATTCCGGGG
AAGATTAATAAACAACAACG

Product: flagellin-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MRETSPATAGAQAENGKIDLTHTLKGYGNPKTISRRIYTMALTVNTNVASLNAQRNLASTQVSLNQSLQRLSSGLRINSA
ADDAAGLAISEGMKAKIRSMNQAVRNANDGVSLVQTAEGALNEVSNILGRMRELSTQAATGTLTTAQRSYINGEFQQLRS
EITRIAAATTFNGTNLLSSAKTIKIQIGTGNSSFDKLSIALSSMNASNALLVRGSIGGASGGIAQAMLATLDTAIDKVSK
TRAGLGAIQNRLQSTINNLQVAVENTSAAQSRIADADIASETAAMTRANILTQAGTSILAQANQAPQTALSLLR

Sequences:

>Translated_314_residues
MRETSPATAGAQAENGKIDLTHTLKGYGNPKTISRRIYTMALTVNTNVASLNAQRNLASTQVSLNQSLQRLSSGLRINSA
ADDAAGLAISEGMKAKIRSMNQAVRNANDGVSLVQTAEGALNEVSNILGRMRELSTQAATGTLTTAQRSYINGEFQQLRS
EITRIAAATTFNGTNLLSSAKTIKIQIGTGNSSFDKLSIALSSMNASNALLVRGSIGGASGGIAQAMLATLDTAIDKVSK
TRAGLGAIQNRLQSTINNLQVAVENTSAAQSRIADADIASETAAMTRANILTQAGTSILAQANQAPQTALSLLR
>Mature_314_residues
MRETSPATAGAQAENGKIDLTHTLKGYGNPKTISRRIYTMALTVNTNVASLNAQRNLASTQVSLNQSLQRLSSGLRINSA
ADDAAGLAISEGMKAKIRSMNQAVRNANDGVSLVQTAEGALNEVSNILGRMRELSTQAATGTLTTAQRSYINGEFQQLRS
EITRIAAATTFNGTNLLSSAKTIKIQIGTGNSSFDKLSIALSSMNASNALLVRGSIGGASGGIAQAMLATLDTAIDKVSK
TRAGLGAIQNRLQSTINNLQVAVENTSAAQSRIADADIASETAAMTRANILTQAGTSILAQANQAPQTALSLLR

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=149, Percent_Identity=49.6644295302013, Blast_Score=137, Evalue=6e-34,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 32664; Mature: 32664

Theoretical pI: Translated: 10.95; Mature: 10.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRETSPATAGAQAENGKIDLTHTLKGYGNPKTISRRIYTMALTVNTNVASLNAQRNLAST
CCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHEEEEEEEEEEECCEEECCCHHHHHHH
QVSLNQSLQRLSSGLRINSAADDAAGLAISEGMKAKIRSMNQAVRNANDGVSLVQTAEGA
HHHHHHHHHHHHCCCEECCCCCCHHCHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LNEVSNILGRMRELSTQAATGTLTTAQRSYINGEFQQLRSEITRIAAATTFNGTNLLSSA
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCHHHHCCC
KTIKIQIGTGNSSFDKLSIALSSMNASNALLVRGSIGGASGGIAQAMLATLDTAIDKVSK
EEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
TRAGLGAIQNRLQSTINNLQVAVENTSAAQSRIADADIASETAAMTRANILTQAGTSILA
HHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
QANQAPQTALSLLR
HCCCCHHHHHHHHC
>Mature Secondary Structure
MRETSPATAGAQAENGKIDLTHTLKGYGNPKTISRRIYTMALTVNTNVASLNAQRNLAST
CCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHEEEEEEEEEEECCEEECCCHHHHHHH
QVSLNQSLQRLSSGLRINSAADDAAGLAISEGMKAKIRSMNQAVRNANDGVSLVQTAEGA
HHHHHHHHHHHHCCCEECCCCCCHHCHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LNEVSNILGRMRELSTQAATGTLTTAQRSYINGEFQQLRSEITRIAAATTFNGTNLLSSA
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCHHHHCCC
KTIKIQIGTGNSSFDKLSIALSSMNASNALLVRGSIGGASGGIAQAMLATLDTAIDKVSK
EEEEEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
TRAGLGAIQNRLQSTINNLQVAVENTSAAQSRIADADIASETAAMTRANILTQAGTSILA
HHHHHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHH
QANQAPQTALSLLR
HCCCCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1479346; 11058132 [H]